| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145294366
Identifier: 145294366
GI number: 145294366
Start: 354593
End: 355864
Strand: Reverse
Name: 145294366
Synonym: cgR_0321
Alternate gene names: NA
Gene position: 355864-354593 (Counterclockwise)
Preceding gene: 145294367
Following gene: 145294365
Centisome position: 10.74
GC content: 61.08
Gene sequence:
>1272_bases ATGAAGCTTTCACTGCCTGCACCCCTACGCCGTTTGCGCAGCACTGCCGCCATCGTCTCAGCAAAAGTTGCGACATCCGC GTCCAAGGCGACCGGTCGCGGATCCGGTGGCATGATCGGCGGACTGGTGGCCAGCAAGGTAGACCCGGACATCATGTCCA ACCTCATCAACAACCGCCCAACAGTGCTGGTCACGGGCACAAATGGCAAGTCCACCACCACCCGTATGCTGGCCGCCGCG ATGCGCAGCACTTACACCGTCGCCACCAATGAAGGCGGCGACAACATGGACGCCGGCATCATTTCTGCGCTGCTCGCAGG CCGAAACGCCTCACACGTGGTCTTGGAAGTCGATGAGCTGCACGTACCCGCCGCCATCGAACGCCTCAAGCCCGACGCCC TCGTGCTGCTCAACCTTTCCCGCGACCAGCTCGACCGCGTTGGCGAAATTAACAAAATCGAACGTGTCCTCCGCGACGCC GTCCGCTCCCGCCCCGAAATGACCGTCATCGCCAACTGCGACGACGTGCTTGTCACTTCCGTGGCCTTCGACGCCGAAAA CGTCATCTGGGTCGGCGCTGGCACCGGCTGGCAAGGCGAATCAGTCACCTGCCCACGCACCGAATCCCGCATCCTCCACG ACGGACGTCACTGGAGCGCCGAGAAGACGCTTCTCGACGGCCGCACCTTCGCACGTCCCACCCCCTCATGGGAGGTTGAC GGTGATACCATCCATTCACCATCCGGCGATCTCACCTTGGATCTCAACCTCCCAGGTCAGGCCAACCGTGGCAACGCGGC ACAAGCAATCGCAGCCTCCACCGTATTTAATGTGCCCGTTTCCTCCGCACTGCCCGCAGTCAACTCCGTCAACAACGTTG CTGGACGCTATTCCACCATCACTGTCGGTGAACACAAGGTCCACCTCCTGCTCGCCAAAAACCCAGCAGGCTGGCAAGAA GCCCTTTCCATGGTTGATCGCACAGCTGATGGCTTAGTCATCGTCGTCAATGGCCAGGTTGCCGACGGCGAAGACCTCTC CTGGCTTTGGGACGTCCGCTTCGAAGACTTCGAAAACCTCTCCGTTAAAGCCTCCGGCGAGCGCGGCACCGACCTGGCAG TCCGCCTCACCTACGCCGAAATCAACCACGAACTCATCTCCAACCCCGTCGACGCCATCGCAGCCTGCCCTCCCGGCCGC ATCGAAGTCCTCGCCAACTACACCGCATTCCGAGACCTCAAGAAGGCTCTGGAGAAAGGGACCGAACAATAA
Upstream 100 bases:
>100_bases CCGATGTTGCCTTCTTAGCAGCTGTTAAAAGGGTAAAAGAAGGGAAGAAAGTGGACGTCGAAAAGCACTAAAGGCTTCTG CTTAACTAGACTCGTTTTTC
Downstream 100 bases:
>100_bases TGACCACCCTCAACATCGGCCTCATCCTCCCCGACGTCCTCGGAACTTACGGCGACGACGGCAACGCGTTAGTCCTGCGC CAACGCGCACGCATGCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Mur Ligase Family Protein; UDP-N-Acetylmuramyl Tripeptide Synthetase; Ligase; Mur Ligase; UDP-N-Acetylmuramoylalanine-D-Glutamate Ligase; Mur Ligase Middle Domain Protein; Conserved Domain Protein; UDP-N-Acetylmuramyl Tripeptide Synthase-Like Protein; UDP-N-Acetylmuramyl Tripeptide Synthetase MurC; UDP-N-Acetylmuramyl Tripeptide Synthetase Like; Murein Ligase; UDP-N-Acetylmuramoyl-L-Alanyl-D-Glutamate-Lysine Ligase; Udp-N-Acetylmuramyl Tripeptide Synthetase; Cell Wall Biosynthesis Protein Mur Ligase Family; Mur Ligase Middle Domain-Containing Protein; UDP-N-Acetylmuramyl Peptide Synthetase
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MKLSLPAPLRRLRSTAAIVSAKVATSASKATGRGSGGMIGGLVASKVDPDIMSNLINNRPTVLVTGTNGKSTTTRMLAAA MRSTYTVATNEGGDNMDAGIISALLAGRNASHVVLEVDELHVPAAIERLKPDALVLLNLSRDQLDRVGEINKIERVLRDA VRSRPEMTVIANCDDVLVTSVAFDAENVIWVGAGTGWQGESVTCPRTESRILHDGRHWSAEKTLLDGRTFARPTPSWEVD GDTIHSPSGDLTLDLNLPGQANRGNAAQAIAASTVFNVPVSSALPAVNSVNNVAGRYSTITVGEHKVHLLLAKNPAGWQE ALSMVDRTADGLVIVVNGQVADGEDLSWLWDVRFEDFENLSVKASGERGTDLAVRLTYAEINHELISNPVDAIAACPPGR IEVLANYTAFRDLKKALEKGTEQ
Sequences:
>Translated_423_residues MKLSLPAPLRRLRSTAAIVSAKVATSASKATGRGSGGMIGGLVASKVDPDIMSNLINNRPTVLVTGTNGKSTTTRMLAAA MRSTYTVATNEGGDNMDAGIISALLAGRNASHVVLEVDELHVPAAIERLKPDALVLLNLSRDQLDRVGEINKIERVLRDA VRSRPEMTVIANCDDVLVTSVAFDAENVIWVGAGTGWQGESVTCPRTESRILHDGRHWSAEKTLLDGRTFARPTPSWEVD GDTIHSPSGDLTLDLNLPGQANRGNAAQAIAASTVFNVPVSSALPAVNSVNNVAGRYSTITVGEHKVHLLLAKNPAGWQE ALSMVDRTADGLVIVVNGQVADGEDLSWLWDVRFEDFENLSVKASGERGTDLAVRLTYAEINHELISNPVDAIAACPPGR IEVLANYTAFRDLKKALEKGTEQ >Mature_423_residues MKLSLPAPLRRLRSTAAIVSAKVATSASKATGRGSGGMIGGLVASKVDPDIMSNLINNRPTVLVTGTNGKSTTTRMLAAA MRSTYTVATNEGGDNMDAGIISALLAGRNASHVVLEVDELHVPAAIERLKPDALVLLNLSRDQLDRVGEINKIERVLRDA VRSRPEMTVIANCDDVLVTSVAFDAENVIWVGAGTGWQGESVTCPRTESRILHDGRHWSAEKTLLDGRTFARPTPSWEVD GDTIHSPSGDLTLDLNLPGQANRGNAAQAIAASTVFNVPVSSALPAVNSVNNVAGRYSTITVGEHKVHLLLAKNPAGWQE ALSMVDRTADGLVIVVNGQVADGEDLSWLWDVRFEDFENLSVKASGERGTDLAVRLTYAEINHELISNPVDAIAACPPGR IEVLANYTAFRDLKKALEKGTEQ
Specific function: Unknown
COG id: COG0769
COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45121; Mature: 45121
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSLPAPLRRLRSTAAIVSAKVATSASKATGRGSGGMIGGLVASKVDPDIMSNLINNRP CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHCCCHHHHHHHHCCCC TVLVTGTNGKSTTTRMLAAAMRSTYTVATNEGGDNMDAGIISALLAGRNASHVVLEVDEL EEEEECCCCCCHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCC HVPAAIERLKPDALVLLNLSRDQLDRVGEINKIERVLRDAVRSRPEMTVIANCDDVLVTS CCCHHHHHCCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEE VAFDAENVIWVGAGTGWQGESVTCPRTESRILHDGRHWSAEKTLLDGRTFARPTPSWEVD EEECCCCEEEEECCCCCCCCCEECCCCHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCC GDTIHSPSGDLTLDLNLPGQANRGNAAQAIAASTVFNVPVSSALPAVNSVNNVAGRYSTI CCEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHEECCCHHHHCCCHHHHHHHCCCEEEE TVGEHKVHLLLAKNPAGWQEALSMVDRTADGLVIVVNGQVADGEDLSWLWDVRFEDFENL EECCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCC SVKASGERGTDLAVRLTYAEINHELISNPVDAIAACPPGRIEVLANYTAFRDLKKALEKG EEEECCCCCCCEEEEEEHHHHHHHHHCCCHHHHHCCCCCCEEEEECHHHHHHHHHHHHCC TEQ CCC >Mature Secondary Structure MKLSLPAPLRRLRSTAAIVSAKVATSASKATGRGSGGMIGGLVASKVDPDIMSNLINNRP CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHCCCHHHHHHHHCCCC TVLVTGTNGKSTTTRMLAAAMRSTYTVATNEGGDNMDAGIISALLAGRNASHVVLEVDEL EEEEECCCCCCHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCC HVPAAIERLKPDALVLLNLSRDQLDRVGEINKIERVLRDAVRSRPEMTVIANCDDVLVTS CCCHHHHHCCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEE VAFDAENVIWVGAGTGWQGESVTCPRTESRILHDGRHWSAEKTLLDGRTFARPTPSWEVD EEECCCCEEEEECCCCCCCCCEECCCCHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCC GDTIHSPSGDLTLDLNLPGQANRGNAAQAIAASTVFNVPVSSALPAVNSVNNVAGRYSTI CCEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHEECCCHHHHCCCHHHHHHHCCCEEEE TVGEHKVHLLLAKNPAGWQEALSMVDRTADGLVIVVNGQVADGEDLSWLWDVRFEDFENL EECCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCC SVKASGERGTDLAVRLTYAEINHELISNPVDAIAACPPGRIEVLANYTAFRDLKKALEKG EEEECCCCCCCEEEEEEHHHHHHHHHCCCHHHHHCCCCCCEEEEECHHHHHHHHHHHHCC TEQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA