| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is metQ [H]
Identifier: 145294806
GI number: 145294806
Start: 831330
End: 832229
Strand: Reverse
Name: metQ [H]
Synonym: cgR_0753
Alternate gene names: 145294806
Gene position: 832229-831330 (Counterclockwise)
Preceding gene: 145294811
Following gene: 145294805
Centisome position: 25.11
GC content: 57.56
Gene sequence:
>900_bases ATGAAACTTCGTCGCATCACAACCACCGCCATCGCTGGCCTCTTCGCCGCAACCGCACTTGTTGCCTGTGGCTCCGACTC CGATGGAAGCAGCACCACTGTTTCTGAAGGCGCCGAAGGCGTAACCATCCGCATCGGCGCCACCGACGCTTCGAAGGAAG CTTGGGCCGTATTCGAAGAAAAGGCAGCAGATGAGGGCATCACCCTCGATATCGTTCCTTTCTCTGACTACTCCACCCCA AATGAAGCTCTCGCCCAGGATCAGCTGGATGTTAACCTCTTCCAGCACCTGAAGTTCCTAGCTGAGTACAACGTCGGCTC CGGCGCAGACCTCACCCCAGTTGGCTCCAGCGAAATCGTGCCACTGGCACTGTTCTGGAAGGACCACGACTCCATCGACG GCATTGACGGCGAGTCCGTTGCCATCCCTAACGATCCTTCCAACCAGGGCCGCGCCATCAACGTTCTCGTTCAGGCAGGT CTTGTCACCCTGAAGACCCCAGGTCTGGTCACCCCAGCTCCAGTCGATATCGACGAGGCAGCTTCCAAGGTTTCCGTCAT CCCAGTTGACGCAGCTCAGGCGCCAACCGCTTACCAGGAGGGTCGCCCAGCCATCATCAACAACTCCTTCCTTGACCGCG CAGGCATCGATCCAAACCTCGCGGTCTTCGAAGATGATCCTGAGTCTGAAGAAGCAGAGCCATACATCAACGTCTTCGTC ACCAAGGCTGAGGACAAAGACGATGCCAACATCGCTCGCCTCGTTGAGCTGTGGCACGACCCAGAGGTTCTGGCTGCAGT AGACCGCGACTCTGAGGGCACCTCCGTCCCAGTTGATCGTCCAGCAGCTGACCTTCAGGAAATCCTTGATCGCCTTGAGG CTGATCAGGAAAACGCATAA
Upstream 100 bases:
>100_bases CTGTACAGATAGCGGTCTAGGGTGCTAATCTCCTAAATACTTGAATGACCCTTTCGTGATCCATTCACAGAAACTTTCCC AAACAAGGACGTATTTGAAA
Downstream 100 bases:
>100_bases TCTCTTTTGAGTTCTTTGCATACCCCTGTGCAGATTTCTTTGCACAATCACAGCCTGAAAATCAGACTGTGAACTTCAAC GCCCCGCTTGGAATCTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MKLRRITTTAIAGLFAATALVACGSDSDGSSTTVSEGAEGVTIRIGATDASKEAWAVFEEKAADEGITLDIVPFSDYSTP NEALAQDQLDVNLFQHLKFLAEYNVGSGADLTPVGSSEIVPLALFWKDHDSIDGIDGESVAIPNDPSNQGRAINVLVQAG LVTLKTPGLVTPAPVDIDEAASKVSVIPVDAAQAPTAYQEGRPAIINNSFLDRAGIDPNLAVFEDDPESEEAEPYINVFV TKAEDKDDANIARLVELWHDPEVLAAVDRDSEGTSVPVDRPAADLQEILDRLEADQENA
Sequences:
>Translated_299_residues MKLRRITTTAIAGLFAATALVACGSDSDGSSTTVSEGAEGVTIRIGATDASKEAWAVFEEKAADEGITLDIVPFSDYSTP NEALAQDQLDVNLFQHLKFLAEYNVGSGADLTPVGSSEIVPLALFWKDHDSIDGIDGESVAIPNDPSNQGRAINVLVQAG LVTLKTPGLVTPAPVDIDEAASKVSVIPVDAAQAPTAYQEGRPAIINNSFLDRAGIDPNLAVFEDDPESEEAEPYINVFV TKAEDKDDANIARLVELWHDPEVLAAVDRDSEGTSVPVDRPAADLQEILDRLEADQENA >Mature_299_residues MKLRRITTTAIAGLFAATALVACGSDSDGSSTTVSEGAEGVTIRIGATDASKEAWAVFEEKAADEGITLDIVPFSDYSTP NEALAQDQLDVNLFQHLKFLAEYNVGSGADLTPVGSSEIVPLALFWKDHDSIDGIDGESVAIPNDPSNQGRAINVLVQAG LVTLKTPGLVTPAPVDIDEAASKVSVIPVDAAQAPTAYQEGRPAIINNSFLDRAGIDPNLAVFEDDPESEEAEPYINVFV TKAEDKDDANIARLVELWHDPEVLAAVDRDSEGTSVPVDRPAADLQEILDRLEADQENA
Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]
COG id: COG1464
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nlpA lipoprotein family [H]
Homologues:
Organism=Escherichia coli, GI1786396, Length=282, Percent_Identity=30.1418439716312, Blast_Score=138, Evalue=4e-34, Organism=Escherichia coli, GI1790093, Length=241, Percent_Identity=31.1203319502075, Blast_Score=124, Evalue=5e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004872 - InterPro: IPR004478 [H]
Pfam domain/function: PF03180 Lipoprotein_9 [H]
EC number: NA
Molecular weight: Translated: 31697; Mature: 31697
Theoretical pI: Translated: 3.82; Mature: 3.82
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRRITTTAIAGLFAATALVACGSDSDGSSTTVSEGAEGVTIRIGATDASKEAWAVFEE CCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHH KAADEGITLDIVPFSDYSTPNEALAQDQLDVNLFQHLKFLAEYNVGSGADLTPVGSSEIV HHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE PLALFWKDHDSIDGIDGESVAIPNDPSNQGRAINVLVQAGLVTLKTPGLVTPAPVDIDEA EEEEEECCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCHHHH ASKVSVIPVDAAQAPTAYQEGRPAIINNSFLDRAGIDPNLAVFEDDPESEEAEPYINVFV HCEEEEEEECCCCCCCHHHCCCCEEECCCCHHHCCCCCCEEEECCCCCCCCCCCEEEEEE TKAEDKDDANIARLVELWHDPEVLAAVDRDSEGTSVPVDRPAADLQEILDRLEADQENA EECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKLRRITTTAIAGLFAATALVACGSDSDGSSTTVSEGAEGVTIRIGATDASKEAWAVFEE CCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHH KAADEGITLDIVPFSDYSTPNEALAQDQLDVNLFQHLKFLAEYNVGSGADLTPVGSSEIV HHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE PLALFWKDHDSIDGIDGESVAIPNDPSNQGRAINVLVQAGLVTLKTPGLVTPAPVDIDEA EEEEEECCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCHHHH ASKVSVIPVDAAQAPTAYQEGRPAIINNSFLDRAGIDPNLAVFEDDPESEEAEPYINVFV HCEEEEEEECCCCCCCHHHCCCCEEECCCCHHHCCCCCCEEEECCCCCCCCCCCEEEEEE TKAEDKDDANIARLVELWHDPEVLAAVDRDSEGTSVPVDRPAADLQEILDRLEADQENA EECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]