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The map label for this gene is 145295299

Identifier: 145295299

GI number: 145295299

Start: 1355024

End: 1355713

Strand: Reverse

Name: 145295299

Synonym: cgR_1239

Alternate gene names: NA

Gene position: 1355713-1355024 (Counterclockwise)

Preceding gene: 145295303

Following gene: 145295297

Centisome position: 40.91

GC content: 54.06

Gene sequence:

>690_bases
ATGCCCACGCCTTCGCAGCACAAGGACGCTTCAACAGCACAAACCGACAACCAGGTACCAACTGGCCGCCGTGCACAAAA
ACGCGAACAAACCCGCGCGCGCCTGATCACTTCCGCTCGCACACTCATGGCAGAACGGGGTGTCGACAATGTAGGAATAG
CTGAAATCACCGAAGGCGCAAACATCGGAACGGGAACCTTCTACAACTACTTCCCAGACCGTGAACAACTACTCCAAGCT
GTCGCAGAAGATGCCTTTGAATCCGTGGGAACTGCCCTCGACCAGGTGCTAACCAAATTGGACGATCCGGCTGAAGTATT
TGCAGGGTCGCTTCGACATCTTGTACGGCACTCGTTAGAAGATCGGATTTGGGGCGGATTTTTCATACAAATGGGTGCTG
CTCATCCCGTACTCATGCGCATCCTAGGACCCCGCGCACGCCGAGATCTTCTTCACGGTTTAGAGGCCGGCCGATTCACC
ATCGAAGATCTTGATCTAGCAACCACATGCACTTTTGGTTCACTCATCGCAGCGATCCAAATGGCGCTTTCTGCAGATCA
AGATTCCAACGATGACAAAGATCAGATTTTCGCAGCCGCGATGCTCCGGATGGTGGGTGTTCAAGCAGCAGAAGCCCGGG
AGATCGCGTCGCGTCCACTCCCTGAAATATCCCCAGTCAAACCGCAGTAG

Upstream 100 bases:

>100_bases
CTGAATCATGATTCACAAATGAACAAGAATTCAGAATTTACAATACCCCCATTCCACCCCCTTATATTTAAGTCACCGCA
GATCAGCTAAGGTTTTCCCT

Downstream 100 bases:

>100_bases
TGATCGGGCCTCAAATAAACTTCGGCAATAAGCCGAGTTCAATACCTCGCACTCTGACTAGAGAGCAACGCAATGCTCTC
TTCTTTGGTCAGAATCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator; TetR Family Regulator; TetR-Family Protein Transcriptional Regulator; Regulatory Protein TetR

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MPTPSQHKDASTAQTDNQVPTGRRAQKREQTRARLITSARTLMAERGVDNVGIAEITEGANIGTGTFYNYFPDREQLLQA
VAEDAFESVGTALDQVLTKLDDPAEVFAGSLRHLVRHSLEDRIWGGFFIQMGAAHPVLMRILGPRARRDLLHGLEAGRFT
IEDLDLATTCTFGSLIAAIQMALSADQDSNDDKDQIFAAAMLRMVGVQAAEAREIASRPLPEISPVKPQ

Sequences:

>Translated_229_residues
MPTPSQHKDASTAQTDNQVPTGRRAQKREQTRARLITSARTLMAERGVDNVGIAEITEGANIGTGTFYNYFPDREQLLQA
VAEDAFESVGTALDQVLTKLDDPAEVFAGSLRHLVRHSLEDRIWGGFFIQMGAAHPVLMRILGPRARRDLLHGLEAGRFT
IEDLDLATTCTFGSLIAAIQMALSADQDSNDDKDQIFAAAMLRMVGVQAAEAREIASRPLPEISPVKPQ
>Mature_228_residues
PTPSQHKDASTAQTDNQVPTGRRAQKREQTRARLITSARTLMAERGVDNVGIAEITEGANIGTGTFYNYFPDREQLLQAV
AEDAFESVGTALDQVLTKLDDPAEVFAGSLRHLVRHSLEDRIWGGFFIQMGAAHPVLMRILGPRARRDLLHGLEAGRFTI
EDLDLATTCTFGSLIAAIQMALSADQDSNDDKDQIFAAAMLRMVGVQAAEAREIASRPLPEISPVKPQ

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25026; Mature: 24894

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS50977 HTH_TETR_2 ; PS00628 RIBOSOMAL_S19E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPSQHKDASTAQTDNQVPTGRRAQKREQTRARLITSARTLMAERGVDNVGIAEITEGA
CCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC
NIGTGTFYNYFPDREQLLQAVAEDAFESVGTALDQVLTKLDDPAEVFAGSLRHLVRHSLE
CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DRIWGGFFIQMGAAHPVLMRILGPRARRDLLHGLEAGRFTIEDLDLATTCTFGSLIAAIQ
HHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHH
MALSADQDSNDDKDQIFAAAMLRMVGVQAAEAREIASRPLPEISPVKPQ
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PTPSQHKDASTAQTDNQVPTGRRAQKREQTRARLITSARTLMAERGVDNVGIAEITEGA
CCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC
NIGTGTFYNYFPDREQLLQAVAEDAFESVGTALDQVLTKLDDPAEVFAGSLRHLVRHSLE
CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DRIWGGFFIQMGAAHPVLMRILGPRARRDLLHGLEAGRFTIEDLDLATTCTFGSLIAAIQ
HHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHH
MALSADQDSNDDKDQIFAAAMLRMVGVQAAEAREIASRPLPEISPVKPQ
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA