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The map label for this gene is soj [H]

Identifier: 138897063

GI number: 138897063

Start: 3541780

End: 3542541

Strand: Reverse

Name: soj [H]

Synonym: GTNG_3436

Alternate gene names: 138897063

Gene position: 3542541-3541780 (Counterclockwise)

Preceding gene: 138897064

Following gene: 138897062

Centisome position: 99.78

GC content: 48.56

Gene sequence:

>762_bases
GTGGGCAAAGTCATTGCTATTGCAAACCAGAAAGGCGGAGTTGGGAAAACGACGACAGCCGTCAACTTGTCGGCTTGTTT
GGCGTATCTCGGAAAAAAAGTGCTGCTTGTTGACGTCGATCCGCAAGGGAACGCAACGAGCGGAATCGGCATTGAAAAGG
GCGATGTCGACGAATGCATTTACAACGTCATTATTGGCGATATGAAAGCAAAAGATGTCATTCGGCCGACAAATATCGAA
AATTTATACGTAATTCCGGCGACGATCCAGCTAGCAGGCGCAGAAATTGAGCTCGTTTCGGTCATTTCCCGTGAAATTCG
GCTTAAAAACGCGCTCGATCCGCTCAAGACTGTGTATGATTTTATCATTATTGACTGCCCTCCTTCGTTAGGATTGCTGA
CGTTAAATGCGTTGACGGCGGCGGATGCTGTCCTGATCCCTGTTCAGTGCGAATATTATGCGCTTGAAGGGCTCAGCCAG
CTGCTGAACACGATCCGGCTCGTGCAGCGGCACTTAAACTATGATTTACGCCTTGAAGGCGTCTTGTTAACCATGCTTGA
TGCACGGACGAATTTAGGTTTACAAGTGATTCAAGAAGTCAAAAAGTATTTCCGCGAAAAAGTGTACGAAACGATCATCC
CGAGAAACGTGCGGCTGAGCGAGGCGCCAAGCCACGGCAAGCCGATTATTTTATACGATGTCAAATCGCGGGGAGCGGAA
GTGTATTTGGAACTGGCGAAGGAGGTGCTTGAACGTGGCTAA

Upstream 100 bases:

>100_bases
GCGCGGCTGATGGGGTTTTTTCTTTCAGAAAACAAAGTCATTTTTCTTTTTTTCATGATAAAATAGAATTTATGAGTAAT
AGATAGAGGTAGGTGGCATC

Downstream 100 bases:

>100_bases
AGGTCTCGGTAAAGGCATCAATGCGCTGTTTAACAACCTCTCGCTCAACGGGGAAGAGGAAACCATCTTCGAAGTCAGCA
TTTCTGATCTCCATCCGAAC

Product: forespore chromosome partitioning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MGKVIAIANQKGGVGKTTTAVNLSACLAYLGKKVLLVDVDPQGNATSGIGIEKGDVDECIYNVIIGDMKAKDVIRPTNIE
NLYVIPATIQLAGAEIELVSVISREIRLKNALDPLKTVYDFIIIDCPPSLGLLTLNALTAADAVLIPVQCEYYALEGLSQ
LLNTIRLVQRHLNYDLRLEGVLLTMLDARTNLGLQVIQEVKKYFREKVYETIIPRNVRLSEAPSHGKPIILYDVKSRGAE
VYLELAKEVLERG

Sequences:

>Translated_253_residues
MGKVIAIANQKGGVGKTTTAVNLSACLAYLGKKVLLVDVDPQGNATSGIGIEKGDVDECIYNVIIGDMKAKDVIRPTNIE
NLYVIPATIQLAGAEIELVSVISREIRLKNALDPLKTVYDFIIIDCPPSLGLLTLNALTAADAVLIPVQCEYYALEGLSQ
LLNTIRLVQRHLNYDLRLEGVLLTMLDARTNLGLQVIQEVKKYFREKVYETIIPRNVRLSEAPSHGKPIILYDVKSRGAE
VYLELAKEVLERG
>Mature_252_residues
GKVIAIANQKGGVGKTTTAVNLSACLAYLGKKVLLVDVDPQGNATSGIGIEKGDVDECIYNVIIGDMKAKDVIRPTNIEN
LYVIPATIQLAGAEIELVSVISREIRLKNALDPLKTVYDFIIIDCPPSLGLLTLNALTAADAVLIPVQCEYYALEGLSQL
LNTIRLVQRHLNYDLRLEGVLLTMLDARTNLGLQVIQEVKKYFREKVYETIIPRNVRLSEAPSHGKPIILYDVKSRGAEV
YLELAKEVLERG

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

Organism=Escherichia coli, GI1787423, Length=257, Percent_Identity=27.6264591439689, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27772; Mature: 27641

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKVIAIANQKGGVGKTTTAVNLSACLAYLGKKVLLVDVDPQGNATSGIGIEKGDVDECI
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHHHH
YNVIIGDMKAKDVIRPTNIENLYVIPATIQLAGAEIELVSVISREIRLKNALDPLKTVYD
HHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
FIIIDCPPSLGLLTLNALTAADAVLIPVQCEYYALEGLSQLLNTIRLVQRHLNYDLRLEG
EEEEECCCCCCEEEEHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
VLLTMLDARTNLGLQVIQEVKKYFREKVYETIIPRNVRLSEAPSHGKPIILYDVKSRGAE
EEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEECCCCCHH
VYLELAKEVLERG
HHHHHHHHHHHCC
>Mature Secondary Structure 
GKVIAIANQKGGVGKTTTAVNLSACLAYLGKKVLLVDVDPQGNATSGIGIEKGDVDECI
CCEEEEECCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHHHH
YNVIIGDMKAKDVIRPTNIENLYVIPATIQLAGAEIELVSVISREIRLKNALDPLKTVYD
HHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
FIIIDCPPSLGLLTLNALTAADAVLIPVQCEYYALEGLSQLLNTIRLVQRHLNYDLRLEG
EEEEECCCCCCEEEEHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
VLLTMLDARTNLGLQVIQEVKKYFREKVYETIIPRNVRLSEAPSHGKPIILYDVKSRGAE
EEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEECCCCCHH
VYLELAKEVLERG
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]