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The map label for this gene is rpmE2 [H]

Identifier: 145295042

GI number: 145295042

Start: 1092024

End: 1092290

Strand: Direct

Name: rpmE2 [H]

Synonym: cgR_0986

Alternate gene names: 145295042

Gene position: 1092024-1092290 (Clockwise)

Preceding gene: 145295033

Following gene: 145295043

Centisome position: 32.95

GC content: 58.05

Gene sequence:

>267_bases
ATGAAAAAGGATATCCACCCTGACTACCATGCGGTAGTCTTCCAGGACGCAGGTACTGGCTTCCAGTTCCTGACCAAGTC
CACCGCTTCCAGCGACCGCACCGTGTCCTGGGAAGATGGTAACGAGTACCCACTGATCGTCGTTGACGTCACCAGCGAGT
CTCACCCATTCTGGACCGGCGCTCAGCGTGTCATGGACACCGCTGGTCGTGTTGAGAAGTTCGAGCGCCGCTTCGGTGGC
ATGGCTCGCCGCAAGAAGAAGGCATAG

Upstream 100 bases:

>100_bases
CCAAATCATGGTGATGCATACTTACCGAACCCAACTCGGGCACGATCTGGCATCCGCTGGAACCGACCTGAAGTTTCAAT
CCTGAGGGAATCGAGAGTAA

Downstream 100 bases:

>100_bases
GAGGGAAAACAATGGCAGTTCCAAAGCGCCGTATGTCCCGCGCAAACACCCGCATGCGCCGTTCCCAGTGGAAGGCCGAC
AATGTCGCCCTTCAGGAGGT

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MKKDIHPDYHAVVFQDAGTGFQFLTKSTASSDRTVSWEDGNEYPLIVVDVTSESHPFWTGAQRVMDTAGRVEKFERRFGG
MARRKKKA

Sequences:

>Translated_88_residues
MKKDIHPDYHAVVFQDAGTGFQFLTKSTASSDRTVSWEDGNEYPLIVVDVTSESHPFWTGAQRVMDTAGRVEKFERRFGG
MARRKKKA
>Mature_88_residues
MKKDIHPDYHAVVFQDAGTGFQFLTKSTASSDRTVSWEDGNEYPLIVVDVTSESHPFWTGAQRVMDTAGRVEKFERRFGG
MARRKKKA

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily [H]

Homologues:

Organism=Escherichia coli, GI2367109, Length=88, Percent_Identity=43.1818181818182, Blast_Score=77, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002150 [H]

Pfam domain/function: PF01197 Ribosomal_L31 [H]

EC number: NA

Molecular weight: Translated: 10009; Mature: 10009

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDIHPDYHAVVFQDAGTGFQFLTKSTASSDRTVSWEDGNEYPLIVVDVTSESHPFWTG
CCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCH
AQRVMDTAGRVEKFERRFGGMARRKKKA
HHHHHHHHHHHHHHHHHHCCHHHHCCCC
>Mature Secondary Structure
MKKDIHPDYHAVVFQDAGTGFQFLTKSTASSDRTVSWEDGNEYPLIVVDVTSESHPFWTG
CCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCH
AQRVMDTAGRVEKFERRFGGMARRKKKA
HHHHHHHHHHHHHHHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12840036 [H]