| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is pat [H]
Identifier: 145295149
GI number: 145295149
Start: 1204289
End: 1204819
Strand: Direct
Name: pat [H]
Synonym: cgR_1092
Alternate gene names: 145295149
Gene position: 1204289-1204819 (Clockwise)
Preceding gene: 145295148
Following gene: 145295154
Centisome position: 36.34
GC content: 53.86
Gene sequence:
>531_bases ATGGTTGAAAGAGACTTCACTATCCGACCAATCCGCGAGGGTGATTTCCCTCAGGTGAGGGACATCTACGAATTGGGCCT GGAGACGGGACATGCGTCTTATGAGACTTCTGGTCCCACGTGGGACCAGTTCTCCCAATCTAAAATCATGGATACCGTCA TGGTGGCGGTAGAAAACAACGACCCGGACTTCATCCTCGGATGGGTGTCTGCTGCTCCAATTTCAAGCCGACAGGTTTTT CATGGAGTGGTGGAAGATTCCATCTATATCCACCCCCAGGGCCAAGGCCGAGGAATCGGCGGCGCTTTGCTCGACGCCCT TATCACCTACTGCGAAAGCAACGGCATCTGGTCGATCCACTCCTGGATCTTCCCGGAAAACCTCGGTTCTGCGAAACTAC ATGAATCGAAGGGCTTCGTGAAGGTGGGCACCATGCACCAAATGGCAAGGATGCCCTACGGCGAGATGGAAGGACAATGG CGCGATTGTGATCTGTGGGAGCGCCTCTTATCCGTTCCAGAGCAAGCTTAA
Upstream 100 bases:
>100_bases GAAGCGTCCGCAGGCAAGAAAACGTCCCGGAAAACGGCGATAGGGGTCACCCGCGCATGTCCGGTTGCCGATCTATTTAA ATACCAGGACAATTGCGTGC
Downstream 100 bases:
>100_bases AGTTCCTAAAGCAATTTAAATCTGACTTTATCGCCCGGCAACAGCTGGGCCGAACGATCACACGACCTTGATGTAAGTAC TGCTATTACTGGATAGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: PPT N-acetyltransferase; Phosphinothricin-resistance protein [H]
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MVERDFTIRPIREGDFPQVRDIYELGLETGHASYETSGPTWDQFSQSKIMDTVMVAVENNDPDFILGWVSAAPISSRQVF HGVVEDSIYIHPQGQGRGIGGALLDALITYCESNGIWSIHSWIFPENLGSAKLHESKGFVKVGTMHQMARMPYGEMEGQW RDCDLWERLLSVPEQA
Sequences:
>Translated_176_residues MVERDFTIRPIREGDFPQVRDIYELGLETGHASYETSGPTWDQFSQSKIMDTVMVAVENNDPDFILGWVSAAPISSRQVF HGVVEDSIYIHPQGQGRGIGGALLDALITYCESNGIWSIHSWIFPENLGSAKLHESKGFVKVGTMHQMARMPYGEMEGQW RDCDLWERLLSVPEQA >Mature_176_residues MVERDFTIRPIREGDFPQVRDIYELGLETGHASYETSGPTWDQFSQSKIMDTVMVAVENNDPDFILGWVSAAPISSRQVF HGVVEDSIYIHPQGQGRGIGGALLDALITYCESNGIWSIHSWIFPENLGSAKLHESKGFVKVGTMHQMARMPYGEMEGQW RDCDLWERLLSVPEQA
Specific function: This enzyme is an effector of phosphinothricin tripeptide (PTT or bialaphos) resistance. Inactivates PTT by transfer of an acetyl group [H]
COG id: COG1247
COG function: function code M; Sortase and related acyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.183 [H]
Molecular weight: Translated: 19847; Mature: 19847
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVERDFTIRPIREGDFPQVRDIYELGLETGHASYETSGPTWDQFSQSKIMDTVMVAVENN CCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHEEEEEEEECC DPDFILGWVSAAPISSRQVFHGVVEDSIYIHPQGQGRGIGGALLDALITYCESNGIWSIH CCCEEEEEECCCCCCCHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEE SWIFPENLGSAKLHESKGFVKVGTMHQMARMPYGEMEGQWRDCDLWERLLSVPEQA EEECCCCCCCCEEECCCCEEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure MVERDFTIRPIREGDFPQVRDIYELGLETGHASYETSGPTWDQFSQSKIMDTVMVAVENN CCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHEEEEEEEECC DPDFILGWVSAAPISSRQVFHGVVEDSIYIHPQGQGRGIGGALLDALITYCESNGIWSIH CCCEEEEEECCCCCCCHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEE SWIFPENLGSAKLHESKGFVKVGTMHQMARMPYGEMEGQWRDCDLWERLLSVPEQA EEECCCCCCCCEEECCCCEEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA