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The map label for this gene is ywaF [H]

Identifier: 145295226

GI number: 145295226

Start: 1273865

End: 1274590

Strand: Reverse

Name: ywaF [H]

Synonym: cgR_1167

Alternate gene names: 145295226

Gene position: 1274590-1273865 (Counterclockwise)

Preceding gene: 145295227

Following gene: 145295219

Centisome position: 38.46

GC content: 50.96

Gene sequence:

>726_bases
ATGGAAAACCCTGGTGATCTCGGCGCTATGCCACAGTACGGTTTTGAACATATTTCCATGCTCATCACCGCTGTGGTTTT
GTCGATTCTTGTCGTCCCCATTGCTCGTCGATTTAACTTCGCGCCGACCTTTGGCTGGGTGTTGCTCATCTCCACAATTT
TATGGAACCTATGGAATTTCCTTCCCGGCTACTACACGCTAGAGCAATCCTGGCCCTTCCACTTCTCAGATGCATTGCGC
ATTATTGCTGCCATCGCATTGATTAATCGCGCGCGGTGGGCAGTTTCAGTGACTATTTTGTGGGGCACCACGATCAACCT
GATGTCGCTGCTCACCCCGGATGTTCAGTATCTGCAGGTCCCGTGGCTGGAATTTGTGATGTATTGGTTCATGCACATCT
CAGTGTTCCTGGCAGCGATGATCCTCATTTTCAGCTTCGGTGAAAAACCCGGACTGTCTGGTGTGGTGACATCTGTTGCA
GTGGCTATTAGCTGGGGCATCATGTGCCTCATCGTCAACGCATTTTTGGGCACCAACTACGGCTACCTCTTCACAGAACC
AGAATCAGCATCAATTTTGGATCTGTTGGGAGGATGGCCGTTCTACATCGTCGCAGAGGTACTTATCCTGTGCGCGGTGT
GGGCGTTGTGGTCTTATCTGATTGGTAAATTGCCCACTACCTATCGCCCTGCTTACCGGCCAAAAACTCGGAAAGCCGCT
GCGTAG

Upstream 100 bases:

>100_bases
TGATGGTGGCTCGGTTGTATTCGAGGGCAGCCCCGCGGAACTCATCAAAACTGATACTCCAACAGGACGCCACCTTAAAG
CTTATGTAGATTAGTTTCTT

Downstream 100 bases:

>100_bases
CCACCTTCCACCTGTAAAAACGCCGGAATGAACTCCTCCGGCTTCGGGTGATCTGGAAGAGCGGCCAAGTATTCTTTGTG
AGCTTGAAGGGATGCAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MENPGDLGAMPQYGFEHISMLITAVVLSILVVPIARRFNFAPTFGWVLLISTILWNLWNFLPGYYTLEQSWPFHFSDALR
IIAAIALINRARWAVSVTILWGTTINLMSLLTPDVQYLQVPWLEFVMYWFMHISVFLAAMILIFSFGEKPGLSGVVTSVA
VAISWGIMCLIVNAFLGTNYGYLFTEPESASILDLLGGWPFYIVAEVLILCAVWALWSYLIGKLPTTYRPAYRPKTRKAA
A

Sequences:

>Translated_241_residues
MENPGDLGAMPQYGFEHISMLITAVVLSILVVPIARRFNFAPTFGWVLLISTILWNLWNFLPGYYTLEQSWPFHFSDALR
IIAAIALINRARWAVSVTILWGTTINLMSLLTPDVQYLQVPWLEFVMYWFMHISVFLAAMILIFSFGEKPGLSGVVTSVA
VAISWGIMCLIVNAFLGTNYGYLFTEPESASILDLLGGWPFYIVAEVLILCAVWALWSYLIGKLPTTYRPAYRPKTRKAA
A
>Mature_241_residues
MENPGDLGAMPQYGFEHISMLITAVVLSILVVPIARRFNFAPTFGWVLLISTILWNLWNFLPGYYTLEQSWPFHFSDALR
IIAAIALINRARWAVSVTILWGTTINLMSLLTPDVQYLQVPWLEFVMYWFMHISVFLAAMILIFSFGEKPGLSGVVTSVA
VAISWGIMCLIVNAFLGTNYGYLFTEPESASILDLLGGWPFYIVAEVLILCAVWALWSYLIGKLPTTYRPAYRPKTRKAA
A

Specific function: Unknown

COG id: COG5522

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011737 [H]

Pfam domain/function: PF09529 Intg_mem_TP0381 [H]

EC number: NA

Molecular weight: Translated: 27170; Mature: 27170

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENPGDLGAMPQYGFEHISMLITAVVLSILVVPIARRFNFAPTFGWVLLISTILWNLWNF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LPGYYTLEQSWPFHFSDALRIIAAIALINRARWAVSVTILWGTTINLMSLLTPDVQYLQV
CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHCCCHHHHHC
PWLEFVMYWFMHISVFLAAMILIFSFGEKPGLSGVVTSVAVAISWGIMCLIVNAFLGTNY
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GYLFTEPESASILDLLGGWPFYIVAEVLILCAVWALWSYLIGKLPTTYRPAYRPKTRKAA
CEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
A
C
>Mature Secondary Structure
MENPGDLGAMPQYGFEHISMLITAVVLSILVVPIARRFNFAPTFGWVLLISTILWNLWNF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LPGYYTLEQSWPFHFSDALRIIAAIALINRARWAVSVTILWGTTINLMSLLTPDVQYLQV
CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHCCCHHHHHC
PWLEFVMYWFMHISVFLAAMILIFSFGEKPGLSGVVTSVAVAISWGIMCLIVNAFLGTNY
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GYLFTEPESASILDLLGGWPFYIVAEVLILCAVWALWSYLIGKLPTTYRPAYRPKTRKAA
CEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1806041; 7934828; 9384377 [H]