| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is purK [H]
Identifier: 145294884
GI number: 145294884
Start: 920414
End: 921577
Strand: Direct
Name: purK [H]
Synonym: cgR_0831
Alternate gene names: 145294884
Gene position: 920414-921577 (Clockwise)
Preceding gene: 145294883
Following gene: 145294885
Centisome position: 27.77
GC content: 57.39
Gene sequence:
>1164_bases ATGCCCATCGTCGCAGTAATTGGTGACGGCCAATTAGCCCGCATGATGCAGACCTCCGCCATCGAACTCGGACAATCACT GCGAGTTCTAGCTGGAGCGCCGGATTCCTCCGCAGCCCAAGTAGCTGCTGATGTTGTTCTCGGCGATTACACCAACATTG ATGATCTGCGCGTCGCCATCGAAGGCGCCGATGTGATGACCTTCGACCACGAGCACGTCCCCAACGAACACCTGCACCAA CTCATCGCAGAAGGCGTCAACGTTCAGCCACGCCCAGAAGCGCTGGTCAACGCACAAGACAAACTTGTCATGCGCAAGCG TCTACGTGAACTCGGCGCACCAGTCCCACCATTTGCTGCCATTGAATCAGTCGAAGATGCAGTGGGATTCTTCGAAGCAG TCGATGGCCAGGTTTGCCTCAAAGCACGCCGTGGCGGATACGACGGCAAGGGCGTATGGTTCCCGGCCGATGTAGCAGAA CTTCAATCGCTTGTGGCTGAGCTTCTCGACGGTGGCACCCCACTCATGGCTGAAAAGAAAGTTGCCCTCAACAGGGAATT GTCCGCCATGGTTGCCCGCACCCCAAGTGGAGAAACCAAAGCGTGGCCAGTCGTAGAATCCGTGCAGAAGAACGGTGTGT GTGCAGAAGCAATCGCTCCCGCACCTGAACTATCCGCAGAGCTGCAGGAATCCACCAGGGGATTGGCCCAGAAGATCGCC ACTGAACTCGGCGTCACTGGTGTCTTGGCAGTGGAGCTTTTTGAAACCCTCGACCAGAACGGCCAGCCAGAGATCTTTGT TAACGAGCTCGCCATGCGTCCACACAACACCGGCCACTGGACTCAAGATGGCTGCGTGACCAGCCAATTCGAACAGCACC TCCGCGCAGTCCTTGACTACCCACTGGGTGCCACCGACACTTTGGCCGATTACACCGTGATGGCCAACGTGCTCGGTGCC GACACCGACCCAGAGATGCCCATGGCAACCCGCATGGTGGAAGTATGGCGCAAATACCCAGATGCCAAGATCCACCTTTA CGGCAAGGGACATCGACCGGGACGAAAGATCGGCCACGTCAACATGGTCGGATCCGACCTTGAAAAGACCCGAACCGAAG CCCTGGCCTGTGCATACTTCCTGGTCAACGCTCGCTGGGATTAG
Upstream 100 bases:
>100_bases CTCGAAAAGTGGAAGCGCTGCTCAAAGATCTTACATTTTGGTGAAGGCGTTATAGTTAGGACTTGTGACTTCTACAGGAA ACCAAGCCCACGCTCCAGGA
Downstream 100 bases:
>100_bases GTCTTTCTGAGCGCTAGCATTTCTCCACTCAAAGGAGCATGCTTAACCGCATGAAAAGTGCGCGGCCAAAATCAGTCGCT CCAAAATCCGGACAAGCTTT
Product: phosphoribosylaminoimidazole carboxylase ATPase subunit
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MPIVAVIGDGQLARMMQTSAIELGQSLRVLAGAPDSSAAQVAADVVLGDYTNIDDLRVAIEGADVMTFDHEHVPNEHLHQ LIAEGVNVQPRPEALVNAQDKLVMRKRLRELGAPVPPFAAIESVEDAVGFFEAVDGQVCLKARRGGYDGKGVWFPADVAE LQSLVAELLDGGTPLMAEKKVALNRELSAMVARTPSGETKAWPVVESVQKNGVCAEAIAPAPELSAELQESTRGLAQKIA TELGVTGVLAVELFETLDQNGQPEIFVNELAMRPHNTGHWTQDGCVTSQFEQHLRAVLDYPLGATDTLADYTVMANVLGA DTDPEMPMATRMVEVWRKYPDAKIHLYGKGHRPGRKIGHVNMVGSDLEKTRTEALACAYFLVNARWD
Sequences:
>Translated_387_residues MPIVAVIGDGQLARMMQTSAIELGQSLRVLAGAPDSSAAQVAADVVLGDYTNIDDLRVAIEGADVMTFDHEHVPNEHLHQ LIAEGVNVQPRPEALVNAQDKLVMRKRLRELGAPVPPFAAIESVEDAVGFFEAVDGQVCLKARRGGYDGKGVWFPADVAE LQSLVAELLDGGTPLMAEKKVALNRELSAMVARTPSGETKAWPVVESVQKNGVCAEAIAPAPELSAELQESTRGLAQKIA TELGVTGVLAVELFETLDQNGQPEIFVNELAMRPHNTGHWTQDGCVTSQFEQHLRAVLDYPLGATDTLADYTVMANVLGA DTDPEMPMATRMVEVWRKYPDAKIHLYGKGHRPGRKIGHVNMVGSDLEKTRTEALACAYFLVNARWD >Mature_386_residues PIVAVIGDGQLARMMQTSAIELGQSLRVLAGAPDSSAAQVAADVVLGDYTNIDDLRVAIEGADVMTFDHEHVPNEHLHQL IAEGVNVQPRPEALVNAQDKLVMRKRLRELGAPVPPFAAIESVEDAVGFFEAVDGQVCLKARRGGYDGKGVWFPADVAEL QSLVAELLDGGTPLMAEKKVALNRELSAMVARTPSGETKAWPVVESVQKNGVCAEAIAPAPELSAELQESTRGLAQKIAT ELGVTGVLAVELFETLDQNGQPEIFVNELAMRPHNTGHWTQDGCVTSQFEQHLRAVLDYPLGATDTLADYTVMANVLGAD TDPEMPMATRMVEVWRKYPDAKIHLYGKGHRPGRKIGHVNMVGSDLEKTRTEALACAYFLVNARWD
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=370, Percent_Identity=28.3783783783784, Blast_Score=138, Evalue=5e-34, Organism=Saccharomyces cerevisiae, GI6324702, Length=384, Percent_Identity=32.03125, Blast_Score=182, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 41891; Mature: 41760
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIVAVIGDGQLARMMQTSAIELGQSLRVLAGAPDSSAAQVAADVVLGDYTNIDDLRVAI CCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEE EGADVMTFDHEHVPNEHLHQLIAEGVNVQPRPEALVNAQDKLVMRKRLRELGAPVPPFAA ECCEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCCHHH IESVEDAVGFFEAVDGQVCLKARRGGYDGKGVWFPADVAELQSLVAELLDGGTPLMAEKK HHHHHHHHHHHHHCCCHHEEHHHCCCCCCCCEECCCCHHHHHHHHHHHHCCCCCCHHHHH VALNRELSAMVARTPSGETKAWPVVESVQKNGVCAEAIAPAPELSAELQESTRGLAQKIA HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH TELGVTGVLAVELFETLDQNGQPEIFVNELAMRPHNTGHWTQDGCVTSQFEQHLRAVLDY HHHCCHHHHHHHHHHHHCCCCCCCEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHC PLGATDTLADYTVMANVLGADTDPEMPMATRMVEVWRKYPDAKIHLYGKGHRPGRKIGHV CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEE NMVGSDLEKTRTEALACAYFLVNARWD EECCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PIVAVIGDGQLARMMQTSAIELGQSLRVLAGAPDSSAAQVAADVVLGDYTNIDDLRVAI CEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEE EGADVMTFDHEHVPNEHLHQLIAEGVNVQPRPEALVNAQDKLVMRKRLRELGAPVPPFAA ECCEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCCHHH IESVEDAVGFFEAVDGQVCLKARRGGYDGKGVWFPADVAELQSLVAELLDGGTPLMAEKK HHHHHHHHHHHHHCCCHHEEHHHCCCCCCCCEECCCCHHHHHHHHHHHHCCCCCCHHHHH VALNRELSAMVARTPSGETKAWPVVESVQKNGVCAEAIAPAPELSAELQESTRGLAQKIA HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH TELGVTGVLAVELFETLDQNGQPEIFVNELAMRPHNTGHWTQDGCVTSQFEQHLRAVLDY HHHCCHHHHHHHHHHHHCCCCCCCEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHC PLGATDTLADYTVMANVLGADTDPEMPMATRMVEVWRKYPDAKIHLYGKGHRPGRKIGHV CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEE NMVGSDLEKTRTEALACAYFLVNARWD EECCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8998996 [H]