| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is mrp [H]
Identifier: 145295266
GI number: 145295266
Start: 1310083
End: 1311207
Strand: Reverse
Name: mrp [H]
Synonym: cgR_1207
Alternate gene names: 145295266
Gene position: 1311207-1310083 (Counterclockwise)
Preceding gene: 145295267
Following gene: 145295262
Centisome position: 39.56
GC content: 55.11
Gene sequence:
>1125_bases ATGACTCAAGTAACCGAATCCGCTGTCCGCAGCGCGCTATCCCGCGTAGAGGATCCAGAGATCGGTAAGCCCATCACAGA GCTCGGCATGGTCAAATCAGTGTCCATCGACGGCTCTGATGTCCAGGTGGAGGTCTACCTGACGATCGCGGCTTGCCCGA TGAAAACCACCATTGTCACCAACACTGAAGCAGCTCTCAAAGACATCGACGGGGTTGGCCAAGTTCAGGTCACCACCGAT GTCATGAGTGATGAACAGCGCCGTGCGCTCCGCGTCTCCCTGCGCGGTGAAACTTCTGAGCCAGTGATTCCATTCGCTCA GCCTGGTTCCACTACCCGCGTTTACGCTGTTGCTTCCGGCAAAGGTGGCGTAGGAAAATCCTCCATGACGGTGAACTTGG CTGCAGCCCTAGCCAAGCGCGGACTGTCTGTGGGAATTTTGGATGCCGATATTTACGGACACTCAGTGCCCGGAATGCTT GGCTCAGACCAACGCCCACACCAGGTCGATGACATGATCATGCCTCCCCAGGCACACGGCGTGAAGATGATATCCATTGC TCACTTCACCGAAGGAAATGCTCCTGTGGTTTGGCGTGGACCAATGCTGCACCGTGCCATCCAGCAATTCCTCACTGACG TGTTCTGGGGCGACCTGGATATTTTGCTGCTGGATCTTCCTCCAGGAACTGGTGACATCGCCATCACTGTTGCCCAATTG ATCCCGAATGCTGAGTTGCTCATTGTGACCACTCCTCAGGCTGCCGCAGCTGAGGTTGCCGAGCGAGCAGGAACGATCTC TGTGCAGACCAACCAGAAGGTTGCTGGCGTGATTGAAAACATGTCTGCCATGGTGCTTCCTGATGGCACCACCATGGATG TTTTCGGCACCGGCGGCGGTCAAAAGATTGCTGATCGTCTTACCGCTGTGACAGGTGAAGAGGTCAAGGTCATCGGATCT GTTCCATTGGATCCGAACCTGCGTATCGGTGGCGATGTGGGAAATCCTATTGCGATTTCTGAACCACACTCCCCAACCGC TGCAGCGATCAATGAGATCGCTGAACACCTAGCTCACCGCAAGGTATCGCTGGTGGGTAAAACGCTTGGGCTTGGCGTTA AATAA
Upstream 100 bases:
>100_bases AGCACGGATCAGGACCTCAAGATTTGTCTGACCCCACTCAGGGTGATGTTGCAGACGAATTTTAGGGAGTATCAAAACTT GGGACTACTATCGATACGTG
Downstream 100 bases:
>100_bases AAGCTAAATAATATCGGTCCAAGAGACGCCGCCTGAGTAATTCGGGCCGTCTTTTGGATCGTTTTGCGTTGGGCGTGCGG TGGAACCATCAGCTGGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MTQVTESAVRSALSRVEDPEIGKPITELGMVKSVSIDGSDVQVEVYLTIAACPMKTTIVTNTEAALKDIDGVGQVQVTTD VMSDEQRRALRVSLRGETSEPVIPFAQPGSTTRVYAVASGKGGVGKSSMTVNLAAALAKRGLSVGILDADIYGHSVPGML GSDQRPHQVDDMIMPPQAHGVKMISIAHFTEGNAPVVWRGPMLHRAIQQFLTDVFWGDLDILLLDLPPGTGDIAITVAQL IPNAELLIVTTPQAAAAEVAERAGTISVQTNQKVAGVIENMSAMVLPDGTTMDVFGTGGGQKIADRLTAVTGEEVKVIGS VPLDPNLRIGGDVGNPIAISEPHSPTAAAINEIAEHLAHRKVSLVGKTLGLGVK
Sequences:
>Translated_374_residues MTQVTESAVRSALSRVEDPEIGKPITELGMVKSVSIDGSDVQVEVYLTIAACPMKTTIVTNTEAALKDIDGVGQVQVTTD VMSDEQRRALRVSLRGETSEPVIPFAQPGSTTRVYAVASGKGGVGKSSMTVNLAAALAKRGLSVGILDADIYGHSVPGML GSDQRPHQVDDMIMPPQAHGVKMISIAHFTEGNAPVVWRGPMLHRAIQQFLTDVFWGDLDILLLDLPPGTGDIAITVAQL IPNAELLIVTTPQAAAAEVAERAGTISVQTNQKVAGVIENMSAMVLPDGTTMDVFGTGGGQKIADRLTAVTGEEVKVIGS VPLDPNLRIGGDVGNPIAISEPHSPTAAAINEIAEHLAHRKVSLVGKTLGLGVK >Mature_373_residues TQVTESAVRSALSRVEDPEIGKPITELGMVKSVSIDGSDVQVEVYLTIAACPMKTTIVTNTEAALKDIDGVGQVQVTTDV MSDEQRRALRVSLRGETSEPVIPFAQPGSTTRVYAVASGKGGVGKSSMTVNLAAALAKRGLSVGILDADIYGHSVPGMLG SDQRPHQVDDMIMPPQAHGVKMISIAHFTEGNAPVVWRGPMLHRAIQQFLTDVFWGDLDILLLDLPPGTGDIAITVAQLI PNAELLIVTTPQAAAAEVAERAGTISVQTNQKVAGVIENMSAMVLPDGTTMDVFGTGGGQKIADRLTAVTGEEVKVIGSV PLDPNLRIGGDVGNPIAISEPHSPTAAAINEIAEHLAHRKVSLVGKTLGLGVK
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=252, Percent_Identity=39.6825396825397, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI6912540, Length=264, Percent_Identity=39.7727272727273, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI118572611, Length=252, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=4e-28, Organism=Escherichia coli, GI87082045, Length=257, Percent_Identity=43.579766536965, Blast_Score=180, Evalue=1e-46, Organism=Caenorhabditis elegans, GI25143050, Length=257, Percent_Identity=35.0194552529183, Blast_Score=127, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6322188, Length=243, Percent_Identity=34.156378600823, Blast_Score=140, Evalue=4e-34, Organism=Saccharomyces cerevisiae, GI6321347, Length=251, Percent_Identity=34.2629482071713, Blast_Score=125, Evalue=8e-30, Organism=Drosophila melanogaster, GI221511043, Length=248, Percent_Identity=33.8709677419355, Blast_Score=155, Evalue=3e-38, Organism=Drosophila melanogaster, GI24667611, Length=260, Percent_Identity=37.3076923076923, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI19921440, Length=264, Percent_Identity=34.0909090909091, Blast_Score=88, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR015223 - InterPro: IPR002744 - InterPro: IPR000808 [H]
Pfam domain/function: PF01883 DUF59; PF09140 MipZ; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 39105; Mature: 38974
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQVTESAVRSALSRVEDPEIGKPITELGMVKSVSIDGSDVQVEVYLTIAACPMKTTIVT CCCCHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEEECCCCEEEEEEEEEEECCCEEEEEE NTEAALKDIDGVGQVQVTTDVMSDEQRRALRVSLRGETSEPVIPFAQPGSTTRVYAVASG CCHHHHHHCCCCCEEEEEHHHHCCCCCEEEEEEECCCCCCCEEEECCCCCCEEEEEEECC KGGVGKSSMTVNLAAALAKRGLSVGILDADIYGHSVPGMLGSDQRPHQVDDMIMPPQAHG CCCCCCCCEEEHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VKMISIAHFTEGNAPVVWRGPMLHRAIQQFLTDVFWGDLDILLLDLPPGTGDIAITVAQL EEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHEEEEEHH IPNAELLIVTTPQAAAAEVAERAGTISVQTNQKVAGVIENMSAMVLPDGTTMDVFGTGGG CCCCCEEEEECCCHHHHHHHHHCCEEEEECCCHHHHHHHCCCEEEECCCCEEEEEECCCC QKIADRLTAVTGEEVKVIGSVPLDPNLRIGGDVGNPIAISEPHSPTAAAINEIAEHLAHR HHHHHHHHHCCCCCEEEEECCCCCCCCEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHH KVSLVGKTLGLGVK HHHHHHHHHCCCCC >Mature Secondary Structure TQVTESAVRSALSRVEDPEIGKPITELGMVKSVSIDGSDVQVEVYLTIAACPMKTTIVT CCCHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEEECCCCEEEEEEEEEEECCCEEEEEE NTEAALKDIDGVGQVQVTTDVMSDEQRRALRVSLRGETSEPVIPFAQPGSTTRVYAVASG CCHHHHHHCCCCCEEEEEHHHHCCCCCEEEEEEECCCCCCCEEEECCCCCCEEEEEEECC KGGVGKSSMTVNLAAALAKRGLSVGILDADIYGHSVPGMLGSDQRPHQVDDMIMPPQAHG CCCCCCCCEEEHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VKMISIAHFTEGNAPVVWRGPMLHRAIQQFLTDVFWGDLDILLLDLPPGTGDIAITVAQL EEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHEEEEEHH IPNAELLIVTTPQAAAAEVAERAGTISVQTNQKVAGVIENMSAMVLPDGTTMDVFGTGGG CCCCCEEEEECCCHHHHHHHHHCCEEEEECCCHHHHHHHCCCEEEECCCCEEEEEECCCC QKIADRLTAVTGEEVKVIGSVPLDPNLRIGGDVGNPIAISEPHSPTAAAINEIAEHLAHR HHHHHHHHHCCCCCEEEEECCCCCCCCEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHH KVSLVGKTLGLGVK HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]