| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145295268
Identifier: 145295268
GI number: 145295268
Start: 1311817
End: 1313109
Strand: Reverse
Name: 145295268
Synonym: cgR_1209
Alternate gene names: NA
Gene position: 1313109-1311817 (Counterclockwise)
Preceding gene: 145295271
Following gene: 145295267
Centisome position: 39.62
GC content: 55.53
Gene sequence:
>1293_bases ATGAGTGGAATTTCCCGACTTTACGTGGGCCGCCTCGCTGGGATGGTGGTCCGAGGCCCCGATACGGATGCTATTGGTCG CGTCCGCGATGTCGTGGTGAATATTCGCCCTTATGGGCATGATTCCCGCGCATTGGGATTAGTGGTTGAGCTAGTTAATA ATAAACGCCGTATTTTTGTCCCCATGTTGCGTATCGCTGCCATTGAACCGAAAGACATTACTTTGGTTACCGGTTCTGTA TCACTTCGAACCTTTCGCGTGCGCACCGGTGAATTGCAGGTCATGGGCGATATTGTGGGTGCAAAAGTACATACCGATGA TCCAGAGCTGCAACAATTCCACGGTCGCGCGGTAGAAATCGCCGATGTGGAGCTGGAGTTATCGCGCACTCGCGATTGGA TCATCACGCGCGTGGCGGTGCTGGGTGAGCGCCCTAAATTTGGCCGGCGCCCAGTGCTGCACACAGTGCCGTGGAGTCAT ATCCACGGCATCACCGCAGGTGGTGTCGGCGAGTCCAATCACACCGCCGAACTCATCGCAGGGTTTGAGGATATGAGGCC TGCGGACGTCGCAAAGCAGCTTTATCAGCTGCCTACGGCTCAGCGTACCGAAGTGACGGAGGAGCTTGACGACGAAAAGC TGGCGGATATCCTGCAGGAATTGTCCGAGGACCGCCAAGCCGAGTTGATTGAAGAATTAGACATCGAACGTGCCGCGGAC ATTCTGGAGGAAATGGATCCAGATGATGCTGCAGACTTGTTGGGTGAGCTGCCTGATGACAAAGCTGATGTGTTGTTGGA TCTGATGGACCCTGAAGAATCTGCGCCGGTGCGTCGTTTGATGGATTTCTCCCCGGACACCGTTGGTGCGCTGATGACTC CTGAGCCATTAATTATGGATCCTTCCACCACAGTCGCTGAAGCGTTGGCGATGGCCAGAAACCCCGACCTTCCTACTTCT TTGGCATCGTTGATCTTTGTGGTGCGCCCACCCACGGCCACGCCTACTGGAAAATACCTCGGCTGCGTGCATCTGCAGAA ACTGCTTCGGGAGCCTCCATCAAGTTTGATTGGTGGCATCCTCGACCCCGATCTGCCACCGCTCTACGCTGATGATTCTC AAGAAACCGCAGCCCGATTCTTTGCCACCTACAACTTGGTGTGCGGCCCCGTCTTGGATGAAAACCGCCATCTGCTTGGT GCCGTAGCTGTCGATGACTTGCTCGACCACATGCTGCCAGAAGACTGGCGCGACGCCGGAATCCGACCAGGAAAGGAGCA CACCCATGGCTGA
Upstream 100 bases:
>100_bases GGGCCGTGGTTGAGTCATCTTTATCATCTTCCTTTTCACTTTTTCAGTTCACATTTACAACGTACACGCTGGTGAAATGG TTCCCGTAGACTAGGCCTTC
Downstream 100 bases:
>100_bases TTTCAACCGCTCCGAATTAGACAGCCCACTTTTTGGATCCCGCAAACGATTTAAATTCGACGATGACACCATTGGTGCCT ACGCCGAAAAAGTAGCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MSGISRLYVGRLAGMVVRGPDTDAIGRVRDVVVNIRPYGHDSRALGLVVELVNNKRRIFVPMLRIAAIEPKDITLVTGSV SLRTFRVRTGELQVMGDIVGAKVHTDDPELQQFHGRAVEIADVELELSRTRDWIITRVAVLGERPKFGRRPVLHTVPWSH IHGITAGGVGESNHTAELIAGFEDMRPADVAKQLYQLPTAQRTEVTEELDDEKLADILQELSEDRQAELIEELDIERAAD ILEEMDPDDAADLLGELPDDKADVLLDLMDPEESAPVRRLMDFSPDTVGALMTPEPLIMDPSTTVAEALAMARNPDLPTS LASLIFVVRPPTATPTGKYLGCVHLQKLLREPPSSLIGGILDPDLPPLYADDSQETAARFFATYNLVCGPVLDENRHLLG AVAVDDLLDHMLPEDWRDAGIRPGKEHTHG
Sequences:
>Translated_430_residues MSGISRLYVGRLAGMVVRGPDTDAIGRVRDVVVNIRPYGHDSRALGLVVELVNNKRRIFVPMLRIAAIEPKDITLVTGSV SLRTFRVRTGELQVMGDIVGAKVHTDDPELQQFHGRAVEIADVELELSRTRDWIITRVAVLGERPKFGRRPVLHTVPWSH IHGITAGGVGESNHTAELIAGFEDMRPADVAKQLYQLPTAQRTEVTEELDDEKLADILQELSEDRQAELIEELDIERAAD ILEEMDPDDAADLLGELPDDKADVLLDLMDPEESAPVRRLMDFSPDTVGALMTPEPLIMDPSTTVAEALAMARNPDLPTS LASLIFVVRPPTATPTGKYLGCVHLQKLLREPPSSLIGGILDPDLPPLYADDSQETAARFFATYNLVCGPVLDENRHLLG AVAVDDLLDHMLPEDWRDAGIRPGKEHTHG >Mature_429_residues SGISRLYVGRLAGMVVRGPDTDAIGRVRDVVVNIRPYGHDSRALGLVVELVNNKRRIFVPMLRIAAIEPKDITLVTGSVS LRTFRVRTGELQVMGDIVGAKVHTDDPELQQFHGRAVEIADVELELSRTRDWIITRVAVLGERPKFGRRPVLHTVPWSHI HGITAGGVGESNHTAELIAGFEDMRPADVAKQLYQLPTAQRTEVTEELDDEKLADILQELSEDRQAELIEELDIERAADI LEEMDPDDAADLLGELPDDKADVLLDLMDPEESAPVRRLMDFSPDTVGALMTPEPLIMDPSTTVAEALAMARNPDLPTSL ASLIFVVRPPTATPTGKYLGCVHLQKLLREPPSSLIGGILDPDLPPLYADDSQETAARFFATYNLVCGPVLDENRHLLGA VAVDDLLDHMLPEDWRDAGIRPGKEHTHG
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 47318; Mature: 47186
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGISRLYVGRLAGMVVRGPDTDAIGRVRDVVVNIRPYGHDSRALGLVVELVNNKRRIFV CCCHHHHHHHHHHCEEEECCCCHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCCEEEE PMLRIAAIEPKDITLVTGSVSLRTFRVRTGELQVMGDIVGAKVHTDDPELQQFHGRAVEI EHHHHHCCCCCCEEEEECCEEEEEEEEECCCEEEEEHHHCCEEECCCHHHHHHCCCEEEE ADVELELSRTRDWIITRVAVLGERPKFGRRPVLHTVPWSHIHGITAGGVGESNHTAELIA EEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHCCCEECCCCCCCCHHHHHH GFEDMRPADVAKQLYQLPTAQRTEVTEELDDEKLADILQELSEDRQAELIEELDIERAAD CHHCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILEEMDPDDAADLLGELPDDKADVLLDLMDPEESAPVRRLMDFSPDTVGALMTPEPLIMD HHHHCCCCHHHHHHHCCCCCHHHEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEC PSTTVAEALAMARNPDLPTSLASLIFVVRPPTATPTGKYLGCVHLQKLLREPPSSLIGGI CCHHHHHHHHHHCCCCCCHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCC LDPDLPPLYADDSQETAARFFATYNLVCGPVLDENRHLLGAVAVDDLLDHMLPEDWRDAG CCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCEEHHHHHHHHHHHHCCCHHHHCC IRPGKEHTHG CCCCCCCCCC >Mature Secondary Structure SGISRLYVGRLAGMVVRGPDTDAIGRVRDVVVNIRPYGHDSRALGLVVELVNNKRRIFV CCHHHHHHHHHHCEEEECCCCHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCCEEEE PMLRIAAIEPKDITLVTGSVSLRTFRVRTGELQVMGDIVGAKVHTDDPELQQFHGRAVEI EHHHHHCCCCCCEEEEECCEEEEEEEEECCCEEEEEHHHCCEEECCCHHHHHHCCCEEEE ADVELELSRTRDWIITRVAVLGERPKFGRRPVLHTVPWSHIHGITAGGVGESNHTAELIA EEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHCCCEECCCCCCCCHHHHHH GFEDMRPADVAKQLYQLPTAQRTEVTEELDDEKLADILQELSEDRQAELIEELDIERAAD CHHCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILEEMDPDDAADLLGELPDDKADVLLDLMDPEESAPVRRLMDFSPDTVGALMTPEPLIMD HHHHCCCCHHHHHHHCCCCCHHHEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEC PSTTVAEALAMARNPDLPTSLASLIFVVRPPTATPTGKYLGCVHLQKLLREPPSSLIGGI CCHHHHHHHHHHCCCCCCHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCC LDPDLPPLYADDSQETAARFFATYNLVCGPVLDENRHLLGAVAVDDLLDHMLPEDWRDAG CCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCEEHHHHHHHHHHHHCCCHHHHCC IRPGKEHTHG CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA