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The map label for this gene is fdhD [H]

Identifier: 145294678

GI number: 145294678

Start: 686078

End: 687019

Strand: Reverse

Name: fdhD [H]

Synonym: cgR_0626

Alternate gene names: 145294678

Gene position: 687019-686078 (Counterclockwise)

Preceding gene: 145294679

Following gene: 145294677

Centisome position: 20.73

GC content: 51.8

Gene sequence:

>942_bases
ATGGGTCGGATTACCCAAAACTTGCAGGTCCCACGCGTTGTATCCACTGACGAGCAAGTTTTTGTTAACACTCGTCCGGA
TACTGTTGCGGTGGAGGAACCTCTAGAAATTCGGGTTAATGGCACTGCCCTTACCACCACCATGCGCACGCCCGGCCATG
ATATTGAGTTGGTGCATGGCCTCCTATTGGCAGAAGGTCTGATCACGGATGCCTCTGAGGTTTTTACCGCCCGGTATTGT
GCAGGAGCTGTTGGCCCAGATAATCAAAATACGTACAACGTCTTAGAACTTGATGTCATCCCCAAAGACAATCCGGCCCG
GGATCCCGCCCAGAATCTCGCCCAGAATCTCGCCCAGAATCTCGCCCAGAATCTCGAAGGCAGCCAACACGAAGCACCCC
ACATCCCAACTTTCCAACCGGTACGCGAACTAAACCTCGTGGCAGCCCAACGCAATGTGCTGACTACGTCTGCTTGTGGT
GTTTGTGGCACGACATCTATTGAGCAGTTGATGAACAAGAAGGGCTGGCCCATTACTCCGATTACACCAGATCCGCGGAT
GATTGTGTCGTTGCCAGATAAGTTGAAGTCGAAGCAGAAGATTTTCGACAAAACTGGTGGGGTTCATGCTGCTGGTTTGG
CCACGCTTGATGGTGAGATGCTGATTGTTCGAGAGGATGTCGGTCGGCATAACGCAGCTGACAAAGTTATAGGAAACATG
CTGATGGCGGGAAAGCTCCCCTTGGAAAACACTATTTTGGTGATGAGTTCCAGGGCGTCTTTTGAGCTTGTCCAAAAGGC
TGCCATGGCTGGAATTTCGGGTGTAATCGCTGTTGGTGCTGCAACATCGCTGGCAATCGAGGCGGCGCAGGATGCAGGTA
TTTTCCTTTCTGGTTTTGTTCGGGGCAACAAGTTTAACCACTATGCGGGCGAGCTCGGATAA

Upstream 100 bases:

>100_bases
GTTCTGGAACAAGCACTGATGATTGGGCCGAGTCCACGTTGGTTAATGCTCTGCATCTTCAAGAAATCATCGCTAAAAAT
TACCCGGAGGCTAAATAAAA

Downstream 100 bases:

>100_bases
TGCCAGAACAGGCAGAACAGCCGAATCAAGCACGCGAAGAGCTGGAGAGGATTTTCCCGCAGTGGTTCGTGTCAGCTGCA
GAGAACAGGGATATGTCTGT

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MGRITQNLQVPRVVSTDEQVFVNTRPDTVAVEEPLEIRVNGTALTTTMRTPGHDIELVHGLLLAEGLITDASEVFTARYC
AGAVGPDNQNTYNVLELDVIPKDNPARDPAQNLAQNLAQNLAQNLEGSQHEAPHIPTFQPVRELNLVAAQRNVLTTSACG
VCGTTSIEQLMNKKGWPITPITPDPRMIVSLPDKLKSKQKIFDKTGGVHAAGLATLDGEMLIVREDVGRHNAADKVIGNM
LMAGKLPLENTILVMSSRASFELVQKAAMAGISGVIAVGAATSLAIEAAQDAGIFLSGFVRGNKFNHYAGELG

Sequences:

>Translated_313_residues
MGRITQNLQVPRVVSTDEQVFVNTRPDTVAVEEPLEIRVNGTALTTTMRTPGHDIELVHGLLLAEGLITDASEVFTARYC
AGAVGPDNQNTYNVLELDVIPKDNPARDPAQNLAQNLAQNLAQNLEGSQHEAPHIPTFQPVRELNLVAAQRNVLTTSACG
VCGTTSIEQLMNKKGWPITPITPDPRMIVSLPDKLKSKQKIFDKTGGVHAAGLATLDGEMLIVREDVGRHNAADKVIGNM
LMAGKLPLENTILVMSSRASFELVQKAAMAGISGVIAVGAATSLAIEAAQDAGIFLSGFVRGNKFNHYAGELG
>Mature_312_residues
GRITQNLQVPRVVSTDEQVFVNTRPDTVAVEEPLEIRVNGTALTTTMRTPGHDIELVHGLLLAEGLITDASEVFTARYCA
GAVGPDNQNTYNVLELDVIPKDNPARDPAQNLAQNLAQNLAQNLEGSQHEAPHIPTFQPVRELNLVAAQRNVLTTSACGV
CGTTSIEQLMNKKGWPITPITPDPRMIVSLPDKLKSKQKIFDKTGGVHAAGLATLDGEMLIVREDVGRHNAADKVIGNML
MAGKLPLENTILVMSSRASFELVQKAAMAGISGVIAVGAATSLAIEAAQDAGIFLSGFVRGNKFNHYAGELG

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=289, Percent_Identity=30.7958477508651, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 33417; Mature: 33285

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRITQNLQVPRVVSTDEQVFVNTRPDTVAVEEPLEIRVNGTALTTTMRTPGHDIELVHG
CCCCCCCCCCCEEECCCCEEEEECCCCEEEECCCEEEEECCEEEEEEECCCCCHHHHHHH
LLLAEGLITDASEVFTARYCAGAVGPDNQNTYNVLELDVIPKDNPARDPAQNLAQNLAQN
HHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHH
LAQNLEGSQHEAPHIPTFQPVRELNLVAAQRNVLTTSACGVCGTTSIEQLMNKKGWPITP
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHCCCCCCCCC
ITPDPRMIVSLPDKLKSKQKIFDKTGGVHAAGLATLDGEMLIVREDVGRHNAADKVIGNM
CCCCCCEEEECCHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEECCCCCCCHHHHHHHHH
LMAGKLPLENTILVMSSRASFELVQKAAMAGISGVIAVGAATSLAIEAAQDAGIFLSGFV
HHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHCCHHHHEEEHHCCCCEEEEEEE
RGNKFNHYAGELG
ECCCCCCCCCCCC
>Mature Secondary Structure 
GRITQNLQVPRVVSTDEQVFVNTRPDTVAVEEPLEIRVNGTALTTTMRTPGHDIELVHG
CCCCCCCCCCEEECCCCEEEEECCCCEEEECCCEEEEECCEEEEEEECCCCCHHHHHHH
LLLAEGLITDASEVFTARYCAGAVGPDNQNTYNVLELDVIPKDNPARDPAQNLAQNLAQN
HHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHH
LAQNLEGSQHEAPHIPTFQPVRELNLVAAQRNVLTTSACGVCGTTSIEQLMNKKGWPITP
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHCCCCCCCCC
ITPDPRMIVSLPDKLKSKQKIFDKTGGVHAAGLATLDGEMLIVREDVGRHNAADKVIGNM
CCCCCCEEEECCHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEECCCCCCCHHHHHHHHH
LMAGKLPLENTILVMSSRASFELVQKAAMAGISGVIAVGAATSLAIEAAQDAGIFLSGFV
HHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHCCHHHHEEEHHCCCCEEEEEEE
RGNKFNHYAGELG
ECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12840036 [H]