Click here to switch to the map view.

The map label for this gene is yeiE [C]

Identifier: 145294062

GI number: 145294062

Start: 21934

End: 22830

Strand: Direct

Name: yeiE [C]

Synonym: cgR_0020

Alternate gene names: 145294062

Gene position: 21934-22830 (Clockwise)

Preceding gene: 145294060

Following gene: 145294063

Centisome position: 0.66

GC content: 52.29

Gene sequence:

>897_bases
ATGGATAATGGGTGGCCGAACCTGCAAACTCTCGCACTCTTTGTGGCGATTGTGGAAGAGGGGAGCCTCGGTGCCGGTGC
TCGAAAAGTCGGAATGGCCCAACCCAATGCCAGTCGGGCTATCGCAGAGCTTGAGGCAGACATGAAAGCCGAATTGTTGG
TACGTCATCCTCGAGGTTCACATCCGACGGCGGCTGGTCTTGCATTAATTGAGCACTCGCGCAATCTGCTTCAATCTGTA
CAAGAATTTACTGAATGGGTGACAGAGGGACGAACTGAGCAGCCGCTGAAATTGCATGTCGGGGCCAGTATGACCATTGC
CGAGGCTCTACTTCCCGCTTGGGTTGCGGACATGCGCGCGCGTTTTCCTGCCTCCCGTGTCGACGTCTCCGTGATGAATT
CTTCTCAAGTAATTGAAGCCGTCCAGAAAGGGCACTTGCAACTAGGTTTTATTGAAACACCGCATGTTCCCGTACGGCTT
CATGCTCGTGTGGTGCAAGAGGACAAGCTGATTGTGGTGATTTCGCCTAATCATGAGTGGGCTAATCGCACGGGTAAAAT
CAGTCTCCGGGAGTTGTCGGAAACTCCGCTGATTGTGAGGGAAATCGGCTCAGGTACCCGAGAAGCATTACAAGAATTAC
TTGCGGATTATGACATGGCTGAGCCGATTCAAGTGTTAAACAGCAATGCTGCGGTACGTGTTGTTGTTGAAGCAGGGGCA
GGTCCTGCAGTACTTGGTGAATTAGCCTTGCGTGATCATCTTGCTCTCGGCAGACTGTTGAGTGTGCCATTTGAAGGCAG
TGGAGTTACTCGTCCTCTTACAGCTGTGTGGAGTGGACCCCGCAGATTGCCGATTCTAGCGGGAGAATTAGTGTCCATCG
CATCGAACCACATCTGA

Upstream 100 bases:

>100_bases
CGGCGTCGATTCCAGAAGGTTTGTAGACATGCTTCAAGGTTGCGCTAATTGAAAAGAACGCGGTAGACGGTACTTTCATA
TCCACCCATATAATGTTGAT

Downstream 100 bases:

>100_bases
TTTTGAGCCCTGGCTAACGGATTGTTTTTGACAGATTGGAATGACAATAATGAACGAGATTCCAGAATGGTTGACTCTTG
TATCTGTTGAAGCAGGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MDNGWPNLQTLALFVAIVEEGSLGAGARKVGMAQPNASRAIAELEADMKAELLVRHPRGSHPTAAGLALIEHSRNLLQSV
QEFTEWVTEGRTEQPLKLHVGASMTIAEALLPAWVADMRARFPASRVDVSVMNSSQVIEAVQKGHLQLGFIETPHVPVRL
HARVVQEDKLIVVISPNHEWANRTGKISLRELSETPLIVREIGSGTREALQELLADYDMAEPIQVLNSNAAVRVVVEAGA
GPAVLGELALRDHLALGRLLSVPFEGSGVTRPLTAVWSGPRRLPILAGELVSIASNHI

Sequences:

>Translated_298_residues
MDNGWPNLQTLALFVAIVEEGSLGAGARKVGMAQPNASRAIAELEADMKAELLVRHPRGSHPTAAGLALIEHSRNLLQSV
QEFTEWVTEGRTEQPLKLHVGASMTIAEALLPAWVADMRARFPASRVDVSVMNSSQVIEAVQKGHLQLGFIETPHVPVRL
HARVVQEDKLIVVISPNHEWANRTGKISLRELSETPLIVREIGSGTREALQELLADYDMAEPIQVLNSNAAVRVVVEAGA
GPAVLGELALRDHLALGRLLSVPFEGSGVTRPLTAVWSGPRRLPILAGELVSIASNHI
>Mature_298_residues
MDNGWPNLQTLALFVAIVEEGSLGAGARKVGMAQPNASRAIAELEADMKAELLVRHPRGSHPTAAGLALIEHSRNLLQSV
QEFTEWVTEGRTEQPLKLHVGASMTIAEALLPAWVADMRARFPASRVDVSVMNSSQVIEAVQKGHLQLGFIETPHVPVRL
HARVVQEDKLIVVISPNHEWANRTGKISLRELSETPLIVREIGSGTREALQELLADYDMAEPIQVLNSNAAVRVVVEAGA
GPAVLGELALRDHLALGRLLSVPFEGSGVTRPLTAVWSGPRRLPILAGELVSIASNHI

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=265, Percent_Identity=29.0566037735849, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1787879, Length=246, Percent_Identity=26.0162601626016, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI87081904, Length=271, Percent_Identity=22.8782287822878, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1790399, Length=255, Percent_Identity=23.921568627451, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1789506, Length=295, Percent_Identity=21.3559322033898, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1789204, Length=273, Percent_Identity=24.1758241758242, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1787601, Length=168, Percent_Identity=22.0238095238095, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32164; Mature: 32164

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNGWPNLQTLALFVAIVEEGSLGAGARKVGMAQPNASRAIAELEADMKAELLVRHPRGS
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCEEHEEECCCCC
HPTAAGLALIEHSRNLLQSVQEFTEWVTEGRTEQPLKLHVGASMTIAEALLPAWVADMRA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH
RFPASRVDVSVMNSSQVIEAVQKGHLQLGFIETPHVPVRLHARVVQEDKLIVVISPNHEW
HCCHHHCEEEECCHHHHHHHHHHCCEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCHH
ANRTGKISLRELSETPLIVREIGSGTREALQELLADYDMAEPIQVLNSNAAVRVVVEAGA
HCCCCCEEEEHHCCCCCHHHHHCCCHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCC
GPAVLGELALRDHLALGRLLSVPFEGSGVTRPLTAVWSGPRRLPILAGELVSIASNHI
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MDNGWPNLQTLALFVAIVEEGSLGAGARKVGMAQPNASRAIAELEADMKAELLVRHPRGS
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCEEHEEECCCCC
HPTAAGLALIEHSRNLLQSVQEFTEWVTEGRTEQPLKLHVGASMTIAEALLPAWVADMRA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH
RFPASRVDVSVMNSSQVIEAVQKGHLQLGFIETPHVPVRLHARVVQEDKLIVVISPNHEW
HCCHHHCEEEECCHHHHHHHHHHCCEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCHH
ANRTGKISLRELSETPLIVREIGSGTREALQELLADYDMAEPIQVLNSNAAVRVVVEAGA
HCCCCCEEEEHHCCCCCHHHHHCCCHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCC
GPAVLGELALRDHLALGRLLSVPFEGSGVTRPLTAVWSGPRRLPILAGELVSIASNHI
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]