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The map label for this gene is ybgL [C]

Identifier: 145295152

GI number: 145295152

Start: 1206346

End: 1207104

Strand: Reverse

Name: ybgL [C]

Synonym: cgR_1095

Alternate gene names: 145295152

Gene position: 1207104-1206346 (Counterclockwise)

Preceding gene: 145295153

Following gene: 145295151

Centisome position: 36.42

GC content: 60.21

Gene sequence:

>759_bases
ATGACCACCATCGATCTCAACAGCGACCTCGGCGAAAGCTACGGCAGCTGGGTCATGGGCAACGACGTAGCTGTTCTTGA
CTTGGTGTCCAGCGCCAATATTGCCTGCGGTTTCCATGCCGGCGACGCCACTGTGTTGTTCAAAACTGTGCGCGCAGCCC
ATGCACGCCACGTCCGCATCGGCGCACACATTGGTTACAACGACATCGCAGGTTTTGGTCGCCGCAACCTCGACGTCGCT
CACGATGACCTCGTCGCCGAAACGATCTACCAGATCGGCGCCATTCAAGCTGCGGCTAAAGCCAGCGGTGCGGTTGTGGA
ATATGTAAAACCACACGGCGCGCTGTACAACACCATTGCGGTTGACGAAGCCCAGGCCGCAGCAGTCATCGAGGGCATCA
AGCTGGTCAATCCTGAGCTCTCCCTCATGGCCCTGGCTGGCTCCCAAATCGTCGAGCAGGCTCGCGCCGCGGGGCTTCAA
GTTGAGCAGGAAACTTTCGCCGACCGCGCCTACACCGCCGATGGCCAGCTGGTTTCCCGCAAGCTTCCCGGCGCGGTACT
GCACGACCCCGAAACCGCAGCCAGGCAGGCCTTGGCGTTTGCCACCGGCCAGCCCATCACCGCGATCACCGGGGAGAGCG
TGCTTGTCGACGCCAACTCCATCTGTGTTCATGGGGATAATCCGCAAGCTCTCGCATTGGTGGAGAAAATCGTGACCACC
CTTGCAGCTCATGAGGTTCAGGTTTCCCATGCTCGTTAG

Upstream 100 bases:

>100_bases
GGAGTCATCGGCCTGGTTATCGCATGGTTCTTGGCTTATGTCTCCTTCGGTGGAGTCTTCGATCTTCTTAGCAGTTAACG
TTTTTTGAAAGGATTTTTTC

Downstream 100 bases:

>100_bases
ACCATGTGGTGAGCAAGCAGTCATCATCGATTTGCTTGCTGAAGATTCCGAAGCCGTCCAAGGCAGCATCTTGGATGCTG
TTCTTGCACTCAACCGCTCT

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MTTIDLNSDLGESYGSWVMGNDVAVLDLVSSANIACGFHAGDATVLFKTVRAAHARHVRIGAHIGYNDIAGFGRRNLDVA
HDDLVAETIYQIGAIQAAAKASGAVVEYVKPHGALYNTIAVDEAQAAAVIEGIKLVNPELSLMALAGSQIVEQARAAGLQ
VEQETFADRAYTADGQLVSRKLPGAVLHDPETAARQALAFATGQPITAITGESVLVDANSICVHGDNPQALALVEKIVTT
LAAHEVQVSHAR

Sequences:

>Translated_252_residues
MTTIDLNSDLGESYGSWVMGNDVAVLDLVSSANIACGFHAGDATVLFKTVRAAHARHVRIGAHIGYNDIAGFGRRNLDVA
HDDLVAETIYQIGAIQAAAKASGAVVEYVKPHGALYNTIAVDEAQAAAVIEGIKLVNPELSLMALAGSQIVEQARAAGLQ
VEQETFADRAYTADGQLVSRKLPGAVLHDPETAARQALAFATGQPITAITGESVLVDANSICVHGDNPQALALVEKIVTT
LAAHEVQVSHAR
>Mature_251_residues
TTIDLNSDLGESYGSWVMGNDVAVLDLVSSANIACGFHAGDATVLFKTVRAAHARHVRIGAHIGYNDIAGFGRRNLDVAH
DDLVAETIYQIGAIQAAAKASGAVVEYVKPHGALYNTIAVDEAQAAAVIEGIKLVNPELSLMALAGSQIVEQARAAGLQV
EQETFADRAYTADGQLVSRKLPGAVLHDPETAARQALAFATGQPITAITGESVLVDANSICVHGDNPQALALVEKIVTTL
AAHEVQVSHAR

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=239, Percent_Identity=42.6778242677824, Blast_Score=188, Evalue=4e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 26338; Mature: 26207

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIDLNSDLGESYGSWVMGNDVAVLDLVSSANIACGFHAGDATVLFKTVRAAHARHVRI
CEEEECCCCHHHHHCCEECCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCEEEE
GAHIGYNDIAGFGRRNLDVAHDDLVAETIYQIGAIQAAAKASGAVVEYVKPHGALYNTIA
EEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEE
VDEAQAAAVIEGIKLVNPELSLMALAGSQIVEQARAAGLQVEQETFADRAYTADGQLVSR
ECCHHHHHHHHHHHEECCCEEEEEHHHHHHHHHHHHCCCEEHHHHHHHHEECCCCHHHHH
KLPGAVLHDPETAARQALAFATGQPITAITGESVLVDANSICVHGDNPQALALVEKIVTT
CCCCCEEECCHHHHHHHHHHHCCCCEEEECCCEEEEECCEEEEECCCCHHHHHHHHHHHH
LAAHEVQVSHAR
HHHHHEEEECCC
>Mature Secondary Structure 
TTIDLNSDLGESYGSWVMGNDVAVLDLVSSANIACGFHAGDATVLFKTVRAAHARHVRI
EEEECCCCHHHHHCCEECCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCEEEE
GAHIGYNDIAGFGRRNLDVAHDDLVAETIYQIGAIQAAAKASGAVVEYVKPHGALYNTIA
EEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEE
VDEAQAAAVIEGIKLVNPELSLMALAGSQIVEQARAAGLQVEQETFADRAYTADGQLVSR
ECCHHHHHHHHHHHEECCCEEEEEHHHHHHHHHHHHCCCEEHHHHHHHHEECCCCHHHHH
KLPGAVLHDPETAARQALAFATGQPITAITGESVLVDANSICVHGDNPQALALVEKIVTT
CCCCCEEECCHHHHHHHHHHHCCCCEEEECCCEEEEECCEEEEECCCCHHHHHHHHHHHH
LAAHEVQVSHAR
HHHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]