| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is manA [H]
Identifier: 145294910
GI number: 145294910
Start: 945828
End: 947012
Strand: Direct
Name: manA [H]
Synonym: cgR_0857
Alternate gene names: 145294910
Gene position: 945828-947012 (Clockwise)
Preceding gene: 145294909
Following gene: 145294911
Centisome position: 28.54
GC content: 56.88
Gene sequence:
>1185_bases ATGGAGCTATTGGAAGGCTCACTGCGCACTTACCCATGGGGTTCAAGAACACTGATCGCTGATCTCAAAGGCGAAGAATC ACCATCGTCTCGCCCAGAGGCCGAAGTCTGGTTCGGTGCCCACCCAGGATCACCATCAACCATCGGTGGAAACGCACTCA ACGAAGTCATCGCAGCGAACCCCGAAGAAGCATTGGGCACGCGTGTTGCCGAAGCGTTTGAAAATGAGCTTCCATTCCTC CTCAAAATCCTCGCAGCGGGAGCACCCCTATCACTGCAGGCCCACCCATCGCTGGAACAGGCCCGTGAAGGATTCGCCCG CGAAAACTCAGCAGGAATTGACCTCGCCGCACCGAACCGCAACTACCGCGACCCAAACCACAAGCCAGAGCTGATCGTTG CTCTCACGGATTTTATCGCGATGGCAGGCTTCCGCCCACTGCGGAACACCCTCACCATTTTCGACGCCCTCGCCTGCGAA CCCCTCGACCGCTACCGCAGCATGCTCACCGTCGACAACGAGGAAGAATCCCTCCGCGCACTGTTTACCACCTGGATCAC CATCCCCATCGGTAAACGACACGAACTCATCGATGCCCTCATCAGCAACGCCCACACCTACCTTGAGGCAAGCGATCGTG ACGAGGACATCGCATTCGTGCTCTCACACATCATCGAGCTCAACGAACAATACCCCGGCGATGTCGGCGTTCTGGGTGCT CTGCTGTTGAACTTCTACAAACTTGCCCCAGGCGAAGCCCTCTACCTCGACGCCGCAAACCTTCACGCATACATCAGCGG CCTCGGCGTAGAGATCATGGCGAACTCCGACAACGTGCTCCGCGGCGGACTGACATCCAAATACGTCGACGTCCCAGAGC TCGTGCGCGTGTTGGATTTCAACTCTTTGGAAAACGCTCGCGTGGACGTTGAAGAAGACGGTGCAACGACCCACTACCCA GTTCCAATCAACGAATTCCAACTCGATCGCGTTGCAGTTCAGGGCGAAGCAGAAGCCAACCACGATGGTCCCATGATTGT TCTGTGCACCTCCGGAACTGTTTCCTTGGAAGCAGGGGAGAAGACCCTCGAAGTAGCAGCAGGTCACGCCGCATGGGTTC CAGCAAACGACCCAACCATTGCGATGCGTTCTGAGGACGCAGAAGTATTCCTCGCTAGGGTTTAG
Upstream 100 bases:
>100_bases CTGCGACGGACCTAGCAAAGGGGCGCTGACACAAGCACTGCGTTTGCTGGTGCGCGGACAGTCAGCCACGATCTATTCCA TTGAAGAAAAGGACTTGTAA
Downstream 100 bases:
>100_bases ATCTTTTTAGATTAAAATCATGCGCCCCGCCAGAACTTGGCGGGGCGTAAATCTATTTTGTGCTCGGATTGGCTGACGGG GCGTGTCTGCTGCCGTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MELLEGSLRTYPWGSRTLIADLKGEESPSSRPEAEVWFGAHPGSPSTIGGNALNEVIAANPEEALGTRVAEAFENELPFL LKILAAGAPLSLQAHPSLEQAREGFARENSAGIDLAAPNRNYRDPNHKPELIVALTDFIAMAGFRPLRNTLTIFDALACE PLDRYRSMLTVDNEEESLRALFTTWITIPIGKRHELIDALISNAHTYLEASDRDEDIAFVLSHIIELNEQYPGDVGVLGA LLLNFYKLAPGEALYLDAANLHAYISGLGVEIMANSDNVLRGGLTSKYVDVPELVRVLDFNSLENARVDVEEDGATTHYP VPINEFQLDRVAVQGEAEANHDGPMIVLCTSGTVSLEAGEKTLEVAAGHAAWVPANDPTIAMRSEDAEVFLARV
Sequences:
>Translated_394_residues MELLEGSLRTYPWGSRTLIADLKGEESPSSRPEAEVWFGAHPGSPSTIGGNALNEVIAANPEEALGTRVAEAFENELPFL LKILAAGAPLSLQAHPSLEQAREGFARENSAGIDLAAPNRNYRDPNHKPELIVALTDFIAMAGFRPLRNTLTIFDALACE PLDRYRSMLTVDNEEESLRALFTTWITIPIGKRHELIDALISNAHTYLEASDRDEDIAFVLSHIIELNEQYPGDVGVLGA LLLNFYKLAPGEALYLDAANLHAYISGLGVEIMANSDNVLRGGLTSKYVDVPELVRVLDFNSLENARVDVEEDGATTHYP VPINEFQLDRVAVQGEAEANHDGPMIVLCTSGTVSLEAGEKTLEVAAGHAAWVPANDPTIAMRSEDAEVFLARV >Mature_394_residues MELLEGSLRTYPWGSRTLIADLKGEESPSSRPEAEVWFGAHPGSPSTIGGNALNEVIAANPEEALGTRVAEAFENELPFL LKILAAGAPLSLQAHPSLEQAREGFARENSAGIDLAAPNRNYRDPNHKPELIVALTDFIAMAGFRPLRNTLTIFDALACE PLDRYRSMLTVDNEEESLRALFTTWITIPIGKRHELIDALISNAHTYLEASDRDEDIAFVLSHIIELNEQYPGDVGVLGA LLLNFYKLAPGEALYLDAANLHAYISGLGVEIMANSDNVLRGGLTSKYVDVPELVRVLDFNSLENARVDVEEDGATTHYP VPINEFQLDRVAVQGEAEANHDGPMIVLCTSGTVSLEAGEKTLEVAAGHAAWVPANDPTIAMRSEDAEVFLARV
Specific function: Involved in the conversion of glucose to GDP-L-fucose, which can be converted to L-fucose, a capsular polysaccharide [H]
COG id: COG1482
COG function: function code G; Phosphomannose isomerase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 1 family [H]
Homologues:
Organism=Homo sapiens, GI4505235, Length=423, Percent_Identity=30.4964539007092, Blast_Score=179, Evalue=4e-45, Organism=Escherichia coli, GI1787899, Length=403, Percent_Identity=36.7245657568238, Blast_Score=246, Evalue=2e-66, Organism=Caenorhabditis elegans, GI71997620, Length=398, Percent_Identity=29.6482412060301, Blast_Score=151, Evalue=4e-37, Organism=Caenorhabditis elegans, GI17557650, Length=404, Percent_Identity=28.960396039604, Blast_Score=144, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6320839, Length=429, Percent_Identity=30.3030303030303, Blast_Score=161, Evalue=1e-40, Organism=Drosophila melanogaster, GI21356061, Length=392, Percent_Identity=29.0816326530612, Blast_Score=147, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR001250 - InterPro: IPR016305 - InterPro: IPR018050 - InterPro: IPR014710 [H]
Pfam domain/function: PF01238 PMI_typeI [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 42835; Mature: 42835
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: PS00965 PMI_I_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLEGSLRTYPWGSRTLIADLKGEESPSSRPEAEVWFGAHPGSPSTIGGNALNEVIAAN CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCC PEEALGTRVAEAFENELPFLLKILAAGAPLSLQAHPSLEQAREGFARENSAGIDLAAPNR CHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCCEEEECCCC NYRDPNHKPELIVALTDFIAMAGFRPLRNTLTIFDALACEPLDRYRSMLTVDNEEESLRA CCCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHEECCCCHHHHHH LFTTWITIPIGKRHELIDALISNAHTYLEASDRDEDIAFVLSHIIELNEQYPGDVGVLGA HHHHHEEECCCCHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH LLLNFYKLAPGEALYLDAANLHAYISGLGVEIMANSDNVLRGGLTSKYVDVPELVRVLDF HHHHHHHCCCCCEEEEEHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHCC NSLENARVDVEEDGATTHYPVPINEFQLDRVAVQGEAEANHDGPMIVLCTSGTVSLEAGE CCCCCCEEEEECCCCCEECCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCEEEEECCC KTLEVAAGHAAWVPANDPTIAMRSEDAEVFLARV CEEEEECCCEEEECCCCCEEEEECCCCEEEEEEC >Mature Secondary Structure MELLEGSLRTYPWGSRTLIADLKGEESPSSRPEAEVWFGAHPGSPSTIGGNALNEVIAAN CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCC PEEALGTRVAEAFENELPFLLKILAAGAPLSLQAHPSLEQAREGFARENSAGIDLAAPNR CHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCCEEEECCCC NYRDPNHKPELIVALTDFIAMAGFRPLRNTLTIFDALACEPLDRYRSMLTVDNEEESLRA CCCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHEECCCCHHHHHH LFTTWITIPIGKRHELIDALISNAHTYLEASDRDEDIAFVLSHIIELNEQYPGDVGVLGA HHHHHEEECCCCHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH LLLNFYKLAPGEALYLDAANLHAYISGLGVEIMANSDNVLRGGLTSKYVDVPELVRVLDF HHHHHHHCCCCCEEEEEHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHCC NSLENARVDVEEDGATTHYPVPINEFQLDRVAVQGEAEANHDGPMIVLCTSGTVSLEAGE CCCCCCEEEEECCCCCEECCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCEEEEECCC KTLEVAAGHAAWVPANDPTIAMRSEDAEVFLARV CEEEEECCCEEEECCCCCEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6397402; 9097039; 9278503 [H]