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The map label for this gene is yycB [H]

Identifier: 145295056

GI number: 145295056

Start: 1102976

End: 1104178

Strand: Direct

Name: yycB [H]

Synonym: cgR_0999

Alternate gene names: 145295056

Gene position: 1102976-1104178 (Clockwise)

Preceding gene: 145295055

Following gene: 145295057

Centisome position: 33.28

GC content: 52.04

Gene sequence:

>1203_bases
ATGTCCGGAACCTCCCCAAAACTAAAAGTCTTTACCTTTCTAGCTGTCCTCGTGGCAGCTTTTAATTTGCGCTCAGCCAT
CGTGTCGGTCGGCGCAGTGCTTGATGATCTCGTCCATGATTTTGGGGCGTCCGGATCAACCGCAGGAATTATCACAGCCA
TACCAGGAATCGCCTTCGGCATTTTTGGTGTGGCTGCTGTGCCTTTAGCGAAGAAAATCGGACTCAGTGGTGCACTTACA
TCCGGAATGATCGTTGGACTCATCGGGTTGTCAATCCGCCCATGGGTCGGCAACATTTGGGCATTTATCTTCCTCACCGG
CTTCGTGGTGATGGGAATTGCGGTCGCCAACATTTTGCTTCCGGCGTGGATCAAACTCCACGGTGGCAAAAGCACTGTCG
CATTGATGACGGTGTACACCACCGTGCTTGGTGTTGGATCTACTTTGGGGCCGTTGTCCACATTGCTGTTTAGCGGATCG
AATGCGTGGCGCTGGGCAATCTTTATTTGGGCACTTCCTGCCGTTTTGCAGGTGGCAATCTGGCTGCCCATGTGGTGGGA
CAAGAAATATGACTTCCCAGCCGAGACTGTGAAATCTGGTTCGACTGGAAAGATCTGGACATCGCCAACAGCATTCTTCA
TCATGCTGTTCTTCGGTTTGCAGTCCATGAACGCATATATCCAAATGGGATGGCTGCCCAAAATCTTTATCGATGCCGGT
GTAAGTCCCGCACATGCCTCTATCGGATTGTCGATTGTGGGCATCATGGGCATTGTTGGTGGATTCACAATGCCTGTCGC
AATCGCTAGGACCAGGGATAAGAACCTCGTGTGGTTCCCAGTGGTCTTTGGTGCATCGATGTTCCTCGGTTATGTGGGAA
CGTGGCTGTGGCCGTCCCAAGGCTGGTACCTGTGGTCATTCCTTCTTGGTTTAGGTGGACTCTGCTTCCCGATGGCTATC
GCCCTGATTCCAGCGCGTACGAAAGATCCGAGAATTACCGCAAGCTTGTCTGGATTTGTGCAGCCGGTGGGTTACATTCT
TGCAGCCCTTGGGCCATTGGCAGTGGGAGCGATCTACCAAGCGATTGGCTCCTGGTCAGAGATCCTCGTTGGTTTGGCCT
TGGGCACAATAGTGTTGTCGATTGTGGGATTCAGAGCAGCACGCAATGTGACGGTTGATGATGAATTGAGGAGATCAAAG
TAG

Upstream 100 bases:

>100_bases
GTTGCAATGCCGGAGGAACCTTACTACGAGGAGCCACGTCGAAACATTCGACACCTGGGTCAGCGTCGCGTGAGCTAGCC
ACAGGGTAAGGTTTCGGACT

Downstream 100 bases:

>100_bases
CCTCAACTAAGCGTCACGATAAGAACGAGGGGCAAGGCTGATGTACTCTGTCAACCATGGATAAACCGGTCGTGAGGGAT
GCAGCTCTGCTGATTTTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MSGTSPKLKVFTFLAVLVAAFNLRSAIVSVGAVLDDLVHDFGASGSTAGIITAIPGIAFGIFGVAAVPLAKKIGLSGALT
SGMIVGLIGLSIRPWVGNIWAFIFLTGFVVMGIAVANILLPAWIKLHGGKSTVALMTVYTTVLGVGSTLGPLSTLLFSGS
NAWRWAIFIWALPAVLQVAIWLPMWWDKKYDFPAETVKSGSTGKIWTSPTAFFIMLFFGLQSMNAYIQMGWLPKIFIDAG
VSPAHASIGLSIVGIMGIVGGFTMPVAIARTRDKNLVWFPVVFGASMFLGYVGTWLWPSQGWYLWSFLLGLGGLCFPMAI
ALIPARTKDPRITASLSGFVQPVGYILAALGPLAVGAIYQAIGSWSEILVGLALGTIVLSIVGFRAARNVTVDDELRRSK

Sequences:

>Translated_400_residues
MSGTSPKLKVFTFLAVLVAAFNLRSAIVSVGAVLDDLVHDFGASGSTAGIITAIPGIAFGIFGVAAVPLAKKIGLSGALT
SGMIVGLIGLSIRPWVGNIWAFIFLTGFVVMGIAVANILLPAWIKLHGGKSTVALMTVYTTVLGVGSTLGPLSTLLFSGS
NAWRWAIFIWALPAVLQVAIWLPMWWDKKYDFPAETVKSGSTGKIWTSPTAFFIMLFFGLQSMNAYIQMGWLPKIFIDAG
VSPAHASIGLSIVGIMGIVGGFTMPVAIARTRDKNLVWFPVVFGASMFLGYVGTWLWPSQGWYLWSFLLGLGGLCFPMAI
ALIPARTKDPRITASLSGFVQPVGYILAALGPLAVGAIYQAIGSWSEILVGLALGTIVLSIVGFRAARNVTVDDELRRSK
>Mature_399_residues
SGTSPKLKVFTFLAVLVAAFNLRSAIVSVGAVLDDLVHDFGASGSTAGIITAIPGIAFGIFGVAAVPLAKKIGLSGALTS
GMIVGLIGLSIRPWVGNIWAFIFLTGFVVMGIAVANILLPAWIKLHGGKSTVALMTVYTTVLGVGSTLGPLSTLLFSGSN
AWRWAIFIWALPAVLQVAIWLPMWWDKKYDFPAETVKSGSTGKIWTSPTAFFIMLFFGLQSMNAYIQMGWLPKIFIDAGV
SPAHASIGLSIVGIMGIVGGFTMPVAIARTRDKNLVWFPVVFGASMFLGYVGTWLWPSQGWYLWSFLLGLGGLCFPMAIA
LIPARTKDPRITASLSGFVQPVGYILAALGPLAVGAIYQAIGSWSEILVGLALGTIVLSIVGFRAARNVTVDDELRRSK

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]

Homologues:

Organism=Escherichia coli, GI1788092, Length=402, Percent_Identity=28.8557213930348, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1786536, Length=378, Percent_Identity=25.1322751322751, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42462; Mature: 42331

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGTSPKLKVFTFLAVLVAAFNLRSAIVSVGAVLDDLVHDFGASGSTAGIITAIPGIAFG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
IFGVAAVPLAKKIGLSGALTSGMIVGLIGLSIRPWVGNIWAFIFLTGFVVMGIAVANILL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
PAWIKLHGGKSTVALMTVYTTVLGVGSTLGPLSTLLFSGSNAWRWAIFIWALPAVLQVAI
HHHHEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
WLPMWWDKKYDFPAETVKSGSTGKIWTSPTAFFIMLFFGLQSMNAYIQMGWLPKIFIDAG
HCCHHCCCCCCCCHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCC
VSPAHASIGLSIVGIMGIVGGFTMPVAIARTRDKNLVWFPVVFGASMFLGYVGTWLWPSQ
CCCCHHHHHHHHHHHHHHHCCHHHHHHEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCC
GWYLWSFLLGLGGLCFPMAIALIPARTKDPRITASLSGFVQPVGYILAALGPLAVGAIYQ
CHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIGSWSEILVGLALGTIVLSIVGFRAARNVTVDDELRRSK
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
>Mature Secondary Structure 
SGTSPKLKVFTFLAVLVAAFNLRSAIVSVGAVLDDLVHDFGASGSTAGIITAIPGIAFG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
IFGVAAVPLAKKIGLSGALTSGMIVGLIGLSIRPWVGNIWAFIFLTGFVVMGIAVANILL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
PAWIKLHGGKSTVALMTVYTTVLGVGSTLGPLSTLLFSGSNAWRWAIFIWALPAVLQVAI
HHHHEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
WLPMWWDKKYDFPAETVKSGSTGKIWTSPTAFFIMLFFGLQSMNAYIQMGWLPKIFIDAG
HCCHHCCCCCCCCHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCC
VSPAHASIGLSIVGIMGIVGGFTMPVAIARTRDKNLVWFPVVFGASMFLGYVGTWLWPSQ
CCCCHHHHHHHHHHHHHHHCCHHHHHHEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCC
GWYLWSFLLGLGGLCFPMAIALIPARTKDPRITASLSGFVQPVGYILAALGPLAVGAIYQ
CHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIGSWSEILVGLALGTIVLSIVGFRAARNVTVDDELRRSK
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]