Click here to switch to the map view.

The map label for this gene is fdx [C]

Identifier: 145294714

GI number: 145294714

Start: 720013

End: 720333

Strand: Reverse

Name: fdx [C]

Synonym: cgR_0662

Alternate gene names: 145294714

Gene position: 720333-720013 (Counterclockwise)

Preceding gene: 145294715

Following gene: 145294713

Centisome position: 21.73

GC content: 52.96

Gene sequence:

>321_bases
ATGTCTACTATTCATTTCATTGATCATGCTGGCGAAACCCGCACCATCGAGGCGACTGTTGGTGATTCGGTAATGGAGAC
CGCAGTCCGAAACGGCGTGCCTGGAATTGTTGCTGAATGCGGCGGTTCCTTATCGTGTGCAACCTGCCATGTGTTTGTTG
ACCCTGCACAGTATGATGCGCTTCCCCCAATGGAGGAGATGGAAGATGAAATGCTGTGGGGTGCTGCCGTGGACCGTGAG
GATTGCTCCCGTTTGTCTTGCCAAATCAAGGTCACCGAAGGCATGGATCTTTCGGTGACCACGCCAGAAACGCAAGTGTG
A

Upstream 100 bases:

>100_bases
TCCTTGCATCCCCAGAAGCCGAATACATCACTGGGCAAACGCTCATCGTTGATGGCGGCCGACAGTTCATCTAAGTACTA
AAAGTTCTAAGGAGAAGATC

Downstream 100 bases:

>100_bases
GGTTGAATCATGAATACTTCAGCTGAAACTGGAATCTTGATCATCGGCGCAAACCAATCGGGTGTGCAGCTGGCAATTTC
CCTGCGGGCCACGGGTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Ferredoxin VI; FdVI [H]

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSTIHFIDHAGETRTIEATVGDSVMETAVRNGVPGIVAECGGSLSCATCHVFVDPAQYDALPPMEEMEDEMLWGAAVDRE
DCSRLSCQIKVTEGMDLSVTTPETQV

Sequences:

>Translated_106_residues
MSTIHFIDHAGETRTIEATVGDSVMETAVRNGVPGIVAECGGSLSCATCHVFVDPAQYDALPPMEEMEDEMLWGAAVDRE
DCSRLSCQIKVTEGMDLSVTTPETQV
>Mature_105_residues
STIHFIDHAGETRTIEATVGDSVMETAVRNGVPGIVAECGGSLSCATCHVFVDPAQYDALPPMEEMEDEMLWGAAVDRED
CSRLSCQIKVTEGMDLSVTTPETQV

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI4758352, Length=105, Percent_Identity=40.9523809523809, Blast_Score=72, Evalue=9e-14,
Organism=Homo sapiens, GI72534754, Length=87, Percent_Identity=44.8275862068966, Blast_Score=71, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17544202, Length=102, Percent_Identity=44.1176470588235, Blast_Score=69, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6325004, Length=101, Percent_Identity=39.6039603960396, Blast_Score=68, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24661503, Length=100, Percent_Identity=39, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 11393; Mature: 11262

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
10.4 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIHFIDHAGETRTIEATVGDSVMETAVRNGVPGIVAECGGSLSCATCHVFVDPAQYDA
CCEEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCHHHHCCCCCEEEEEEEEECCHHCCC
LPPMEEMEDEMLWGAAVDREDCSRLSCQIKVTEGMDLSVTTPETQV
CCCHHHHHHHHHHCCCCCHHCCCCEEEEEEECCCCEEEECCCCCCC
>Mature Secondary Structure 
STIHFIDHAGETRTIEATVGDSVMETAVRNGVPGIVAECGGSLSCATCHVFVDPAQYDA
CEEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCHHHHCCCCCEEEEEEEEECCHHCCC
LPPMEEMEDEMLWGAAVDREDCSRLSCQIKVTEGMDLSVTTPETQV
CCCHHHHHHHHHHCCCCCHHCCCCEEEEEEECCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026503; 11173487 [H]