| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is 145294241
Identifier: 145294241
GI number: 145294241
Start: 214022
End: 215167
Strand: Reverse
Name: 145294241
Synonym: cgR_0197
Alternate gene names: NA
Gene position: 215167-214022 (Counterclockwise)
Preceding gene: 145294242
Following gene: 145294238
Centisome position: 6.49
GC content: 55.85
Gene sequence:
>1146_bases ATGCCCAATCAGGCCCACTTCTCTGCGTCCTTTGCCCGCCCCTCTACCCCGGCTGCAAAGTGCATGCACCATATCCGCCT CGGCCAGCAACTCATTAGAAATGAGCTGGTCGAGGCCACAGGTCTGTCCCAACCGACTGTCACCCGCGCAGTCACCGCTT TAATGCAGGCAGGTTTGGTTCGTGAACGCCCTGATCTCACACTCTCATCGGGCCCTGGTCGTCCCAATATTCCTCTAGAA CTCGCTCCAAGTCCATGGATTCATGCAGGCGTGGCAATCGGCACCAAGTCTTCCTACGTCGCTTTGTTTGATACCAAGGG TCGCACCCTTCGTGATGCCATGCTGGAAATCTCAGCAGCTGATTTAGATCCAGACACTTTCATCGAACACCTCATTGCTG GTGTCAACCGCCTCACCACTGGCCTTGATCTACCGCTGGTAGGTATTGGTGTGGCAACCTCAGGAAAAGTCACCAACGCG GGCGTTGTCACCGCAAGTAACTTGGGTTGGGATGGCGTTGATATCGCCGGCCGCCTGAACTACCAATTCAGTGTGCCTGC AACCGTGGCATCCGCAATTCCTGCCATCGCAGCTTCTGAACTGCAGGCTTCCCCACTTCCCCACCCTGAGCAGCCAACTC CCATCACCTTGACCTTCTACGCCGATGACTCTGTGGGCGCGGCCTACAGCAATGATTTGGGAGTACACGTCATTGGACCA CTGGCTACCACTCGCGGATCAGGTTTGGACACTTTGGGCATGGCTGCCGAAGATGCGCTGAGCACCCAAGGTTTCTTAAG CAGGGTTTCTGATCAGGGTATCTTTGCCAACAGCCTTGGTGAGCTAGTCACCATTGCTAAAGACAATGAAACCGCACGCG CGTTCCTCAACGATCGCGCTACCCTGCTGGCTCACACCGCTGCAGAAGCTGCCGAAACAGTTAAGCCATCCACCTTGGTG CTCTCAGGATCGGCGTTTTCGGAAGACCCACAAGGTAGGTCGGTGTTCGCTTCCCAGTTGAAGAAGGAATACGACGCAGA CATTGAACTCCGCTTGATCCCCACCCACAGGGAAAACGTCCGCGCAGCGGCTCGAGCAGTCGCACTTGATCGACTACTCA ACGAGCCACTTACCCTCGTACCCTAA
Upstream 100 bases:
>100_bases CGGCATCTAACTACTTATCCATGCCCATTTACAGACAATGCGGTCTAGATAACAAGACCCCTATTAGACAGCGTTGTCTA TGATTGGCTATGGTTTACCT
Downstream 100 bases:
>100_bases CCTCATCTAAGCTCAGCGCTTCCGCGATGGAAGCCTGGGCTTTTGATGTTTCTACATAGCGGCCCGCGTGGGGGATAAAT GACTGGGACTGGGCGTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MPNQAHFSASFARPSTPAAKCMHHIRLGQQLIRNELVEATGLSQPTVTRAVTALMQAGLVRERPDLTLSSGPGRPNIPLE LAPSPWIHAGVAIGTKSSYVALFDTKGRTLRDAMLEISAADLDPDTFIEHLIAGVNRLTTGLDLPLVGIGVATSGKVTNA GVVTASNLGWDGVDIAGRLNYQFSVPATVASAIPAIAASELQASPLPHPEQPTPITLTFYADDSVGAAYSNDLGVHVIGP LATTRGSGLDTLGMAAEDALSTQGFLSRVSDQGIFANSLGELVTIAKDNETARAFLNDRATLLAHTAAEAAETVKPSTLV LSGSAFSEDPQGRSVFASQLKKEYDADIELRLIPTHRENVRAAARAVALDRLLNEPLTLVP
Sequences:
>Translated_381_residues MPNQAHFSASFARPSTPAAKCMHHIRLGQQLIRNELVEATGLSQPTVTRAVTALMQAGLVRERPDLTLSSGPGRPNIPLE LAPSPWIHAGVAIGTKSSYVALFDTKGRTLRDAMLEISAADLDPDTFIEHLIAGVNRLTTGLDLPLVGIGVATSGKVTNA GVVTASNLGWDGVDIAGRLNYQFSVPATVASAIPAIAASELQASPLPHPEQPTPITLTFYADDSVGAAYSNDLGVHVIGP LATTRGSGLDTLGMAAEDALSTQGFLSRVSDQGIFANSLGELVTIAKDNETARAFLNDRATLLAHTAAEAAETVKPSTLV LSGSAFSEDPQGRSVFASQLKKEYDADIELRLIPTHRENVRAAARAVALDRLLNEPLTLVP >Mature_380_residues PNQAHFSASFARPSTPAAKCMHHIRLGQQLIRNELVEATGLSQPTVTRAVTALMQAGLVRERPDLTLSSGPGRPNIPLEL APSPWIHAGVAIGTKSSYVALFDTKGRTLRDAMLEISAADLDPDTFIEHLIAGVNRLTTGLDLPLVGIGVATSGKVTNAG VVTASNLGWDGVDIAGRLNYQFSVPATVASAIPAIAASELQASPLPHPEQPTPITLTFYADDSVGAAYSNDLGVHVIGPL ATTRGSGLDTLGMAAEDALSTQGFLSRVSDQGIFANSLGELVTIAKDNETARAFLNDRATLLAHTAAEAAETVKPSTLVL SGSAFSEDPQGRSVFASQLKKEYDADIELRLIPTHRENVRAAARAVALDRLLNEPLTLVP
Specific function: Unknown
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: NA
Molecular weight: Translated: 40045; Mature: 39914
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNQAHFSASFARPSTPAAKCMHHIRLGQQLIRNELVEATGLSQPTVTRAVTALMQAGLV CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC RERPDLTLSSGPGRPNIPLELAPSPWIHAGVAIGTKSSYVALFDTKGRTLRDAMLEISAA CCCCCCEEECCCCCCCCCEEECCCCCEECCEEECCCCCEEEEEECCCCHHHHHHHHHHCC DLDPDTFIEHLIAGVNRLTTGLDLPLVGIGVATSGKVTNAGVVTASNLGWDGVDIAGRLN CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCEEEEEEE YQFSVPATVASAIPAIAASELQASPLPHPEQPTPITLTFYADDSVGAAYSNDLGVHVIGP EEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECC LATTRGSGLDTLGMAAEDALSTQGFLSRVSDQGIFANSLGELVTIAKDNETARAFLNDRA CCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCHHCCCCEEEEECCCHHHHHHHCCCH TLLAHTAAEAAETVKPSTLVLSGSAFSEDPQGRSVFASQLKKEYDADIELRLIPTHRENV HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHH RAAARAVALDRLLNEPLTLVP HHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PNQAHFSASFARPSTPAAKCMHHIRLGQQLIRNELVEATGLSQPTVTRAVTALMQAGLV CCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC RERPDLTLSSGPGRPNIPLELAPSPWIHAGVAIGTKSSYVALFDTKGRTLRDAMLEISAA CCCCCCEEECCCCCCCCCEEECCCCCEECCEEECCCCCEEEEEECCCCHHHHHHHHHHCC DLDPDTFIEHLIAGVNRLTTGLDLPLVGIGVATSGKVTNAGVVTASNLGWDGVDIAGRLN CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCEEEEEEE YQFSVPATVASAIPAIAASELQASPLPHPEQPTPITLTFYADDSVGAAYSNDLGVHVIGP EEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECC LATTRGSGLDTLGMAAEDALSTQGFLSRVSDQGIFANSLGELVTIAKDNETARAFLNDRA CCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCHHCCCCEEEEECCCHHHHHHHCCCH TLLAHTAAEAAETVKPSTLVLSGSAFSEDPQGRSVFASQLKKEYDADIELRLIPTHRENV HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHH RAAARAVALDRLLNEPLTLVP HHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]