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The map label for this gene is ycdQ [C]

Identifier: 145295181

GI number: 145295181

Start: 1235241

End: 1236710

Strand: Direct

Name: ycdQ [C]

Synonym: cgR_1123

Alternate gene names: 145295181

Gene position: 1235241-1236710 (Clockwise)

Preceding gene: 145295180

Following gene: 145295182

Centisome position: 37.27

GC content: 51.36

Gene sequence:

>1470_bases
ATGGAAAAGAAGAGCTTTCCAATCGCAAGAGTCATCGGTATCGGCGTCCTTGGCATCGCCGGGATGGGAATATTGCTGCT
ATGGCTTGCAGTTACCCTGTCTGATCCAGCATCACCGGGTGCCCAAGAAACCGAAGTCTTTGATAGGTGGAAAGTGCTCT
TTGATGACTATATTCCACCAGTCAGGGTATTGGTTGCTGCAATTATCGTTGCATTAATTTTCGTCTTTATCGCTGCCACA
GTGGAACGAACCGTAACCAACCGCTACCGACGCTCCGTAGACGGCGAAGGAGTGCCATTAGCGCCGAAGATTGTGATGGC
AGAAACCCGAGGGGTATTTCATGGACCAATTACCATTAACGTGCTCGTGCCAGCACACAATGAGGCGGAAAGAATTACTG
GAACAATTCAGGCATTGAAATCACAACATGAGCCCCCAGAACGCATCGTTGTAGTTGCCGATAATTGCACTGATGAAACT
ACGGAATTAGCCCGTGCTGAGGGAGTAGAGGTCTTGGAAACAGTCAATAATAAGTTTAAGAAGGCCGGAGGGCTCAATCA
GGCTTTGAGCCGGATGCTTCCCACATTGGGGGAGAATGACATTGTGATGATCGTTGACGCTGATACAGCACTTGACCAAG
GTTTCCTCAAGGAAGCACGACGCCGCTTTGAGTCTGATCGCGCTCTAATGGCCGTGGGCGGATTGTTCTACGGTGAGTCA
GGTTCCGGATGGCTCGGCCAATATCAGCGCAACGAATACACCCGTTATAGCCGTGACATCTATCGACGCCGCGGACGTGT
GTTTGTTTTGACTGGAACAGCGTCGGCTTTTCGGCCACGCGGCCTGCGGACAGTGGCGGAATCACGCGGGACATTGATCC
CCGGACGTAAAGGCGATGTTTATGACACCGCGGCGTTGACCGAAGATAATGAGTTGACCCTGGCTTTGAAATCACTCGGT
GGGCTTATGGTGTCACCCAATGAGTGCTCGGTAGTGACAGAAGTGATGCCGACGTGGAGAGAATTGTGGCATCAAAGGCT
TCGATGGCAACGCGGTGCGCTGGAAAACCTTGGTGCTTATGGCATCACACCACAAACGACACGGTATTGGTTCCAGCAGC
TGGGAATCGGTTACGGCGCATTAGCCTTGGGCGCCTATTTCGCAGTCATTATCATCACGTTTCTCGCCCGAGATCAGTGG
ATCTGGTATCCATTCTGGATGCTGCTGGGACTGTTGTTCATGATTGAACGCGTGCTAACAGTATGGAGGTCCACATGGTT
TGCCAGGTTTGTTGCTGCGTTATTAATCCCAGAGCTCATCTACGCCAGCTATCTCAACCTGGTATTTCTCAAAGGCGTTG
TGGATATTCTATTGGCCAAGCAAGCTCACTGGGGTGAGCATGATGACAAGCCAATGCAGGTAGCCGATACAGCTGCCGAA
ACTAACGATGAAGGGGAGGAACGCCGATGA

Upstream 100 bases:

>100_bases
TACGCCCAAGGTTTTTATATTGGTAAATCCAAGCCAATTGATGAATTTATAGCTACTTATCTCGAGACGAACCAAACCGC
TACCTGGGGGTAGGAAGAAT

Downstream 100 bases:

>100_bases
TCTTTTCAGAAGAGATTCTCCATACCGACTGGTTCGCAGCACTTACTGCTTTCGTCGCGATTAACACCACAATCTATGTG
GTTCTTGCTATTGCTAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyltransferase; Polysaccharide Deacetylase; Bi-Functional Transferase/Deacetylase; Glycosyl Transferase Domain-Containing Protein; Glycosyl Transferase Group 2 Family Protein; Hyaluronan Synthase-Like Protein; Bifunctional Transferase/Deacetylase; Family 2 Glycosyl Transferase; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MEKKSFPIARVIGIGVLGIAGMGILLLWLAVTLSDPASPGAQETEVFDRWKVLFDDYIPPVRVLVAAIIVALIFVFIAAT
VERTVTNRYRRSVDGEGVPLAPKIVMAETRGVFHGPITINVLVPAHNEAERITGTIQALKSQHEPPERIVVVADNCTDET
TELARAEGVEVLETVNNKFKKAGGLNQALSRMLPTLGENDIVMIVDADTALDQGFLKEARRRFESDRALMAVGGLFYGES
GSGWLGQYQRNEYTRYSRDIYRRRGRVFVLTGTASAFRPRGLRTVAESRGTLIPGRKGDVYDTAALTEDNELTLALKSLG
GLMVSPNECSVVTEVMPTWRELWHQRLRWQRGALENLGAYGITPQTTRYWFQQLGIGYGALALGAYFAVIIITFLARDQW
IWYPFWMLLGLLFMIERVLTVWRSTWFARFVAALLIPELIYASYLNLVFLKGVVDILLAKQAHWGEHDDKPMQVADTAAE
TNDEGEERR

Sequences:

>Translated_489_residues
MEKKSFPIARVIGIGVLGIAGMGILLLWLAVTLSDPASPGAQETEVFDRWKVLFDDYIPPVRVLVAAIIVALIFVFIAAT
VERTVTNRYRRSVDGEGVPLAPKIVMAETRGVFHGPITINVLVPAHNEAERITGTIQALKSQHEPPERIVVVADNCTDET
TELARAEGVEVLETVNNKFKKAGGLNQALSRMLPTLGENDIVMIVDADTALDQGFLKEARRRFESDRALMAVGGLFYGES
GSGWLGQYQRNEYTRYSRDIYRRRGRVFVLTGTASAFRPRGLRTVAESRGTLIPGRKGDVYDTAALTEDNELTLALKSLG
GLMVSPNECSVVTEVMPTWRELWHQRLRWQRGALENLGAYGITPQTTRYWFQQLGIGYGALALGAYFAVIIITFLARDQW
IWYPFWMLLGLLFMIERVLTVWRSTWFARFVAALLIPELIYASYLNLVFLKGVVDILLAKQAHWGEHDDKPMQVADTAAE
TNDEGEERR
>Mature_489_residues
MEKKSFPIARVIGIGVLGIAGMGILLLWLAVTLSDPASPGAQETEVFDRWKVLFDDYIPPVRVLVAAIIVALIFVFIAAT
VERTVTNRYRRSVDGEGVPLAPKIVMAETRGVFHGPITINVLVPAHNEAERITGTIQALKSQHEPPERIVVVADNCTDET
TELARAEGVEVLETVNNKFKKAGGLNQALSRMLPTLGENDIVMIVDADTALDQGFLKEARRRFESDRALMAVGGLFYGES
GSGWLGQYQRNEYTRYSRDIYRRRGRVFVLTGTASAFRPRGLRTVAESRGTLIPGRKGDVYDTAALTEDNELTLALKSLG
GLMVSPNECSVVTEVMPTWRELWHQRLRWQRGALENLGAYGITPQTTRYWFQQLGIGYGALALGAYFAVIIITFLARDQW
IWYPFWMLLGLLFMIERVLTVWRSTWFARFVAALLIPELIYASYLNLVFLKGVVDILLAKQAHWGEHDDKPMQVADTAAE
TNDEGEERR

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54724; Mature: 54724

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKSFPIARVIGIGVLGIAGMGILLLWLAVTLSDPASPGAQETEVFDRWKVLFDDYIPP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCH
VRVLVAAIIVALIFVFIAATVERTVTNRYRRSVDGEGVPLAPKIVMAETRGVFHGPITIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEECCEEEE
VLVPAHNEAERITGTIQALKSQHEPPERIVVVADNCTDETTELARAEGVEVLETVNNKFK
EEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHH
KAGGLNQALSRMLPTLGENDIVMIVDADTALDQGFLKEARRRFESDRALMAVGGLFYGES
HCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCEEECCC
GSGWLGQYQRNEYTRYSRDIYRRRGRVFVLTGTASAFRPRGLRTVAESRGTLIPGRKGDV
CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCHHHHHHCCCCCCCCCCCCC
YDTAALTEDNELTLALKSLGGLMVSPNECSVVTEVMPTWRELWHQRLRWQRGALENLGAY
CCHHHCCCCCCCEEEHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GITPQTTRYWFQQLGIGYGALALGAYFAVIIITFLARDQWIWYPFWMLLGLLFMIERVLT
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VWRSTWFARFVAALLIPELIYASYLNLVFLKGVVDILLAKQAHWGEHDDKPMQVADTAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHC
TNDEGEERR
CCCCCCCCC
>Mature Secondary Structure
MEKKSFPIARVIGIGVLGIAGMGILLLWLAVTLSDPASPGAQETEVFDRWKVLFDDYIPP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCH
VRVLVAAIIVALIFVFIAATVERTVTNRYRRSVDGEGVPLAPKIVMAETRGVFHGPITIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEECCEEEE
VLVPAHNEAERITGTIQALKSQHEPPERIVVVADNCTDETTELARAEGVEVLETVNNKFK
EEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHH
KAGGLNQALSRMLPTLGENDIVMIVDADTALDQGFLKEARRRFESDRALMAVGGLFYGES
HCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCEEECCC
GSGWLGQYQRNEYTRYSRDIYRRRGRVFVLTGTASAFRPRGLRTVAESRGTLIPGRKGDV
CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCHHHHHHCCCCCCCCCCCCC
YDTAALTEDNELTLALKSLGGLMVSPNECSVVTEVMPTWRELWHQRLRWQRGALENLGAY
CCHHHCCCCCCCEEEHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GITPQTTRYWFQQLGIGYGALALGAYFAVIIITFLARDQWIWYPFWMLLGLLFMIERVLT
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VWRSTWFARFVAALLIPELIYASYLNLVFLKGVVDILLAKQAHWGEHDDKPMQVADTAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHC
TNDEGEERR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA