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The map label for this gene is ycdI [C]

Identifier: 145294463

GI number: 145294463

Start: 456235

End: 456816

Strand: Reverse

Name: ycdI [C]

Synonym: cgR_0418

Alternate gene names: 145294463

Gene position: 456816-456235 (Counterclockwise)

Preceding gene: 145294465

Following gene: 145294462

Centisome position: 13.78

GC content: 54.64

Gene sequence:

>582_bases
ATGTCACTTTCAGTCGTCGAGGCGATTACCAACCGCCGCGCTACCCGCAAATACACCGATGAAGCGCCTACCCCGGAGCT
GATCGACAAAATCGTTGACCTTGCCCTGGAGGCACCCAGTGCGTTCAATGCGCAGCAGCGTGAAATTGTTGTGATTACTG
ATCCCGCACAGAAGCAGAAGCTTTACGAGGCCTCCCATCAGAAACAATTCCTCACCGCACCTGTAACTTTCATTGCGGTT
GCCCGCGTGGAAAATGAGCCTGAGGATTTGGAAGAGATTCTTGGTGCAGAAAGGGCTGAACGTGTCGCGGGTTTCATCAA
TGGTCGCAGCATTCAGCAGGCACGCGAAGCAACGTTGAGGGATGCCAGCCTCGCGGCGGCTTTCCTAATTTTGGCTGCCC
AGGCGGAGGGCTTGAGCACCAGCCCGACTACTGGTTGGGATGAGAAAAAAGTGAAGGAAGCAATCGGCATCGGTGGGCGT
GACGATCGTGCAATTGCCCTGGTTATTGCTACCGGATTCCCTAATGAACAGCCGGAGCACCCTGGTCGTTTGCAGAATAG
GCGCATCGACAACAGCTACTAA

Upstream 100 bases:

>100_bases
AACCAGCCAGAAACTATCTCCAAAAGCTAATAAAACCCTTGCACTGACAAATAAGGCGACCTACCATGACTCTGTTTCCA
ACACATGAAAAGGATAAAAA

Downstream 100 bases:

>100_bases
CTCTGCCAGCTCGCCCGGACGAACTAAGGTAGACGGCATGACTTCTTTGCTTGTGACCGGAGGTGCCGGATTTATCGGCG
CCAACTTCGTCCGCCAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: Dehydrogenase

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSLSVVEAITNRRATRKYTDEAPTPELIDKIVDLALEAPSAFNAQQREIVVITDPAQKQKLYEASHQKQFLTAPVTFIAV
ARVENEPEDLEEILGAERAERVAGFINGRSIQQAREATLRDASLAAAFLILAAQAEGLSTSPTTGWDEKKVKEAIGIGGR
DDRAIALVIATGFPNEQPEHPGRLQNRRIDNSY

Sequences:

>Translated_193_residues
MSLSVVEAITNRRATRKYTDEAPTPELIDKIVDLALEAPSAFNAQQREIVVITDPAQKQKLYEASHQKQFLTAPVTFIAV
ARVENEPEDLEEILGAERAERVAGFINGRSIQQAREATLRDASLAAAFLILAAQAEGLSTSPTTGWDEKKVKEAIGIGGR
DDRAIALVIATGFPNEQPEHPGRLQNRRIDNSY
>Mature_192_residues
SLSVVEAITNRRATRKYTDEAPTPELIDKIVDLALEAPSAFNAQQREIVVITDPAQKQKLYEASHQKQFLTAPVTFIAVA
RVENEPEDLEEILGAERAERVAGFINGRSIQQAREATLRDASLAAAFLILAAQAEGLSTSPTTGWDEKKVKEAIGIGGRD
DRAIALVIATGFPNEQPEHPGRLQNRRIDNSY

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 21177; Mature: 21046

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSVVEAITNRRATRKYTDEAPTPELIDKIVDLALEAPSAFNAQQREIVVITDPAQKQK
CCHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHH
LYEASHQKQFLTAPVTFIAVARVENEPEDLEEILGAERAERVAGFINGRSIQQAREATLR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHH
DASLAAAFLILAAQAEGLSTSPTTGWDEKKVKEAIGIGGRDDRAIALVIATGFPNEQPEH
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCC
PGRLQNRRIDNSY
CCCHHHCCCCCCC
>Mature Secondary Structure 
SLSVVEAITNRRATRKYTDEAPTPELIDKIVDLALEAPSAFNAQQREIVVITDPAQKQK
CHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHH
LYEASHQKQFLTAPVTFIAVARVENEPEDLEEILGAERAERVAGFINGRSIQQAREATLR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHH
DASLAAAFLILAAQAEGLSTSPTTGWDEKKVKEAIGIGGRDDRAIALVIATGFPNEQPEH
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCC
PGRLQNRRIDNSY
CCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Fmn (Potential) [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA