Definition Corynebacterium glutamicum R chromosome, complete genome.
Accession NC_009342
Length 3,314,179

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The map label for this gene is pdxK [H]

Identifier: 145295071

GI number: 145295071

Start: 1121887

End: 1122681

Strand: Direct

Name: pdxK [H]

Synonym: cgR_1014

Alternate gene names: 145295071

Gene position: 1121887-1122681 (Clockwise)

Preceding gene: 145295070

Following gene: 145295073

Centisome position: 33.85

GC content: 60.5

Gene sequence:

>795_bases
ATGCCATCGGCAGGCGAGGAGATTTTAGAGCAGCGCGCGCAGCTGGAGTTTGATCAGCGTCGCGCCGATGTGGTGATGAT
CGGCAGCCAGGTGGTTTATGGTTCCGTGGGGCTGAGCGCTGCCATTCCGGTGATGCATAATGAAGGCCTCCGCGTGGTCG
CTGTCCCCACCGTGGTGTTAAGTTCCATGCCGCGTTATGCCAGTTCTCACCGCCAGCCGATGTCGGACCAATGGCTCGCC
GACGCGCTGCAAGACCTGGTGGATCTGGGGATTATCGATGAGGTTTCCACCATTTCCACCGGCTATTTTACCTCTGCATC
TCAGGTGCGCGTGGTCGCTGCGTGGCTGCAGAAAATCCGCGGAACCCACCCGCATGTACGCATCGTGGTGGATCCCATAA
TGGGGGACAGTGACGTGGGAATTTATGTCGCCGACGAGATCGCAACCGCCATCTGCCAGGACTTATGCCCGTTGGCCACC
GGAATCATTCCAAATGCTTTCGAGCTCTCCCACATGGTTGGCTCCGGCGATCCGCGCTCGCTGCTCGGCCCGTTTGGCGA
GTGGATCATCGTCACCAGCGCCACTGAAACTGCGGGCACCACCGTCACCCGCATCGTCACGCGCGATAGCGTCCAGGAAA
TCGCCTCCGCCACCGTCGATACCACGGCCAAAGGGGCAGGCGACGTCTACGCCGCAGCAGTAATCGCCGCATTGCATAAA
GATTTTTCGCTTATCGACGCCGCCACCCACGCATCCAACACCGTCCGCGCCGGCCTGCAGACCAAAGCGCTCTAG

Upstream 100 bases:

>100_bases
GCTCACCGAGCTGGACACCAAGCTCCGCGCAGTGCAGGAAGAACACGGCGAGCTGGAAATGCAGTGGCTGGAACTCGGCG
AGGAAATCGAGGGCTAGTTC

Downstream 100 bases:

>100_bases
GTTTCGTCCGTTTCTGACAGCAAACTACCGAGCAGCAATCCCAGCACGAAATCATCAACCTGCCCGAACTGCACCTGACG
GATCCGTCCTTTTCGATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: PN/PL/PM kinase; Pyridoxal kinase; Pyridoxamine kinase; Vitamin B6 kinase [H]

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MPSAGEEILEQRAQLEFDQRRADVVMIGSQVVYGSVGLSAAIPVMHNEGLRVVAVPTVVLSSMPRYASSHRQPMSDQWLA
DALQDLVDLGIIDEVSTISTGYFTSASQVRVVAAWLQKIRGTHPHVRIVVDPIMGDSDVGIYVADEIATAICQDLCPLAT
GIIPNAFELSHMVGSGDPRSLLGPFGEWIIVTSATETAGTTVTRIVTRDSVQEIASATVDTTAKGAGDVYAAAVIAALHK
DFSLIDAATHASNTVRAGLQTKAL

Sequences:

>Translated_264_residues
MPSAGEEILEQRAQLEFDQRRADVVMIGSQVVYGSVGLSAAIPVMHNEGLRVVAVPTVVLSSMPRYASSHRQPMSDQWLA
DALQDLVDLGIIDEVSTISTGYFTSASQVRVVAAWLQKIRGTHPHVRIVVDPIMGDSDVGIYVADEIATAICQDLCPLAT
GIIPNAFELSHMVGSGDPRSLLGPFGEWIIVTSATETAGTTVTRIVTRDSVQEIASATVDTTAKGAGDVYAAAVIAALHK
DFSLIDAATHASNTVRAGLQTKAL
>Mature_263_residues
PSAGEEILEQRAQLEFDQRRADVVMIGSQVVYGSVGLSAAIPVMHNEGLRVVAVPTVVLSSMPRYASSHRQPMSDQWLAD
ALQDLVDLGIIDEVSTISTGYFTSASQVRVVAAWLQKIRGTHPHVRIVVDPIMGDSDVGIYVADEIATAICQDLCPLATG
IIPNAFELSHMVGSGDPRSLLGPFGEWIIVTSATETAGTTVTRIVTRDSVQEIASATVDTTAKGAGDVYAAAVIAALHKD
FSLIDAATHASNTVRAGLQTKAL

Specific function: Phosphorylates B6 vitamers; functions in a salvage pathway. Uses pyridoxal, pyridoxine, and pyridoxamine as substrates [H]

COG id: COG2240

COG function: function code H; Pyridoxal/pyridoxine/pyridoxamine kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyridoxine kinase family [H]

Homologues:

Organism=Escherichia coli, GI1788758, Length=251, Percent_Identity=39.8406374501992, Blast_Score=174, Evalue=5e-45,
Organism=Escherichia coli, GI1787924, Length=249, Percent_Identity=25.7028112449799, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013749
- InterPro:   IPR004625 [H]

Pfam domain/function: PF08543 Phos_pyr_kin [H]

EC number: =2.7.1.35 [H]

Molecular weight: Translated: 27951; Mature: 27820

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSAGEEILEQRAQLEFDQRRADVVMIGSQVVYGSVGLSAAIPVMHNEGLRVVAVPTVVL
CCCCHHHHHHHHHHCCHHHCCCCEEEECCEEEEECCCHHHCCCEEECCCCEEEEHHHHHH
SSMPRYASSHRQPMSDQWLADALQDLVDLGIIDEVSTISTGYFTSASQVRVVAAWLQKIR
HCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
GTHPHVRIVVDPIMGDSDVGIYVADEIATAICQDLCPLATGIIPNAFELSHMVGSGDPRS
CCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHH
LLGPFGEWIIVTSATETAGTTVTRIVTRDSVQEIASATVDTTAKGAGDVYAAAVIAALHK
HHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
DFSLIDAATHASNTVRAGLQTKAL
CHHHHHHHHHCCHHHHHCCHHCCC
>Mature Secondary Structure 
PSAGEEILEQRAQLEFDQRRADVVMIGSQVVYGSVGLSAAIPVMHNEGLRVVAVPTVVL
CCCHHHHHHHHHHCCHHHCCCCEEEECCEEEEECCCHHHCCCEEECCCCEEEEHHHHHH
SSMPRYASSHRQPMSDQWLADALQDLVDLGIIDEVSTISTGYFTSASQVRVVAAWLQKIR
HCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
GTHPHVRIVVDPIMGDSDVGIYVADEIATAICQDLCPLATGIIPNAFELSHMVGSGDPRS
CCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHH
LLGPFGEWIIVTSATETAGTTVTRIVTRDSVQEIASATVDTTAKGAGDVYAAAVIAALHK
HHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
DFSLIDAATHASNTVRAGLQTKAL
CHHHHHHHHHCCHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA