| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is livM [H]
Identifier: 145295090
GI number: 145295090
Start: 1142107
End: 1143195
Strand: Direct
Name: livM [H]
Synonym: cgR_1033
Alternate gene names: 145295090
Gene position: 1142107-1143195 (Clockwise)
Preceding gene: 145295089
Following gene: 145295091
Centisome position: 34.46
GC content: 56.2
Gene sequence:
>1089_bases ATGAGCACTCAACTCAAGCTGAAGAAGCCCGCAAAGAAGAAAACTACGCCGAAACTTAGCGTCGTAAATGCTCCCACGCT GCGCACTGCGGCGTTGGTCCTGGCCGCGCTCGCTGCGGTATTGCTGTGCGCCCCGCTCTTCTTATCCACATTCCAGCTGA CGTTGATGTCGCGCTTGGTGTGTTATGCGATCGTCGCAGTCGGCATCGGGCTGGCGTGGGGCAGAGGCGGCATGCTCACG CTGGGGCAAGGCGTGTTCTTTGGAATCGGCGCGTACATCATGGCCATGCACATGCTGTACAGCGATTCGCAGATTTTTGG GACCACAGTTCCGCAATGGTGGTCCATTTTTGCCAACCCGGCAGTCGCACTCATCGCAGTTGTGGCGCTTCCCGGCATCG TGGCTTTTGTGCTCGGCTTCTCCATTTTCAAACGACGCATCAAAGGCGCCTACTTTGCCATCGTGAACCAAGCGCTCGCC GCAGCTGTCGTGGTGTTGCTGGTCGGACAACAAGATTCCCTTGGAGGTTCCAATGGTCTTTCCGGATTTCGATCATTCAT GGGTTTTGCCGTCTACGACCCCATTAACCGCATCATGTTTTACTTCACCGCAGTGGGAGTTCTCTTGGCTTTGGTGGCTA TCTCATATTGGCTCATGCGCAGCCGCTATGGAGAACTGCTCGTGGCCACCAGAGACGCAGAAGAACGCGTCCGATTCCTC GGATATGATCCCGCATTGATCAAAACCGCCGCATATGTCATTGCTGCGATGATTGCCGGAATCGCCGGAGCGCTGTTCGT GCCGATCGTGGGCATCATTTCACCCGCAGAAATCGGCGTGGTGCCATCAATCGTGTTCGTGATCGCCGTCGCCGCTGGTG GCAGGGCATCCCTATTCGGTCCCGTAGTTGGCGCGCTGGTGCTGGGCTGGGTGGAATCCACACTTGCTCAAACTTTCCCC AGCATGTGGTCCTATTTCCAGGGTGCGATCCTGGTTCTCGTGATCGTGTTGCTGCCGGGCGGAATTGCTTCAATTAAACT TTCCGCGCTCAAAAATAAGGCCAGGAAGGCCAGAAAGGCCACCTCATGA
Upstream 100 bases:
>100_bases CAGGTGCGAGCATCGCGAAGTTCATCGTGCTCATCGCTGTTGTTGCCTTCCTGCAGTTTAGGCCTCAAGGACTCTTCCAA ACCCAAACTAGGAGCCTCGT
Downstream 100 bases:
>100_bases GTCTTAAAATCACCAACCTCAAAGTCGCTTTCGGGTCGTTCATCGCCGTGAATGAGATTAGTTTTCAGGTGCTGCCCGGT GACGTCCACTTCCTCATCGG
Product: hypothetical protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein M [H]
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MSTQLKLKKPAKKKTTPKLSVVNAPTLRTAALVLAALAAVLLCAPLFLSTFQLTLMSRLVCYAIVAVGIGLAWGRGGMLT LGQGVFFGIGAYIMAMHMLYSDSQIFGTTVPQWWSIFANPAVALIAVVALPGIVAFVLGFSIFKRRIKGAYFAIVNQALA AAVVVLLVGQQDSLGGSNGLSGFRSFMGFAVYDPINRIMFYFTAVGVLLALVAISYWLMRSRYGELLVATRDAEERVRFL GYDPALIKTAAYVIAAMIAGIAGALFVPIVGIISPAEIGVVPSIVFVIAVAAGGRASLFGPVVGALVLGWVESTLAQTFP SMWSYFQGAILVLVIVLLPGGIASIKLSALKNKARKARKATS
Sequences:
>Translated_362_residues MSTQLKLKKPAKKKTTPKLSVVNAPTLRTAALVLAALAAVLLCAPLFLSTFQLTLMSRLVCYAIVAVGIGLAWGRGGMLT LGQGVFFGIGAYIMAMHMLYSDSQIFGTTVPQWWSIFANPAVALIAVVALPGIVAFVLGFSIFKRRIKGAYFAIVNQALA AAVVVLLVGQQDSLGGSNGLSGFRSFMGFAVYDPINRIMFYFTAVGVLLALVAISYWLMRSRYGELLVATRDAEERVRFL GYDPALIKTAAYVIAAMIAGIAGALFVPIVGIISPAEIGVVPSIVFVIAVAAGGRASLFGPVVGALVLGWVESTLAQTFP SMWSYFQGAILVLVIVLLPGGIASIKLSALKNKARKARKATS >Mature_361_residues STQLKLKKPAKKKTTPKLSVVNAPTLRTAALVLAALAAVLLCAPLFLSTFQLTLMSRLVCYAIVAVGIGLAWGRGGMLTL GQGVFFGIGAYIMAMHMLYSDSQIFGTTVPQWWSIFANPAVALIAVVALPGIVAFVLGFSIFKRRIKGAYFAIVNQALAA AVVVLLVGQQDSLGGSNGLSGFRSFMGFAVYDPINRIMFYFTAVGVLLALVAISYWLMRSRYGELLVATRDAEERVRFLG YDPALIKTAAYVIAAMIAGIAGALFVPIVGIISPAEIGVVPSIVFVIAVAAGGRASLFGPVVGALVLGWVESTLAQTFPS MWSYFQGAILVLVIVLLPGGIASIKLSALKNKARKARKATS
Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=381, Percent_Identity=28.3464566929134, Blast_Score=95, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 38270; Mature: 38139
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQLKLKKPAKKKTTPKLSVVNAPTLRTAALVLAALAAVLLCAPLFLSTFQLTLMSRLV CCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CYAIVAVGIGLAWGRGGMLTLGQGVFFGIGAYIMAMHMLYSDSQIFGTTVPQWWSIFANP HHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHCCH AVALIAVVALPGIVAFVLGFSIFKRRIKGAYFAIVNQALAAAVVVLLVGQQDSLGGSNGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH SGFRSFMGFAVYDPINRIMFYFTAVGVLLALVAISYWLMRSRYGELLVATRDAEERVRFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHC GYDPALIKTAAYVIAAMIAGIAGALFVPIVGIISPAEIGVVPSIVFVIAVAAGGRASLFG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHH PVVGALVLGWVESTLAQTFPSMWSYFQGAILVLVIVLLPGGIASIKLSALKNKARKARKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC TS CC >Mature Secondary Structure STQLKLKKPAKKKTTPKLSVVNAPTLRTAALVLAALAAVLLCAPLFLSTFQLTLMSRLV CCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CYAIVAVGIGLAWGRGGMLTLGQGVFFGIGAYIMAMHMLYSDSQIFGTTVPQWWSIFANP HHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHCCH AVALIAVVALPGIVAFVLGFSIFKRRIKGAYFAIVNQALAAAVVVLLVGQQDSLGGSNGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH SGFRSFMGFAVYDPINRIMFYFTAVGVLLALVAISYWLMRSRYGELLVATRDAEERVRFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHC GYDPALIKTAAYVIAAMIAGIAGALFVPIVGIISPAEIGVVPSIVFVIAVAAGGRASLFG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHH PVVGALVLGWVESTLAQTFPSMWSYFQGAILVLVIVLLPGGIASIKLSALKNKARKARKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC TS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2195019; 8041620; 9278503 [H]