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The map label for this gene is yafL [C]

Identifier: 145294855

GI number: 145294855

Start: 886628

End: 887488

Strand: Reverse

Name: yafL [C]

Synonym: cgR_0802

Alternate gene names: 145294855

Gene position: 887488-886628 (Counterclockwise)

Preceding gene: 145294856

Following gene: 145294854

Centisome position: 26.78

GC content: 60.28

Gene sequence:

>861_bases
ATGATCGGCCTGATCAGCGCCCTTAGCCGCCTAGCCACACACGAACCAGCACAACTTCCGCAACTGGCCATCCCGCAGGC
GCCTGACATTTCAGCCGCCATCGCGCTCGGGCGCGAGCTCAGCGCCAACCCCACCACCCTTTTATCGCTTTTCGACGCCA
CGTCACAACAACACCACCTCCTTGTCACCTCCCTCATCCAGGCCGCTCCCCTCATTGACGCAGCCCGCCACGACATCGCC
ACCACCGCGCAGCACTACCTCAACCAGGCAGCGGGATTAGTCATGCGCAGTTTCTCCATGAATCCGGCGGAATCTTTCGC
AGCGCGCACCGAATTAATTTCACTTCCTGGACTGATGATTGCCGAAGCCAGTCAACGGCTAGAAGAGATGTCCCGACAGG
TGCAACCAATCGTCGAAAAGCTAGTGCAGATTCAGGACCTCACACCTGAGCCAGCCGCCGAACCCGTCGCGGAAACTGCG
CCGGTCTATATGGCGGCGCAGGCGCCAAGCAATGACAACGAGGTGGGCAAACAAGCAGTAGCCGCGGCGAAAGAAGCCCT
CGGCACACCCTATTTATGGGGCGGGACCAGCACTGCCGGCTTCGACTGCAGCGGTTTAACACAGTGGGCTTGGCGTCGCG
CCGGGGTGGAAATTCCGCGCATCGCGGACCAGCAAGCAGTCGGCCGGCAAGTCACCTACGACGAACTTCAAGAAGGCGAT
CTACTGATTTGGGACGGCCACGTAGCCATGTACGCCGGCGGTGGGCAAATCATCGAAGCCGGCGACCCCGTACAGCTCAA
TCCCATCCGAACCTCCAACATCGGGATGGCTTTTCACGGCTACTTCCGACCCACAGGCTAA

Upstream 100 bases:

>100_bases
TGTCCCACACCGCCGAGAATTTAGGAAACCGCGCTCTGACCGGCCTCGCTGAAATCGAAGACACCGACGACCAACTCGCA
CACGCATTGGAGCGCCTGAC

Downstream 100 bases:

>100_bases
GAAAATCCTTAAAGGCCCTACCTCATACGTGACGAAGAAAACCACTACCGGCTAGGATTTATCAGCATGGCTGAAAAAGG
AATCGTTCCCGTTAAACTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MIGLISALSRLATHEPAQLPQLAIPQAPDISAAIALGRELSANPTTLLSLFDATSQQHHLLVTSLIQAAPLIDAARHDIA
TTAQHYLNQAAGLVMRSFSMNPAESFAARTELISLPGLMIAEASQRLEEMSRQVQPIVEKLVQIQDLTPEPAAEPVAETA
PVYMAAQAPSNDNEVGKQAVAAAKEALGTPYLWGGTSTAGFDCSGLTQWAWRRAGVEIPRIADQQAVGRQVTYDELQEGD
LLIWDGHVAMYAGGGQIIEAGDPVQLNPIRTSNIGMAFHGYFRPTG

Sequences:

>Translated_286_residues
MIGLISALSRLATHEPAQLPQLAIPQAPDISAAIALGRELSANPTTLLSLFDATSQQHHLLVTSLIQAAPLIDAARHDIA
TTAQHYLNQAAGLVMRSFSMNPAESFAARTELISLPGLMIAEASQRLEEMSRQVQPIVEKLVQIQDLTPEPAAEPVAETA
PVYMAAQAPSNDNEVGKQAVAAAKEALGTPYLWGGTSTAGFDCSGLTQWAWRRAGVEIPRIADQQAVGRQVTYDELQEGD
LLIWDGHVAMYAGGGQIIEAGDPVQLNPIRTSNIGMAFHGYFRPTG
>Mature_286_residues
MIGLISALSRLATHEPAQLPQLAIPQAPDISAAIALGRELSANPTTLLSLFDATSQQHHLLVTSLIQAAPLIDAARHDIA
TTAQHYLNQAAGLVMRSFSMNPAESFAARTELISLPGLMIAEASQRLEEMSRQVQPIVEKLVQIQDLTPEPAAEPVAETA
PVYMAAQAPSNDNEVGKQAVAAAKEALGTPYLWGGTSTAGFDCSGLTQWAWRRAGVEIPRIADQQAVGRQVTYDELQEGD
LLIWDGHVAMYAGGGQIIEAGDPVQLNPIRTSNIGMAFHGYFRPTG

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 30536; Mature: 30536

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGLISALSRLATHEPAQLPQLAIPQAPDISAAIALGRELSANPTTLLSLFDATSQQHHL
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHH
LVTSLIQAAPLIDAARHDIATTAQHYLNQAAGLVMRSFSMNPAESFAARTELISLPGLMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHH
AEASQRLEEMSRQVQPIVEKLVQIQDLTPEPAAEPVAETAPVYMAAQAPSNDNEVGKQAV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEECCCCCCHHHHHHHH
AAAKEALGTPYLWGGTSTAGFDCSGLTQWAWRRAGVEIPRIADQQAVGRQVTYDELQEGD
HHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHCCCC
LLIWDGHVAMYAGGGQIIEAGDPVQLNPIRTSNIGMAFHGYFRPTG
EEEECCCEEEEECCCEEEECCCCEEECCCEECCCCEEEECCCCCCC
>Mature Secondary Structure
MIGLISALSRLATHEPAQLPQLAIPQAPDISAAIALGRELSANPTTLLSLFDATSQQHHL
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHH
LVTSLIQAAPLIDAARHDIATTAQHYLNQAAGLVMRSFSMNPAESFAARTELISLPGLMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHH
AEASQRLEEMSRQVQPIVEKLVQIQDLTPEPAAEPVAETAPVYMAAQAPSNDNEVGKQAV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEECCCCCCHHHHHHHH
AAAKEALGTPYLWGGTSTAGFDCSGLTQWAWRRAGVEIPRIADQQAVGRQVTYDELQEGD
HHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHCCCC
LLIWDGHVAMYAGGGQIIEAGDPVQLNPIRTSNIGMAFHGYFRPTG
EEEECCCEEEEECCCEEEECCCCEEECCCEECCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA