| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is ureB [H]
Identifier: 145294146
GI number: 145294146
Start: 119678
End: 120154
Strand: Direct
Name: ureB [H]
Synonym: cgR_0104
Alternate gene names: 145294146
Gene position: 119678-120154 (Clockwise)
Preceding gene: 145294145
Following gene: 145294147
Centisome position: 3.61
GC content: 55.97
Gene sequence:
>477_bases ATGATCCCAGGCGAGTACATCCTGTCCAGCGAATCACTCACCGGAAATGTTGGGCGCGAGGCCAAAACCATCGAAATCAT CAACACCGGTGATAGGCCTGTGCAGATTGGTTCGCATTTCCACTTCGCTGAAGTAAACCCCAGCATCAGCTTTGATCGCA GTGAAGGTTACGGCTTCCGCCTTGATATCCCATCCGGCACCGCGGTGCGCCTCGAGCCAGGCGATGCCCGCACCGTCAAC CTTGTTGCCATTGGCGGTGACCGCATTGTTGCAGGTTTCCGAGATCTCGTCGATGGGCCGTTGGAGGACCTCAAAGTCAA CGTGTGGGAGGGACGCGAAGACGATTGGCGTCGTTCCTCAGCTGCTGGTGATGCTCCACAAGAATTGCCACAGGTCGAAG CTGCTGAACGTGGCCGGAAACTAGATGAGGCCACTGACGTGGGCACAGAAGATACCCCGGAAGAAGGTCAAAATTAA
Upstream 100 bases:
>100_bases TCCCTGACATCCAGGTTGAAGCAACGTTTGATGACGGCACCAAGCTCGTCACCGTGCACAATCCCATCCGATAACCCTTG ATGTTTTTAGGAGTTTTGTC
Downstream 100 bases:
>100_bases ATGAGTTTTGAAATTTCCCGCAAGCAGTACACCGACCTTTATGGTCCAACCGTTGGCGATTCAGTACGTCTTGCTGATAC TGAGCTTTTTCTCTGTGTGG
Product: urease subunit beta
Products: NA
Alternate protein names: Urea amidohydrolase subunit beta [H]
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MIPGEYILSSESLTGNVGREAKTIEIINTGDRPVQIGSHFHFAEVNPSISFDRSEGYGFRLDIPSGTAVRLEPGDARTVN LVAIGGDRIVAGFRDLVDGPLEDLKVNVWEGREDDWRRSSAAGDAPQELPQVEAAERGRKLDEATDVGTEDTPEEGQN
Sequences:
>Translated_158_residues MIPGEYILSSESLTGNVGREAKTIEIINTGDRPVQIGSHFHFAEVNPSISFDRSEGYGFRLDIPSGTAVRLEPGDARTVN LVAIGGDRIVAGFRDLVDGPLEDLKVNVWEGREDDWRRSSAAGDAPQELPQVEAAERGRKLDEATDVGTEDTPEEGQN >Mature_158_residues MIPGEYILSSESLTGNVGREAKTIEIINTGDRPVQIGSHFHFAEVNPSISFDRSEGYGFRLDIPSGTAVRLEPGDARTVN LVAIGGDRIVAGFRDLVDGPLEDLKVNVWEGREDDWRRSSAAGDAPQELPQVEAAERGRKLDEATDVGTEDTPEEGQN
Specific function: Unknown
COG id: COG0832
COG function: function code E; Urea amidohydrolase (urease) beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the urease beta subunit family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002019 [H]
Pfam domain/function: PF00699 Urease_beta [H]
EC number: =3.5.1.5 [H]
Molecular weight: Translated: 17163; Mature: 17163
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPGEYILSSESLTGNVGREAKTIEIINTGDRPVQIGSHFHFAEVNPSISFDRSEGYGFR CCCCCEEEECCCCCCCCCCCEEEEEEEECCCCEEEECCEEEEEECCCCEEEECCCCCEEE LDIPSGTAVRLEPGDARTVNLVAIGGDRIVAGFRDLVDGPLEDLKVNVWEGREDDWRRSS EECCCCCEEEECCCCCEEEEEEEECCCEEEHHHHHHHCCCCCCEEEEEECCCCCHHHHCC AAGDAPQELPQVEAAERGRKLDEATDVGTEDTPEEGQN CCCCCHHHCCCCHHHHHCCCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure MIPGEYILSSESLTGNVGREAKTIEIINTGDRPVQIGSHFHFAEVNPSISFDRSEGYGFR CCCCCEEEECCCCCCCCCCCEEEEEEEECCCCEEEECCEEEEEECCCCEEEECCCCCEEE LDIPSGTAVRLEPGDARTVNLVAIGGDRIVAGFRDLVDGPLEDLKVNVWEGREDDWRRSS EECCCCCEEEECCCCCEEEEEEEECCCEEEHHHHHHHCCCCCCEEEEEECCCCCHHHHCC AAGDAPQELPQVEAAERGRKLDEATDVGTEDTPEEGQN CCCCCHHHCCCCHHHHHCCCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11328647; 10930756; 12948626 [H]