| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is leuA
Identifier: 145294368
GI number: 145294368
Start: 357357
End: 359207
Strand: Reverse
Name: leuA
Synonym: cgR_0323
Alternate gene names: 145294368
Gene position: 359207-357357 (Counterclockwise)
Preceding gene: 145294371
Following gene: 145294367
Centisome position: 10.84
GC content: 58.18
Gene sequence:
>1851_bases ATGTCTCCTAACGATGCATTCATCTCCGCACCTGCCAAGATCGAAACCCCAGTTGGGCCTCGCAATGAAGGCCAGCCAGC ATGGAATAAGCAGCGTGGCTCCTCAATGCCAGTTAACCGCTACATGCCTTTCGAGGTTGAGGTAGAAGATATTTCTCTGC CGGACCGCACTTGGCCAGATAAAAAAATCACCGTTGCACCTCAGTGGTGTGCTGTTGACCTGCGTGACGGCAACCAGGCT CTGATTGATCCGATGTCTCCTGAGCGTAAGCGCCGCATGTTTGAGCTGCTGGTTCAGATGGGCTTCAAGGAAATCGAAGT CGGTTTCCCTTCAGCTTCCCAGACTGATTTTGATTTCGTTCGTGAGATCATCGAAAAGGACATGATCCCTGACGATGTCA CCATTCAGGTTCTGGTTCAGGCTCGTGAGCACCTGATTCGCCGCACTTTTGAGGCATGTGAAGGCGCCAAGAACGTTATT GTGCACTTCTACAACTCCACGTCCATCCTGCAGCGCAACGTTGTGTTCCGCATGGACAAGGACCAGGTAAAGAAGCTGGC TACCGATGCCGCTGAACTGATCAAGACCATCGCGCAGGACTACCCAGACACCAACTGGCGCTGGCAGTACTCCCCTGAGT CCTTCACCGGCACTGAGGTTGAGTACGCCAAGGAAGTTGTGGACGCCGTTGTTGAGGTCATGGATCCAACTCCTGAGAAC CCAATGATCATCAACCTGCCTTCCACCGTTGAGATGATCACCCCTAACGTTTACGCAGACTCCATTGAATGGATGCACCG CAATGTAAACCGTCGTGATTCCATTATCCTGTCCCTGCACCCGCACAATGACCGTGGCACCGGCGTTGGCGCAGCTGAAC TGGGCTACATGGCTGGCGCTGACCGCATCGAAGGCTGCCTGTTCGGCAACGGCGAGCGCACCGGCAACGTCTGCCTGGTC ACCCTGGCACTGAACATGCTGACCCAGGGCGTTGACCCTCAGCTGGACTTCACCGATATACGCCAGATCCGCAGCACCGT TGAATACTGCAACCAGCTGCGCGTTCCTGAGCGCCACCCTTACGCCGGCGACCTGGTCTTCACCGCGTTCTCCGGCTCCC ACCAGGATGCTGTTAACAAGGGTCTGGATGCGATGGCTGCCAAGGTCAAGCCAGGCGCGAACTCCACGGATGTGTCGTGG GAGGAGCTGCGCGACACCGAATGGGAGGTTCCTTACCTGCCTATCGATCCAAAGGATGTCGGCCGCGACTACGAGGCCGT TATTCGCGTGAACTCCCAGTCCGGCAAGGGCGGCGTTGCCTACATCATGAAGACCGATCATGGCCTGCAGATCCCTCGCT CCATGCAGGTTGAGTTCTCCGCCGTTGTCCAGAACGTCACCGACGCTGAGGGCGGCGAGGTCAACTCCAAGGCAATGTGG GATATCTTCGCCACCGAGTACCTGGAGCGCACCGCACCAGTTGAGCAGATCGCGCTGCGCGTCGAGAACGCTCAGACCGA AAACGAGGATGCATCCATCACCGCCGAGCTCATCCACAACGGCAAGGACGTCACCGTCGATGGCCACGGCAACGGCCCAC TGGCCGCTTACGCCAACGCGCTGGAGAAGCTGGGCATCGACGTTGAGATCCAGGAATACAACCAGCACGCCCGCACCTCG GGCGACGATGCAGAAGCAGCCGCCTACGTCCTGGCTGAGGTCAACGGCCGCAAGGTCTGGGGCGTCGGCATCGCTGGCTC CATCACCTACGCTTCGCTGAAGGCAGTGACCTCCGCCGTAAACCGCGCGCTGGACGTCAACCACGAGGCAGTCCTGGCTG GCGGCGTTTAA
Upstream 100 bases:
>100_bases CGGCGGGTCCCAGAGGTCTTAACACGACCGGCATCCCGTCGCGGAGTTTGGTGTTGCCGGTCGTGGACCCACCCAAAACT TTTTAAGAAGGTTGAACACA
Downstream 100 bases:
>100_bases GCTTTACGACGTCTCCCTCTAGGCCCTACAAGCCGGTGGCAAAATTTTCACGTTGTTGAAAATTCTTGCCACCGGCTTCG TGTGTGATAGGCATTTAGAG
Product: 2-isopropylmalate synthase
Products: NA
Alternate protein names: Alpha-IPM synthase; Alpha-isopropylmalate synthase
Number of amino acids: Translated: 616; Mature: 615
Protein sequence:
>616_residues MSPNDAFISAPAKIETPVGPRNEGQPAWNKQRGSSMPVNRYMPFEVEVEDISLPDRTWPDKKITVAPQWCAVDLRDGNQA LIDPMSPERKRRMFELLVQMGFKEIEVGFPSASQTDFDFVREIIEKDMIPDDVTIQVLVQAREHLIRRTFEACEGAKNVI VHFYNSTSILQRNVVFRMDKDQVKKLATDAAELIKTIAQDYPDTNWRWQYSPESFTGTEVEYAKEVVDAVVEVMDPTPEN PMIINLPSTVEMITPNVYADSIEWMHRNVNRRDSIILSLHPHNDRGTGVGAAELGYMAGADRIEGCLFGNGERTGNVCLV TLALNMLTQGVDPQLDFTDIRQIRSTVEYCNQLRVPERHPYAGDLVFTAFSGSHQDAVNKGLDAMAAKVKPGANSTDVSW EELRDTEWEVPYLPIDPKDVGRDYEAVIRVNSQSGKGGVAYIMKTDHGLQIPRSMQVEFSAVVQNVTDAEGGEVNSKAMW DIFATEYLERTAPVEQIALRVENAQTENEDASITAELIHNGKDVTVDGHGNGPLAAYANALEKLGIDVEIQEYNQHARTS GDDAEAAAYVLAEVNGRKVWGVGIAGSITYASLKAVTSAVNRALDVNHEAVLAGGV
Sequences:
>Translated_616_residues MSPNDAFISAPAKIETPVGPRNEGQPAWNKQRGSSMPVNRYMPFEVEVEDISLPDRTWPDKKITVAPQWCAVDLRDGNQA LIDPMSPERKRRMFELLVQMGFKEIEVGFPSASQTDFDFVREIIEKDMIPDDVTIQVLVQAREHLIRRTFEACEGAKNVI VHFYNSTSILQRNVVFRMDKDQVKKLATDAAELIKTIAQDYPDTNWRWQYSPESFTGTEVEYAKEVVDAVVEVMDPTPEN PMIINLPSTVEMITPNVYADSIEWMHRNVNRRDSIILSLHPHNDRGTGVGAAELGYMAGADRIEGCLFGNGERTGNVCLV TLALNMLTQGVDPQLDFTDIRQIRSTVEYCNQLRVPERHPYAGDLVFTAFSGSHQDAVNKGLDAMAAKVKPGANSTDVSW EELRDTEWEVPYLPIDPKDVGRDYEAVIRVNSQSGKGGVAYIMKTDHGLQIPRSMQVEFSAVVQNVTDAEGGEVNSKAMW DIFATEYLERTAPVEQIALRVENAQTENEDASITAELIHNGKDVTVDGHGNGPLAAYANALEKLGIDVEIQEYNQHARTS GDDAEAAAYVLAEVNGRKVWGVGIAGSITYASLKAVTSAVNRALDVNHEAVLAGGV >Mature_615_residues SPNDAFISAPAKIETPVGPRNEGQPAWNKQRGSSMPVNRYMPFEVEVEDISLPDRTWPDKKITVAPQWCAVDLRDGNQAL IDPMSPERKRRMFELLVQMGFKEIEVGFPSASQTDFDFVREIIEKDMIPDDVTIQVLVQAREHLIRRTFEACEGAKNVIV HFYNSTSILQRNVVFRMDKDQVKKLATDAAELIKTIAQDYPDTNWRWQYSPESFTGTEVEYAKEVVDAVVEVMDPTPENP MIINLPSTVEMITPNVYADSIEWMHRNVNRRDSIILSLHPHNDRGTGVGAAELGYMAGADRIEGCLFGNGERTGNVCLVT LALNMLTQGVDPQLDFTDIRQIRSTVEYCNQLRVPERHPYAGDLVFTAFSGSHQDAVNKGLDAMAAKVKPGANSTDVSWE ELRDTEWEVPYLPIDPKDVGRDYEAVIRVNSQSGKGGVAYIMKTDHGLQIPRSMQVEFSAVVQNVTDAEGGEVNSKAMWD IFATEYLERTAPVEQIALRVENAQTENEDASITAELIHNGKDVTVDGHGNGPLAAYANALEKLGIDVEIQEYNQHARTSG DDAEAAAYVLAEVNGRKVWGVGIAGSITYASLKAVTSAVNRALDVNHEAVLAGGV
Specific function: Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
COG id: COG0119
COG function: function code E; Isopropylmalate/homocitrate/citramalate synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily
Homologues:
Organism=Escherichia coli, GI1786261, Length=546, Percent_Identity=25.8241758241758, Blast_Score=126, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6324225, Length=578, Percent_Identity=46.1937716262976, Blast_Score=530, Evalue=1e-151, Organism=Saccharomyces cerevisiae, GI6324682, Length=558, Percent_Identity=46.7741935483871, Blast_Score=524, Evalue=1e-149,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): LEU1_CORGB (A4QAP0)
Other databases:
- EMBL: AP009044 - RefSeq: YP_001137189.1 - ProteinModelPortal: A4QAP0 - SMR: A4QAP0 - STRING: A4QAP0 - GeneID: 4991673 - GenomeReviews: AP009044_GR - KEGG: cgt:cgR_0323 - eggNOG: COG0119 - HOGENOM: HBG289752 - OMA: APRWCAV - ProtClustDB: PRK03739 - HAMAP: MF_00572 - InterPro: IPR013709 - InterPro: IPR002034 - InterPro: IPR013785 - InterPro: IPR005668 - InterPro: IPR000891 - Gene3D: G3DSA:3.20.20.70 - PANTHER: PTHR10277:SF2 - SMART: SM00917 - TIGRFAMs: TIGR00970
Pfam domain/function: PF00682 HMGL-like; PF08502 LeuA_dimer; SSF110921 2-isopropylmalate_synth_dimer
EC number: =2.3.3.13
Molecular weight: Translated: 68227; Mature: 68096
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00815 AIPM_HOMOCIT_SYNTH_1; PS00816 AIPM_HOMOCIT_SYNTH_2; PS50991 PYR_CT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPNDAFISAPAKIETPVGPRNEGQPAWNKQRGSSMPVNRYMPFEVEVEDISLPDRTWPD CCCCCCEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC KKITVAPQWCAVDLRDGNQALIDPMSPERKRRMFELLVQMGFKEIEVGFPSASQTDFDFV CEEEECCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHH REIIEKDMIPDDVTIQVLVQAREHLIRRTFEACEGAKNVIVHFYNSTSILQRNVVFRMDK HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHCCEEEEECH DQVKKLATDAAELIKTIAQDYPDTNWRWQYSPESFTGTEVEYAKEVVDAVVEVMDPTPEN HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCC PMIINLPSTVEMITPNVYADSIEWMHRNVNRRDSIILSLHPHNDRGTGVGAAELGYMAGA CEEEECCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCC DRIEGCLFGNGERTGNVCLVTLALNMLTQGVDPQLDFTDIRQIRSTVEYCNQLRVPERHP HHHCEEEECCCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC YAGDLVFTAFSGSHQDAVNKGLDAMAAKVKPGANSTDVSWEELRDTEWEVPYLPIDPKDV CCCCEEEEEECCCCHHHHHHCHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHH GRDYEAVIRVNSQSGKGGVAYIMKTDHGLQIPRSMQVEFSAVVQNVTDAEGGEVNSKAMW CCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH DIFATEYLERTAPVEQIALRVENAQTENEDASITAELIHNGKDVTVDGHGNGPLAAYANA HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEHHHHHCCCEEEEECCCCCCHHHHHHH LEKLGIDVEIQEYNQHARTSGDDAEAAAYVLAEVNGRKVWGVGIAGSITYASLKAVTSAV HHHCCCCEEEHHHHHHHCCCCCCHHHHEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHH NRALDVNHEAVLAGGV HHHHCCCCCEEEECCC >Mature Secondary Structure SPNDAFISAPAKIETPVGPRNEGQPAWNKQRGSSMPVNRYMPFEVEVEDISLPDRTWPD CCCCCEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC KKITVAPQWCAVDLRDGNQALIDPMSPERKRRMFELLVQMGFKEIEVGFPSASQTDFDFV CEEEECCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHH REIIEKDMIPDDVTIQVLVQAREHLIRRTFEACEGAKNVIVHFYNSTSILQRNVVFRMDK HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHCCEEEEECH DQVKKLATDAAELIKTIAQDYPDTNWRWQYSPESFTGTEVEYAKEVVDAVVEVMDPTPEN HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCC PMIINLPSTVEMITPNVYADSIEWMHRNVNRRDSIILSLHPHNDRGTGVGAAELGYMAGA CEEEECCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCC DRIEGCLFGNGERTGNVCLVTLALNMLTQGVDPQLDFTDIRQIRSTVEYCNQLRVPERHP HHHCEEEECCCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC YAGDLVFTAFSGSHQDAVNKGLDAMAAKVKPGANSTDVSWEELRDTEWEVPYLPIDPKDV CCCCEEEEEECCCCHHHHHHCHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHH GRDYEAVIRVNSQSGKGGVAYIMKTDHGLQIPRSMQVEFSAVVQNVTDAEGGEVNSKAMW CCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH DIFATEYLERTAPVEQIALRVENAQTENEDASITAELIHNGKDVTVDGHGNGPLAAYANA HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEHHHHHCCCEEEEECCCCCCHHHHHHH LEKLGIDVEIQEYNQHARTSGDDAEAAAYVLAEVNGRKVWGVGIAGSITYASLKAVTSAV HHHCCCCEEEHHHHHHHCCCCCCHHHHEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHH NRALDVNHEAVLAGGV HHHHCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA