| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is 145294152
Identifier: 145294152
GI number: 145294152
Start: 124535
End: 125689
Strand: Reverse
Name: 145294152
Synonym: cgR_0110
Alternate gene names: NA
Gene position: 125689-124535 (Counterclockwise)
Preceding gene: 145294153
Following gene: 145294144
Centisome position: 3.79
GC content: 59.05
Gene sequence:
>1155_bases ATGAGATCAGGAAACGCCAATCGCGTCTTCATAGGTGTTACCCTCCTGCTGTTTACTGCAGGATGGGCAGCCAATCATTT CGCGTCAGTGTTGGTGTTGATCCGTGAACAATTAGACGTATCAAGCGTGCTGGTCAACGGCGCTTTTGGTATTTATGCAC TGGGACTTCTTCCAAGTTTGCTCGCAGGCGGTGTGCTTGCCGACCGTTTTGGTGCCCGCATGGTGGTACTCACCGGAGGT GTACTTTCTGCGCTTGGAAACCTCTCCCTCCTGGCATTTCATGATGGCCCCTCCCTCCTGGTGGGACGATTCATCGTTGG TCTGGGCGTGGGATTAGTCGTCAGCGCGGGCACCGCATGGGCGGGCAGATTGCGCGGAGCAAGCGGCGTGACATTGGCCG GCATTATTCTGACCGCCGGTTTCATGATGGGGCCGATTGTGACAAGTGGGTTGGGGATGGCGTCGACAAGCATTATTACG CCCTTTGCCATAAGCGTTGCCCTCTCGCTGATCGCGGTGGTTGTGGGATTTGCGCTTGGCGATGCCCGCAGCACCCCGAG CGCACTTGGCGCATCCAGCGGAATCAAACACGAACGAAGCATGAAAAAGGCCCTCGCGGTGTCCTTGCCGATGGCAATTT GGGTGTTCAGCTGCATCACCACCTCCCTGATCGTGATGTCCGCGCGCATCGACGCCACCTTCGGCAACGCGATCCTCCTC CCCGGGATCGGCGCGGCGATCGCCTTCAGCGCCGGCCTGATCGCACAATTTTTAGGTAGGAAATTCGCATGGGGTCGTGG CTCCGGAATCGTGGGCGCGCTGTGTGCCCTCGCGGGTTTCGCGCTGGCAGCTTTTGGTGGCGACTCCATTCCAGTGTGGC TTTTCGTCATCGCATCGATCCTGCTCGGCACCGCATATGGCCTCTGCCTGCGCGAAGGGCTCCTCGGCATCGAAACTTAC ACACCACTCAACCGACGTGGCACCGGCATCGGCATCTATTATGTGTTCACGTATTTGGGATTCGGGCTGCCAGTGCTTCT CGACGTCCTCCTCCCGCACCTTGGCGCCTCCATTCCGCTGTACGCGCTGGCGGCGCTCGCCCTTGGCTCCGCAGTAATCC GCGGCGTACAAATCAAGCGCGGGTATGTGGTTTAG
Upstream 100 bases:
>100_bases ACACTCCTTTGGTCACCTGGTTTGGTTGAGGGAAACAGACCGCCCAAGAACCCAAGAAATCCCAAGAAAACATGCTGCTT ATGAATTAAAGTGAGCACCC
Downstream 100 bases:
>100_bases GTTCTAGTACTTCCGCAGATTCACCGGTTCCTGCCCGCGCCATCGCCCACGCAACAGCGACGCAATGTGTTCGTGCAGGT TAATCAACTCCTCAGTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Drug Resistance Efflux Protein
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MRSGNANRVFIGVTLLLFTAGWAANHFASVLVLIREQLDVSSVLVNGAFGIYALGLLPSLLAGGVLADRFGARMVVLTGG VLSALGNLSLLAFHDGPSLLVGRFIVGLGVGLVVSAGTAWAGRLRGASGVTLAGIILTAGFMMGPIVTSGLGMASTSIIT PFAISVALSLIAVVVGFALGDARSTPSALGASSGIKHERSMKKALAVSLPMAIWVFSCITTSLIVMSARIDATFGNAILL PGIGAAIAFSAGLIAQFLGRKFAWGRGSGIVGALCALAGFALAAFGGDSIPVWLFVIASILLGTAYGLCLREGLLGIETY TPLNRRGTGIGIYYVFTYLGFGLPVLLDVLLPHLGASIPLYALAALALGSAVIRGVQIKRGYVV
Sequences:
>Translated_384_residues MRSGNANRVFIGVTLLLFTAGWAANHFASVLVLIREQLDVSSVLVNGAFGIYALGLLPSLLAGGVLADRFGARMVVLTGG VLSALGNLSLLAFHDGPSLLVGRFIVGLGVGLVVSAGTAWAGRLRGASGVTLAGIILTAGFMMGPIVTSGLGMASTSIIT PFAISVALSLIAVVVGFALGDARSTPSALGASSGIKHERSMKKALAVSLPMAIWVFSCITTSLIVMSARIDATFGNAILL PGIGAAIAFSAGLIAQFLGRKFAWGRGSGIVGALCALAGFALAAFGGDSIPVWLFVIASILLGTAYGLCLREGLLGIETY TPLNRRGTGIGIYYVFTYLGFGLPVLLDVLLPHLGASIPLYALAALALGSAVIRGVQIKRGYVV >Mature_384_residues MRSGNANRVFIGVTLLLFTAGWAANHFASVLVLIREQLDVSSVLVNGAFGIYALGLLPSLLAGGVLADRFGARMVVLTGG VLSALGNLSLLAFHDGPSLLVGRFIVGLGVGLVVSAGTAWAGRLRGASGVTLAGIILTAGFMMGPIVTSGLGMASTSIIT PFAISVALSLIAVVVGFALGDARSTPSALGASSGIKHERSMKKALAVSLPMAIWVFSCITTSLIVMSARIDATFGNAILL PGIGAAIAFSAGLIAQFLGRKFAWGRGSGIVGALCALAGFALAAFGGDSIPVWLFVIASILLGTAYGLCLREGLLGIETY TPLNRRGTGIGIYYVFTYLGFGLPVLLDVLLPHLGASIPLYALAALALGSAVIRGVQIKRGYVV
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39149; Mature: 39149
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSGNANRVFIGVTLLLFTAGWAANHFASVLVLIREQLDVSSVLVNGAFGIYALGLLPSL CCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH LAGGVLADRFGARMVVLTGGVLSALGNLSLLAFHDGPSLLVGRFIVGLGVGLVVSAGTAW HHCCHHHHHHCCEEEEEECHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHH AGRLRGASGVTLAGIILTAGFMMGPIVTSGLGMASTSIITPFAISVALSLIAVVVGFALG HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC DARSTPSALGASSGIKHERSMKKALAVSLPMAIWVFSCITTSLIVMSARIDATFGNAILL CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE PGIGAAIAFSAGLIAQFLGRKFAWGRGSGIVGALCALAGFALAAFGGDSIPVWLFVIASI CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LLGTAYGLCLREGLLGIETYTPLNRRGTGIGIYYVFTYLGFGLPVLLDVLLPHLGASIPL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHH YALAALALGSAVIRGVQIKRGYVV HHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRSGNANRVFIGVTLLLFTAGWAANHFASVLVLIREQLDVSSVLVNGAFGIYALGLLPSL CCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH LAGGVLADRFGARMVVLTGGVLSALGNLSLLAFHDGPSLLVGRFIVGLGVGLVVSAGTAW HHCCHHHHHHCCEEEEEECHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHH AGRLRGASGVTLAGIILTAGFMMGPIVTSGLGMASTSIITPFAISVALSLIAVVVGFALG HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC DARSTPSALGASSGIKHERSMKKALAVSLPMAIWVFSCITTSLIVMSARIDATFGNAILL CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE PGIGAAIAFSAGLIAQFLGRKFAWGRGSGIVGALCALAGFALAAFGGDSIPVWLFVIASI CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LLGTAYGLCLREGLLGIETYTPLNRRGTGIGIYYVFTYLGFGLPVLLDVLLPHLGASIPL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHH YALAALALGSAVIRGVQIKRGYVV HHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA