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The map label for this gene is troA [H]

Identifier: 145294083

GI number: 145294083

Start: 48594

End: 49550

Strand: Reverse

Name: troA [H]

Synonym: cgR_0041

Alternate gene names: 145294083

Gene position: 49550-48594 (Counterclockwise)

Preceding gene: 145294084

Following gene: 145294082

Centisome position: 1.5

GC content: 51.62

Gene sequence:

>957_bases
GTGATACTGAAAGACATTTTCAATAATGGGGAGCTCTTTGGGGCTTCCTCCGCGAAAAATTTCCGAAAACTACTAGCTGT
TCCAGCCGTTGCTGCCTCACTAGCTTTTGGTATCACCGCCTGTTCCGCTGTAGATGACACCCCTGACATTGTGGTCACCA
CCAACATCCTGGGTGATGTTGTAAGCCACATCGTGGGAGATTCCGCAGATGTCCAAGTACTCATGAAACCCAACGCAGAT
CCACATTCCTTCGGAGTCTCAGCACAAGACGCCGCTGCCATGGAACACGCCGATCTCATCGTGGCCAATGGACTAGGACT
GGAAGAGGGCCTTCAATCCAATGTGGACAATGCCAAAAACCAAGGGGTTCCCGTCTTGGAAGTCGGCGAACACATCGATG
TCATTGACTACTCCCCCGGCGTTCCAGATCCTCACTTTTGGACAGACCCGGCGCGCATGATCGTCGCCACGGAAGTTATA
GAAGCTGAACTGATCAAAGAACTCGATCCTTCCCTGACTGAATCGATCACACAATCAGCCCAGCACTACCGTGAGGAACT
TGTGGCCCTTGATGAGGAAGTCACCGAATTGCTCAGCAGCGTGGCCCCAGAAAACCGCAAGCTAGTAACCAATCACAATG
TTTTTGGTTACCTGGCCAACCGGTTTAACTACATCGTCATCGGCACCATCGTCCCAGGTGGCAGCACTTTGGCGGCGCCT
TCAGCATCTGACCTCAATGACATCTCCACCGCCATCGAAGACAACAATGTTCCCGCAATCTTCACCGATACCTCAAGCCC
ACAACGGTTAGCTGAAGTGTTGGCCAGCAACGCTGGCATTGATGTTCAAGTGGTGTCCATTTTCACGGAATCACTCACCG
ATGCAGATGGTGAAGCACCCACCTACATCAGCATGCAAAAAATCAATGCCGAGCGCATTGCAAGCACTTTGTCCTAA

Upstream 100 bases:

>100_bases
CAAGCACTGCTGCGGGAGCCACTATCACTTTGTTAAGTGCTGCGATATTTTTTGCCACCTTATTGACAAAGAGTGCCATT
AGTGGGTTAAACTTCACCGC

Downstream 100 bases:

>100_bases
GCACCGCAACGCTGCGGCACAACAACACCGCAACGCTGCGGTACTACCGCAAAACTGCCCATTTTTACTCAAAGGAGAAC
CATGAAAAACTCCAAGCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: Tromp-1 [H]

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MILKDIFNNGELFGASSAKNFRKLLAVPAVAASLAFGITACSAVDDTPDIVVTTNILGDVVSHIVGDSADVQVLMKPNAD
PHSFGVSAQDAAAMEHADLIVANGLGLEEGLQSNVDNAKNQGVPVLEVGEHIDVIDYSPGVPDPHFWTDPARMIVATEVI
EAELIKELDPSLTESITQSAQHYREELVALDEEVTELLSSVAPENRKLVTNHNVFGYLANRFNYIVIGTIVPGGSTLAAP
SASDLNDISTAIEDNNVPAIFTDTSSPQRLAEVLASNAGIDVQVVSIFTESLTDADGEAPTYISMQKINAERIASTLS

Sequences:

>Translated_318_residues
MILKDIFNNGELFGASSAKNFRKLLAVPAVAASLAFGITACSAVDDTPDIVVTTNILGDVVSHIVGDSADVQVLMKPNAD
PHSFGVSAQDAAAMEHADLIVANGLGLEEGLQSNVDNAKNQGVPVLEVGEHIDVIDYSPGVPDPHFWTDPARMIVATEVI
EAELIKELDPSLTESITQSAQHYREELVALDEEVTELLSSVAPENRKLVTNHNVFGYLANRFNYIVIGTIVPGGSTLAAP
SASDLNDISTAIEDNNVPAIFTDTSSPQRLAEVLASNAGIDVQVVSIFTESLTDADGEAPTYISMQKINAERIASTLS
>Mature_318_residues
MILKDIFNNGELFGASSAKNFRKLLAVPAVAASLAFGITACSAVDDTPDIVVTTNILGDVVSHIVGDSADVQVLMKPNAD
PHSFGVSAQDAAAMEHADLIVANGLGLEEGLQSNVDNAKNQGVPVLEVGEHIDVIDYSPGVPDPHFWTDPARMIVATEVI
EAELIKELDPSLTESITQSAQHYREELVALDEEVTELLSSVAPENRKLVTNHNVFGYLANRFNYIVIGTIVPGGSTLAAP
SASDLNDISTAIEDNNVPAIFTDTSSPQRLAEVLASNAGIDVQVVSIFTESLTDADGEAPTYISMQKINAERIASTLS

Specific function: Part of an ATP-driven transport system troABCD for zinc. Substrate-binding protein involved in the transport of zinc across the cytoplasmic membrane [H]

COG id: COG0803

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006127
- InterPro:   IPR006129
- InterPro:   IPR006128 [H]

Pfam domain/function: PF01297 SBP_bac_9 [H]

EC number: NA

Molecular weight: Translated: 33680; Mature: 33680

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKDIFNNGELFGASSAKNFRKLLAVPAVAASLAFGITACSAVDDTPDIVVTTNILGDV
CCCHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHH
VSHIVGDSADVQVLMKPNADPHSFGVSAQDAAAMEHADLIVANGLGLEEGLQSNVDNAKN
HHHHHCCCCCEEEEECCCCCCHHCCCCCHHHHHHHHCCEEEECCCCHHHHHHHCCCCHHH
QGVPVLEVGEHIDVIDYSPGVPDPHFWTDPARMIVATEVIEAELIKELDPSLTESITQSA
CCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
QHYREELVALDEEVTELLSSVAPENRKLVTNHNVFGYLANRFNYIVIGTIVPGGSTLAAP
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCCEEEEEEEECCCCCCCCC
SASDLNDISTAIEDNNVPAIFTDTSSPQRLAEVLASNAGIDVQVVSIFTESLTDADGEAP
CCCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCC
TYISMQKINAERIASTLS
CEEEHHHCCHHHHHHHCC
>Mature Secondary Structure
MILKDIFNNGELFGASSAKNFRKLLAVPAVAASLAFGITACSAVDDTPDIVVTTNILGDV
CCCHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHH
VSHIVGDSADVQVLMKPNADPHSFGVSAQDAAAMEHADLIVANGLGLEEGLQSNVDNAKN
HHHHHCCCCCEEEEECCCCCCHHCCCCCHHHHHHHHCCEEEECCCCHHHHHHHCCCCHHH
QGVPVLEVGEHIDVIDYSPGVPDPHFWTDPARMIVATEVIEAELIKELDPSLTESITQSA
CCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
QHYREELVALDEEVTELLSSVAPENRKLVTNHNVFGYLANRFNYIVIGTIVPGGSTLAAP
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCCEEEEEEEECCCCCCCCC
SASDLNDISTAIEDNNVPAIFTDTSSPQRLAEVLASNAGIDVQVVSIFTESLTDADGEAP
CCCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCC
TYISMQKINAERIASTLS
CEEEHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768866; 9332349; 9665876; 10400603; 10404217 [H]