| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145295099
Identifier: 145295099
GI number: 145295099
Start: 1150049
End: 1150675
Strand: Reverse
Name: 145295099
Synonym: cgR_1042
Alternate gene names: NA
Gene position: 1150675-1150049 (Counterclockwise)
Preceding gene: 145295100
Following gene: 145295097
Centisome position: 34.72
GC content: 56.62
Gene sequence:
>627_bases ATGCCCACCACGGACGTCTTCAACCGCGTCCGGTTGGCATTGGAACCTCTAGCTGATCCCGCACGTGCCACCGGAATGGC AAGCTACATGCGGGATCAGTTTTCTTTTCTCGGTATCCCATCCACCCCCAGAAAAGAAGCCTGCAAACCCGTACTGTCCG CGCTAAAAGAGTTGGACACTGACTTTGTCTCAGACTGCTTTGGCGCAGCTGAACGGGAATACCAATATGTTGCCTGCGAT CACATCAATCGCGTCGGCATCACCGATCTAGGTTTTGCCAAAGCACTAGTGCAGACCAAATCCTGGTGGGACACCGTCGA TTCTCTAGCAAAACCGATCGGCGCCAACCACGATGATGATCTGATGAAAACGTGGGCGCTTGATGAGGACTTCTGGGTGC GCCGCATCGCGATCATCCACCAACTGGGCCGCAGGAAAAACACCGACGCTGCCCTGCTGGCCTGGATCATCGAGCAGAAC CTCGGCTCCAGCGAGTTCTTCATCAACAAAGCGATCGGCTGGGCACTGCGGGATTTCGCCCGCCACGACCCCAGCTGGGT CCGGGCTTTTGTCGACGCCACGGACCTCTCCCCACTGAGCCGGCGAGAAGCACTGAAGAATATTTAG
Upstream 100 bases:
>100_bases GACCGTTTTGTCGATCGCACCGCTGCTGGCTCGCACCATCAACGAGATCTTCGAAAACGGTTCCGTCACCACCCTCTTCG AGGGCGAGGCCTAAACACCC
Downstream 100 bases:
>100_bases CCCTCAGGCATCATCTGAGCGAGTGCCTCTGGATCAAAGTACATCAGCTCCCAGCCGTGTCCATCCGGATCATCAAAAGC TCCGCCGTACATGGGTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: DNA-7-Methylguanine Glycosylase; DNA Alkylation Repair Protein; DNA Alkylation Repair Truncation; DNA Alkylation Repair
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MPTTDVFNRVRLALEPLADPARATGMASYMRDQFSFLGIPSTPRKEACKPVLSALKELDTDFVSDCFGAAEREYQYVACD HINRVGITDLGFAKALVQTKSWWDTVDSLAKPIGANHDDDLMKTWALDEDFWVRRIAIIHQLGRRKNTDAALLAWIIEQN LGSSEFFINKAIGWALRDFARHDPSWVRAFVDATDLSPLSRREALKNI
Sequences:
>Translated_208_residues MPTTDVFNRVRLALEPLADPARATGMASYMRDQFSFLGIPSTPRKEACKPVLSALKELDTDFVSDCFGAAEREYQYVACD HINRVGITDLGFAKALVQTKSWWDTVDSLAKPIGANHDDDLMKTWALDEDFWVRRIAIIHQLGRRKNTDAALLAWIIEQN LGSSEFFINKAIGWALRDFARHDPSWVRAFVDATDLSPLSRREALKNI >Mature_207_residues PTTDVFNRVRLALEPLADPARATGMASYMRDQFSFLGIPSTPRKEACKPVLSALKELDTDFVSDCFGAAEREYQYVACDH INRVGITDLGFAKALVQTKSWWDTVDSLAKPIGANHDDDLMKTWALDEDFWVRRIAIIHQLGRRKNTDAALLAWIIEQNL GSSEFFINKAIGWALRDFARHDPSWVRAFVDATDLSPLSRREALKNI
Specific function: Unknown
COG id: COG4912
COG function: function code L; Predicted DNA alkylation repair enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23530; Mature: 23399
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTDVFNRVRLALEPLADPARATGMASYMRDQFSFLGIPSTPRKEACKPVLSALKELDT CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH DFVSDCFGAAEREYQYVACDHINRVGITDLGFAKALVQTKSWWDTVDSLAKPIGANHDDD HHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LMKTWALDEDFWVRRIAIIHQLGRRKNTDAALLAWIIEQNLGSSEFFINKAIGWALRDFA HHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RHDPSWVRAFVDATDLSPLSRREALKNI HCCHHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure PTTDVFNRVRLALEPLADPARATGMASYMRDQFSFLGIPSTPRKEACKPVLSALKELDT CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH DFVSDCFGAAEREYQYVACDHINRVGITDLGFAKALVQTKSWWDTVDSLAKPIGANHDDD HHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LMKTWALDEDFWVRRIAIIHQLGRRKNTDAALLAWIIEQNLGSSEFFINKAIGWALRDFA HHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RHDPSWVRAFVDATDLSPLSRREALKNI HCCHHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA