| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145294644
Identifier: 145294644
GI number: 145294644
Start: 662103
End: 663023
Strand: Reverse
Name: 145294644
Synonym: cgR_0594
Alternate gene names: NA
Gene position: 663023-662103 (Counterclockwise)
Preceding gene: 145294650
Following gene: 145294630
Centisome position: 20.01
GC content: 53.75
Gene sequence:
>921_bases GTGTCCAGACACGCAAAAAAAGGGGGCTCTTTTTGGGGCCCGACCAAACGTGTCACGGACAACCTCATCAAATGCAAACA TGCGCCACCGCGTCCCGGAAAACCAGGGGCGATACCGCGCTTGAGTGCGAGGTGCCGTCAGTTCCCAACTACAAGAGTGG GACTCAGCCGTTCACATTATCAGCTAGCCGCAGAAAACACCAAATCCCTTGTTAGAATGGTTCCCATGACTGTTCCTCAA GGAAACGAACCAGCAAAGAAACTCGCCACTGACCTTAACCGAAACCAAGTCGTGGATGAACTTTCTGCAGCTGTTTCCCG AGGTCAACTCACTTTGGAAGAATTTGAAGATCGCTCCTCCAAAGCATGGAATGCCCGCCACTTAGACACTCTTGTAGAGC TGATCTCTGATGTGAACGACAATCCCTACACTCTGCTTGGTCAGCAATTTCCCGGCGCCTCCTATGCGCCGGCGGCCTAC GAGACCACTCCCCCAGCGATGCCCAATGTGTCAGATCCTGTAAATATTGTCCGCAACAGGATTACCGGCAACCCGAATGG ATCCAAAATGTCGGTCTCGTTTATGGGCGGCACCGTGCGCAAAGGTGGATGGCATGTGCCTAATGTTCACACATCCTTCG CCATGATGGGCGGCAATCAAATCGATTTGCGCGACGCCTTCCTGGAGAGCGACCGAATTCAGATCAACGCCTACACATTC ATGGGCGGCATCGAGATCATCGTTCCCGAAGGCGTTTTTGTCATTTGTGACGGCATCGGCATTTTCGGTGGCTTCGAGCA GTCTGTGGACAAGGCCGGTGCGCTCAATCCCGCGCGCCTTCCAAACAATGCGCCCACGGTCCACGTCAAGGGCCTGGCGT TCATGGGCGGAGTCAGCGTAGTCACCAAGAAAAACATTTAA
Upstream 100 bases:
>100_bases ATGAACCATCCTTATTTCGGAGTTGTTCTTTAACTGCTGACGTGACGCCCGGGGGACGAACACGAAGGCTGAGCTTGTCG ATGGCGAAGGATTTGAAAAA
Downstream 100 bases:
>100_bases AAAGCTTGTCGACGCGCCCCTCCACCACCTAAAAGTAAATGCTCAACACATACCCCGGTGCACTATTGAGATTAAACGTC TCGTATTCGTAGACCCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSRHAKKGGSFWGPTKRVTDNLIKCKHAPPRPGKPGAIPRLSARCRQFPTTRVGLSRSHYQLAAENTKSLVRMVPMTVPQ GNEPAKKLATDLNRNQVVDELSAAVSRGQLTLEEFEDRSSKAWNARHLDTLVELISDVNDNPYTLLGQQFPGASYAPAAY ETTPPAMPNVSDPVNIVRNRITGNPNGSKMSVSFMGGTVRKGGWHVPNVHTSFAMMGGNQIDLRDAFLESDRIQINAYTF MGGIEIIVPEGVFVICDGIGIFGGFEQSVDKAGALNPARLPNNAPTVHVKGLAFMGGVSVVTKKNI
Sequences:
>Translated_306_residues MSRHAKKGGSFWGPTKRVTDNLIKCKHAPPRPGKPGAIPRLSARCRQFPTTRVGLSRSHYQLAAENTKSLVRMVPMTVPQ GNEPAKKLATDLNRNQVVDELSAAVSRGQLTLEEFEDRSSKAWNARHLDTLVELISDVNDNPYTLLGQQFPGASYAPAAY ETTPPAMPNVSDPVNIVRNRITGNPNGSKMSVSFMGGTVRKGGWHVPNVHTSFAMMGGNQIDLRDAFLESDRIQINAYTF MGGIEIIVPEGVFVICDGIGIFGGFEQSVDKAGALNPARLPNNAPTVHVKGLAFMGGVSVVTKKNI >Mature_305_residues SRHAKKGGSFWGPTKRVTDNLIKCKHAPPRPGKPGAIPRLSARCRQFPTTRVGLSRSHYQLAAENTKSLVRMVPMTVPQG NEPAKKLATDLNRNQVVDELSAAVSRGQLTLEEFEDRSSKAWNARHLDTLVELISDVNDNPYTLLGQQFPGASYAPAAYE TTPPAMPNVSDPVNIVRNRITGNPNGSKMSVSFMGGTVRKGGWHVPNVHTSFAMMGGNQIDLRDAFLESDRIQINAYTFM GGIEIIVPEGVFVICDGIGIFGGFEQSVDKAGALNPARLPNNAPTVHVKGLAFMGGVSVVTKKNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012551 [H]
Pfam domain/function: PF08044 DUF1707 [H]
EC number: NA
Molecular weight: Translated: 33132; Mature: 33001
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHAKKGGSFWGPTKRVTDNLIKCKHAPPRPGKPGAIPRLSARCRQFPTTRVGLSRSHY CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHCCCCCHH QLAAENTKSLVRMVPMTVPQGNEPAKKLATDLNRNQVVDELSAAVSRGQLTLEEFEDRSS HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCEEHHHHHCCCC KAWNARHLDTLVELISDVNDNPYTLLGQQFPGASYAPAAYETTPPAMPNVSDPVNIVRNR CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH ITGNPNGSKMSVSFMGGTVRKGGWHVPNVHTSFAMMGGNQIDLRDAFLESDRIQINAYTF CCCCCCCCEEEEEEECCEECCCCEECCCCCCEEEEECCCEEEHHHHHHCCCCEEEEEEEE MGGIEIIVPEGVFVICDGIGIFGGFEQSVDKAGALNPARLPNNAPTVHVKGLAFMGGVSV ECCEEEEECCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECEEEECCEEE VTKKNI EEECCC >Mature Secondary Structure SRHAKKGGSFWGPTKRVTDNLIKCKHAPPRPGKPGAIPRLSARCRQFPTTRVGLSRSHY CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHCCCCCHH QLAAENTKSLVRMVPMTVPQGNEPAKKLATDLNRNQVVDELSAAVSRGQLTLEEFEDRSS HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCEEHHHHHCCCC KAWNARHLDTLVELISDVNDNPYTLLGQQFPGASYAPAAYETTPPAMPNVSDPVNIVRNR CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH ITGNPNGSKMSVSFMGGTVRKGGWHVPNVHTSFAMMGGNQIDLRDAFLESDRIQINAYTF CCCCCCCCEEEEEEECCEECCCCEECCCCCCEEEEECCCEEEHHHHHHCCCCEEEEEEEE MGGIEIIVPEGVFVICDGIGIFGGFEQSVDKAGALNPARLPNNAPTVHVKGLAFMGGVSV ECCEEEEECCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECEEEECCEEE VTKKNI EEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]