| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is ylaK [H]
Identifier: 145294126
GI number: 145294126
Start: 95384
End: 96643
Strand: Direct
Name: ylaK [H]
Synonym: cgR_0084
Alternate gene names: 145294126
Gene position: 95384-96643 (Clockwise)
Preceding gene: 145294124
Following gene: 145294127
Centisome position: 2.88
GC content: 57.3
Gene sequence:
>1260_bases GTGTTGCTGTCTGATCCGTTGTCGTTGACACGGTTCGCGGAGCACGATGTAGTTCTGCCAATTGTTGTAATTACGGAATT AGAAGCCAAGCGTCATCACCCGGACCTTGGCTTTTTTGCTCGCCAGGCGCTTCGAATGCTGGATGAATTGCGCGAGATCC ATGGGGATTTGTCCAAGCCACTGCCAATTGGCGATGAAGGCGGACACATCCATGTTGAGCTGAATCACCAAAACGCGGAG TCCTTGCCCGTGGGATTCCGCCTTGGTAACAATGACACCCGCATCCTTGCAGTAGCCAAGAATCTGCAGGAAGAGGGCCA CAATGTGGTTCTGGTGTCGAAGGACCTGCCGATGCGGATTAAGGCGTCGGCAAGCGGAATCGCCGCACAGGAATACCGCG CTGCCCTGGCGCGCGACCGTGGATACACCGGCATGACCCACGCCAATATCACCGATGACCAGCTCAGCGAGCTCTACGAC ACCGGCGAGGTGCGCATTGAGGAGCTCGAAAAGCTGCCGGTCAACCACGGCTTCACCCTCAAATCCAACAGCGGTTCGGC GCTTGGTCGTATGAATTCTGACAAGATCATCGAGCTTGTCCCCGGCGACCAGCAGGTATTCGGTATCAGCGGGCGTAGCG CTGAGCAGCGGGTTGCCATTGATTTGCTTAACGACGACGCCGTCGGCATCGTATCCATCGGCGGCCCCGCGGGTACAGGT AAAAGCGCACTCGCACTGTGTGCCGGCCTGGAAGCTGTGATGGAGCGTCGCATTCAGCGTAAGATTATCGTGTTCCGCCC ACTCTTTGCCGTTGGCGGACAAGAACTTGGCTACCTGCCTGGCGATCAAGAAGAGAAAATGGGGCCTTGGGCGCAAGCGG TTTTTGACACCCTAAGCTCCATGGTCAGCCAAAACATCATCGATGAAGCCCTCTCCCGCGGCCTCATCGAAGTTCTCCCA CTAACCCACATCCGCGGACGCTCACTCCACGATGCTTTCGTCATCGTCGACGAGGCCCAATCCCTAGAGCGCAACGTGCT GCTCACCATGCTGTCTCGCATCGGTCAGAATTCCCGAGTTGTTCTCACCCACGACGTAGCGCAGCGCGATAACCTGCGCG TTGGCCGCTACGACGGCATCGTCTCTGTGGTGGAAGCACTCAAGGATCACGAGCTGTTTGGCCACATCACGTTGCAGCGT TCCGAGCGTTCCCGCATCGCTGAGTTGGTCACTCAAGTTTTGGATGCGCCATCCTTGTAG
Upstream 100 bases:
>100_bases AGATTTCCTTGGAAATTCTTCGCTCCAAACAGATACGGAGCACTGGGAAATGGAAGGAGGTGCGCAGGAAGTCTCTGTTA CTTATGTTTTGGACACGTCA
Downstream 100 bases:
>100_bases TGGCGATTTAAAGGCTTGGGATCGCTCAGTGACCTGTTGCCCTGGTTTGGGAAAGTTAGGGCTTCAGGAGCGATTCTAGG AGGGGTCGATTTTGTGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MLLSDPLSLTRFAEHDVVLPIVVITELEAKRHHPDLGFFARQALRMLDELREIHGDLSKPLPIGDEGGHIHVELNHQNAE SLPVGFRLGNNDTRILAVAKNLQEEGHNVVLVSKDLPMRIKASASGIAAQEYRAALARDRGYTGMTHANITDDQLSELYD TGEVRIEELEKLPVNHGFTLKSNSGSALGRMNSDKIIELVPGDQQVFGISGRSAEQRVAIDLLNDDAVGIVSIGGPAGTG KSALALCAGLEAVMERRIQRKIIVFRPLFAVGGQELGYLPGDQEEKMGPWAQAVFDTLSSMVSQNIIDEALSRGLIEVLP LTHIRGRSLHDAFVIVDEAQSLERNVLLTMLSRIGQNSRVVLTHDVAQRDNLRVGRYDGIVSVVEALKDHELFGHITLQR SERSRIAELVTQVLDAPSL
Sequences:
>Translated_419_residues MLLSDPLSLTRFAEHDVVLPIVVITELEAKRHHPDLGFFARQALRMLDELREIHGDLSKPLPIGDEGGHIHVELNHQNAE SLPVGFRLGNNDTRILAVAKNLQEEGHNVVLVSKDLPMRIKASASGIAAQEYRAALARDRGYTGMTHANITDDQLSELYD TGEVRIEELEKLPVNHGFTLKSNSGSALGRMNSDKIIELVPGDQQVFGISGRSAEQRVAIDLLNDDAVGIVSIGGPAGTG KSALALCAGLEAVMERRIQRKIIVFRPLFAVGGQELGYLPGDQEEKMGPWAQAVFDTLSSMVSQNIIDEALSRGLIEVLP LTHIRGRSLHDAFVIVDEAQSLERNVLLTMLSRIGQNSRVVLTHDVAQRDNLRVGRYDGIVSVVEALKDHELFGHITLQR SERSRIAELVTQVLDAPSL >Mature_419_residues MLLSDPLSLTRFAEHDVVLPIVVITELEAKRHHPDLGFFARQALRMLDELREIHGDLSKPLPIGDEGGHIHVELNHQNAE SLPVGFRLGNNDTRILAVAKNLQEEGHNVVLVSKDLPMRIKASASGIAAQEYRAALARDRGYTGMTHANITDDQLSELYD TGEVRIEELEKLPVNHGFTLKSNSGSALGRMNSDKIIELVPGDQQVFGISGRSAEQRVAIDLLNDDAVGIVSIGGPAGTG KSALALCAGLEAVMERRIQRKIIVFRPLFAVGGQELGYLPGDQEEKMGPWAQAVFDTLSSMVSQNIIDEALSRGLIEVLP LTHIRGRSLHDAFVIVDEAQSLERNVLLTMLSRIGQNSRVVLTHDVAQRDNLRVGRYDGIVSVVEALKDHELFGHITLQR SERSRIAELVTQVLDAPSL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=157, Percent_Identity=38.8535031847134, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI1787257, Length=186, Percent_Identity=31.7204301075269, Blast_Score=95, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 45949; Mature: 45949
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSDPLSLTRFAEHDVVLPIVVITELEAKRHHPDLGFFARQALRMLDELREIHGDLSKP CCCCCCCHHHHHCCCCEEEEEEEEEECHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC LPIGDEGGHIHVELNHQNAESLPVGFRLGNNDTRILAVAKNLQEEGHNVVLVSKDLPMRI CCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEEEHHHHHCCCEEEEEECCCCEEE KASASGIAAQEYRAALARDRGYTGMTHANITDDQLSELYDTGEVRIEELEKLPVNHGFTL ECCCCCCHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHCCCCHHHHHHHCCCCCCCEEE KSNSGSALGRMNSDKIIELVPGDQQVFGISGRSAEQRVAIDLLNDDAVGIVSIGGPAGTG ECCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCCCC KSALALCAGLEAVMERRIQRKIIVFRPLFAVGGQELGYLPGDQEEKMGPWAQAVFDTLSS HHHHHHHHHHHHHHHHHHHHHEEEEECHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHH MVSQNIIDEALSRGLIEVLPLTHIRGRSLHDAFVIVDEAQSLERNVLLTMLSRIGQNSRV HHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCEE VLTHDVAQRDNLRVGRYDGIVSVVEALKDHELFGHITLQRSERSRIAELVTQVLDAPSL EEEECCCCCCCCEECCHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLLSDPLSLTRFAEHDVVLPIVVITELEAKRHHPDLGFFARQALRMLDELREIHGDLSKP CCCCCCCHHHHHCCCCEEEEEEEEEECHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC LPIGDEGGHIHVELNHQNAESLPVGFRLGNNDTRILAVAKNLQEEGHNVVLVSKDLPMRI CCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEEEHHHHHCCCEEEEEECCCCEEE KASASGIAAQEYRAALARDRGYTGMTHANITDDQLSELYDTGEVRIEELEKLPVNHGFTL ECCCCCCHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHCCCCHHHHHHHCCCCCCCEEE KSNSGSALGRMNSDKIIELVPGDQQVFGISGRSAEQRVAIDLLNDDAVGIVSIGGPAGTG ECCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCCCC KSALALCAGLEAVMERRIQRKIIVFRPLFAVGGQELGYLPGDQEEKMGPWAQAVFDTLSS HHHHHHHHHHHHHHHHHHHHHEEEEECHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHH MVSQNIIDEALSRGLIEVLPLTHIRGRSLHDAFVIVDEAQSLERNVLLTMLSRIGQNSRV HHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCEE VLTHDVAQRDNLRVGRYDGIVSVVEALKDHELFGHITLQRSERSRIAELVTQVLDAPSL EEEECCCCCCCCEECCHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]