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The map label for this gene is ygaV [C]

Identifier: 145294383

GI number: 145294383

Start: 376486

End: 376761

Strand: Reverse

Name: ygaV [C]

Synonym: cgR_0338

Alternate gene names: 145294383

Gene position: 376761-376486 (Counterclockwise)

Preceding gene: 145294387

Following gene: 145294382

Centisome position: 11.37

GC content: 51.81

Gene sequence:

>276_bases
GTGGACGATGCCGAACGCTATGCCGAGATTTTCAAAGTGCTCGGTGAGCCAGTTCGTTTAAGAATCCTGTCCCATCTTGC
AGCAGAAGGTTGCACCCCCACTACGGTCAACGAACTCACTGAGATCATGGGATTAAGTCAACCCACCATCTCCCACCACC
TGAAAAAGATGACTGACGCCGGCCTGTTGGCAAGAATCCCTGAAGGTCGTACCGTCTTCCATCAAGTTCAACCGGAGACG
TTCACCAGCCTGCGCACAATCCTTCAAATTGGCTAA

Upstream 100 bases:

>100_bases
TCGATGTACGTCAATATATAATGACGGACATGACCGCGCCCATCCACTACCGCTCATTAACTCCGCAGAGTGTTGCCCAC
TGGCAGCAGAACCACTCAGC

Downstream 100 bases:

>100_bases
AATAAATAGATACAGAACACATTCCATTACCGAGAATTATCAAATCTCATACATTAGTCTCGTAGGGGCAATCTCATTTT
CCATGCAGTATTTTTAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; ArsR-Family Transcriptional Regulator; ArsR Family Regulatory Protein; Transcription Regulator ArsR; ArsR Arsenic Resistance Operon Repressor; Arsr Family Transcriptional Regulator; Transcription Regulator

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MDDAERYAEIFKVLGEPVRLRILSHLAAEGCTPTTVNELTEIMGLSQPTISHHLKKMTDAGLLARIPEGRTVFHQVQPET
FTSLRTILQIG

Sequences:

>Translated_91_residues
MDDAERYAEIFKVLGEPVRLRILSHLAAEGCTPTTVNELTEIMGLSQPTISHHLKKMTDAGLLARIPEGRTVFHQVQPET
FTSLRTILQIG
>Mature_91_residues
MDDAERYAEIFKVLGEPVRLRILSHLAAEGCTPTTVNELTEIMGLSQPTISHHLKKMTDAGLLARIPEGRTVFHQVQPET
FTSLRTILQIG

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10141; Mature: 10141

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDAERYAEIFKVLGEPVRLRILSHLAAEGCTPTTVNELTEIMGLSQPTISHHLKKMTDA
CCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCC
GLLARIPEGRTVFHQVQPETFTSLRTILQIG
CHHHCCCCCCHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MDDAERYAEIFKVLGEPVRLRILSHLAAEGCTPTTVNELTEIMGLSQPTISHHLKKMTDA
CCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCC
GLLARIPEGRTVFHQVQPETFTSLRTILQIG
CHHHCCCCCCHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA