Click here to switch to the map view.

The map label for this gene is 145295355

Identifier: 145295355

GI number: 145295355

Start: 1423038

End: 1423730

Strand: Direct

Name: 145295355

Synonym: cgR_1294

Alternate gene names: NA

Gene position: 1423038-1423730 (Clockwise)

Preceding gene: 145295354

Following gene: 145295358

Centisome position: 42.94

GC content: 51.37

Gene sequence:

>693_bases
ATGCGTTTAGTCATCGCCCGTTGCTCAGTTGATTATGTTGGCCGTTTGGAAGCTCATCTTCCGTCCGCCGATCGCCTTTT
GATGGTTAAGGCGGATGGTTCTGTATCCATCCATGCCGATGACCGTGCCTATAAGCCACTGAACTGGATGACACCTCCAT
GTTCTTTAGTTGAAACTCCCATCACTGATGAAGATGGTGAGGCAACAGGTGAGAGCCTGTGGGTTGTGGAGAACAAGAAG
GGGGAGCAGCTCCGCATTACCGTGGAGAAGATCCATTCGGAGCAGAACTTCGACCTCGGTGAGGATCCAGGTCTGGTTAA
AGATGGCGTGGAAGACCATCTGCAAGAGCTTCTTGCAGAGCACATCACTACGTTGGGTGATGGGTACACATTGATTCGTC
GGGAGTATCCAACAGCTATTGGGCCTGTCGATATTTTGTGTCGCAACTCTGACGGCGAGACTGTCGCTGTGGAGATCAAG
CGTCGTGGTGGCATCGACGGCGTTGAGCAGTTGACCAGGTATTTGGAATTGCTCAACCGTGATGAATTGCTCAAGCCTGT
TCATGGAGTGTTTGCAGCCCAGGAGATTAAGCCTCAGGCAAAGACTCTCGCGGAGGATCGTGGCATCAAGTGCGTGACGT
TGGATTATCAAGCGCTTCGTGGCATTGAGTCCAATGAGCTGACATTGTTCTAA

Upstream 100 bases:

>100_bases
GGGCGGAGCATTCATTGAATCCACGTGATTTCAACCGCTTTCGAGCCAGCAAAGACACCCGCAAAAACCGCTAAGTAGCC
GTCATTGTTATGGTGGGTGC

Downstream 100 bases:

>100_bases
GAACATGGGCCGAAAAAATAGAAGAACCAATATTCAGCCAGCTAGGGATCTGCCGGTCGATGGTACCTCCTATTGGGGAA
CTCAAACTCAGGATGGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MRLVIARCSVDYVGRLEAHLPSADRLLMVKADGSVSIHADDRAYKPLNWMTPPCSLVETPITDEDGEATGESLWVVENKK
GEQLRITVEKIHSEQNFDLGEDPGLVKDGVEDHLQELLAEHITTLGDGYTLIRREYPTAIGPVDILCRNSDGETVAVEIK
RRGGIDGVEQLTRYLELLNRDELLKPVHGVFAAQEIKPQAKTLAEDRGIKCVTLDYQALRGIESNELTLF

Sequences:

>Translated_230_residues
MRLVIARCSVDYVGRLEAHLPSADRLLMVKADGSVSIHADDRAYKPLNWMTPPCSLVETPITDEDGEATGESLWVVENKK
GEQLRITVEKIHSEQNFDLGEDPGLVKDGVEDHLQELLAEHITTLGDGYTLIRREYPTAIGPVDILCRNSDGETVAVEIK
RRGGIDGVEQLTRYLELLNRDELLKPVHGVFAAQEIKPQAKTLAEDRGIKCVTLDYQALRGIESNELTLF
>Mature_230_residues
MRLVIARCSVDYVGRLEAHLPSADRLLMVKADGSVSIHADDRAYKPLNWMTPPCSLVETPITDEDGEATGESLWVVENKK
GEQLRITVEKIHSEQNFDLGEDPGLVKDGVEDHLQELLAEHITTLGDGYTLIRREYPTAIGPVDILCRNSDGETVAVEIK
RRGGIDGVEQLTRYLELLNRDELLKPVHGVFAAQEIKPQAKTLAEDRGIKCVTLDYQALRGIESNELTLF

Specific function: Unknown

COG id: COG1637

COG function: function code L; Predicted nuclease of the RecB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0286 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002793 [H]

Pfam domain/function: PF01939 DUF91 [H]

EC number: NA

Molecular weight: Translated: 25616; Mature: 25616

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVIARCSVDYVGRLEAHLPSADRLLMVKADGSVSIHADDRAYKPLNWMTPPCSLVETP
CEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCHHHEECC
ITDEDGEATGESLWVVENKKGEQLRITVEKIHSEQNFDLGEDPGLVKDGVEDHLQELLAE
CCCCCCCCCCCEEEEEECCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
HITTLGDGYTLIRREYPTAIGPVDILCRNSDGETVAVEIKRRGGIDGVEQLTRYLELLNR
HHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCH
DELLKPVHGVFAAQEIKPQAKTLAEDRGIKCVTLDYQALRGIESNELTLF
HHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECHHHHCCCCCCCEEEC
>Mature Secondary Structure
MRLVIARCSVDYVGRLEAHLPSADRLLMVKADGSVSIHADDRAYKPLNWMTPPCSLVETP
CEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCHHHEECC
ITDEDGEATGESLWVVENKKGEQLRITVEKIHSEQNFDLGEDPGLVKDGVEDHLQELLAE
CCCCCCCCCCCEEEEEECCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
HITTLGDGYTLIRREYPTAIGPVDILCRNSDGETVAVEIKRRGGIDGVEQLTRYLELLNR
HHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCH
DELLKPVHGVFAAQEIKPQAKTLAEDRGIKCVTLDYQALRGIESNELTLF
HHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECHHHHCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]