| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is 145294684
Identifier: 145294684
GI number: 145294684
Start: 693384
End: 694532
Strand: Reverse
Name: 145294684
Synonym: cgR_0632
Alternate gene names: NA
Gene position: 694532-693384 (Counterclockwise)
Preceding gene: 145294685
Following gene: 145294683
Centisome position: 20.96
GC content: 53.44
Gene sequence:
>1149_bases GTGAAATGGATTAAGCGATATGTGCTGTCCCGGCGGATGGTTCATCCCTGGGCGTGGTGGGTGTGGGCGTTAGGAATTGC TGGTTGTGCCAGCATGACCAACAATCCTTATATTTTGGCGCTCACTTTTGCCACGTTGTGTTTTGTGGTGTTTAACCGTC GTGGGTCATCGCCGTGGTCGCGTGCTTTCCCGATCTATTTGATGATCGCGGGTTGGCTCGTGGTGTACCGGTTGGTCATG CACATTGTGGTGGGAGCAAAAATTGGCACCATTGAACTGTTTCGGATCCCGCCGGTGCAGTTGCCGGAATGGGCTGCGGG TATCCACGTGTTTGGCACGGTGTATCTCGAGGGTCTGATCATCGCGACGACGCAAGGCTTAACGCTTGGAACGATGATCG TGGCGGTGGGTGCTGCGAACTCTTTGGCGGATCCCAAGAAGCTGCTCAAATCGTTGCCTGGCGCATTGGGCGAACTGGGA ACTGCGGTGGTCATCGGTATTTCCATTGCACCTCAGATGGCTGAGTCGGCGTTCCGCATTAATCGTGCACGTACCTTGCG CGGTGATGATGCCAGAGGTGTTCGCGGTTTCGCACGGATTTTGATGCCAGTTTTCCAAGACACTTTGGATAGATCTTTGG CCTTGGCTAATTCGATGGATGCACGTGGCTACGGCAGGCAGGCTCATGTATCCAAATTCCAACAGCGTGTGACCTCTATT TTTGGTGCATTGGGAATACTCGGCGTGACCGTTGGTCTGTTTGTGGTCTTAGACGCATCATCACCGATGTTCGTTGCCGT TCCGGTGTTTATTACCGGCGTGGGCTTCTTGATCATTTCCCTGGTCGTTGCTTCACATAGAAAAACATCCACCACTTTTG ATCAATTGCCGTGGGGCGCTGCGGAATGGCTGGTGTGCATCACGGGTGTCATACCGCTGCTCATGGCTGCACTGACCAGA TACATTGATCCAGGTTCCATGATCACCACCTGGGTTCCTTTGCACATGCCAGACACCGTTCCGTTGCTCGTTGTGGCGGG ACTTGTTGTGGCGACGATGCCAGGATTCTTGACGCCCCGCTTGCCGAAGAACAAAGTGAGGGTCAAGCGTCGAAAAGCAA TAAATAGCCCAGAAAGGGCCGAAGTTTAA
Upstream 100 bases:
>100_bases ATGGATCATTGGACTCACACTGGCTGTCATTTCCTTGGTTTCAGCGTCTGCTGTGGCGGCGTGGGCGATTCGTCGTTCAG AGGTCCAGGGTTAAAGCTTC
Downstream 100 bases:
>100_bases TGAGTGCTCCTTTTAGCGCGCGCACTGCGTGGTCGACGGACCCGGTGCTGGAACTGGAAAGCGTGGCTGCCTCGTATTAT GACGATGAGCGCACGCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: ABC Transporter-Associated Permease; Cobalt Transporter; Cobalt ABC Transporter Permease CbiQ; Permease Component Of ABC-Type Cobalt Transport System
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MKWIKRYVLSRRMVHPWAWWVWALGIAGCASMTNNPYILALTFATLCFVVFNRRGSSPWSRAFPIYLMIAGWLVVYRLVM HIVVGAKIGTIELFRIPPVQLPEWAAGIHVFGTVYLEGLIIATTQGLTLGTMIVAVGAANSLADPKKLLKSLPGALGELG TAVVIGISIAPQMAESAFRINRARTLRGDDARGVRGFARILMPVFQDTLDRSLALANSMDARGYGRQAHVSKFQQRVTSI FGALGILGVTVGLFVVLDASSPMFVAVPVFITGVGFLIISLVVASHRKTSTTFDQLPWGAAEWLVCITGVIPLLMAALTR YIDPGSMITTWVPLHMPDTVPLLVVAGLVVATMPGFLTPRLPKNKVRVKRRKAINSPERAEV
Sequences:
>Translated_382_residues MKWIKRYVLSRRMVHPWAWWVWALGIAGCASMTNNPYILALTFATLCFVVFNRRGSSPWSRAFPIYLMIAGWLVVYRLVM HIVVGAKIGTIELFRIPPVQLPEWAAGIHVFGTVYLEGLIIATTQGLTLGTMIVAVGAANSLADPKKLLKSLPGALGELG TAVVIGISIAPQMAESAFRINRARTLRGDDARGVRGFARILMPVFQDTLDRSLALANSMDARGYGRQAHVSKFQQRVTSI FGALGILGVTVGLFVVLDASSPMFVAVPVFITGVGFLIISLVVASHRKTSTTFDQLPWGAAEWLVCITGVIPLLMAALTR YIDPGSMITTWVPLHMPDTVPLLVVAGLVVATMPGFLTPRLPKNKVRVKRRKAINSPERAEV >Mature_382_residues MKWIKRYVLSRRMVHPWAWWVWALGIAGCASMTNNPYILALTFATLCFVVFNRRGSSPWSRAFPIYLMIAGWLVVYRLVM HIVVGAKIGTIELFRIPPVQLPEWAAGIHVFGTVYLEGLIIATTQGLTLGTMIVAVGAANSLADPKKLLKSLPGALGELG TAVVIGISIAPQMAESAFRINRARTLRGDDARGVRGFARILMPVFQDTLDRSLALANSMDARGYGRQAHVSKFQQRVTSI FGALGILGVTVGLFVVLDASSPMFVAVPVFITGVGFLIISLVVASHRKTSTTFDQLPWGAAEWLVCITGVIPLLMAALTR YIDPGSMITTWVPLHMPDTVPLLVVAGLVVATMPGFLTPRLPKNKVRVKRRKAINSPERAEV
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41657; Mature: 41657
Theoretical pI: Translated: 11.17; Mature: 11.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWIKRYVLSRRMVHPWAWWVWALGIAGCASMTNNPYILALTFATLCFVVFNRRGSSPWS CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCCCH RAFPIYLMIAGWLVVYRLVMHIVVGAKIGTIELFRIPPVQLPEWAAGIHVFGTVYLEGLI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCEE IATTQGLTLGTMIVAVGAANSLADPKKLLKSLPGALGELGTAVVIGISIAPQMAESAFRI EEEECCCHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHCCHHEEEEECCCHHHHHHHHHH NRARTLRGDDARGVRGFARILMPVFQDTLDRSLALANSMDARGYGRQAHVSKFQQRVTSI HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH FGALGILGVTVGLFVVLDASSPMFVAVPVFITGVGFLIISLVVASHRKTSTTFDQLPWGA HHHHHHHHHHHHHHEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCH AEWLVCITGVIPLLMAALTRYIDPGSMITTWVPLHMPDTVPLLVVAGLVVATMPGFLTPR HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC LPKNKVRVKRRKAINSPERAEV CCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKWIKRYVLSRRMVHPWAWWVWALGIAGCASMTNNPYILALTFATLCFVVFNRRGSSPWS CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCCCH RAFPIYLMIAGWLVVYRLVMHIVVGAKIGTIELFRIPPVQLPEWAAGIHVFGTVYLEGLI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCEE IATTQGLTLGTMIVAVGAANSLADPKKLLKSLPGALGELGTAVVIGISIAPQMAESAFRI EEEECCCHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHCCHHEEEEECCCHHHHHHHHHH NRARTLRGDDARGVRGFARILMPVFQDTLDRSLALANSMDARGYGRQAHVSKFQQRVTSI HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH FGALGILGVTVGLFVVLDASSPMFVAVPVFITGVGFLIISLVVASHRKTSTTFDQLPWGA HHHHHHHHHHHHHHEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCH AEWLVCITGVIPLLMAALTRYIDPGSMITTWVPLHMPDTVPLLVVAGLVVATMPGFLTPR HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC LPKNKVRVKRRKAINSPERAEV CCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA