| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is yyaC [H]
Identifier: 138897060
GI number: 138897060
Start: 3539467
End: 3540090
Strand: Direct
Name: yyaC [H]
Synonym: GTNG_3433
Alternate gene names: 138897060
Gene position: 3539467-3540090 (Clockwise)
Preceding gene: 138897053
Following gene: NA
Centisome position: 99.69
GC content: 51.92
Gene sequence:
>624_bases ATGAGCATACCGTCGATATTTTTCTCTTCCAAGGAGGATAGAAATCGTATTTTTTACGATGAACAAGGAGCGGTGGCCGC GATTGCCTGGCGGATCGCTTCGCTGCTTCCGGATCCGCTCGTCCAACCGATCGCCATCGTCTGCATCGGCACAGACCGTT CAACCGGTGATTCGCTCGGACCGCTTGTCGGCACGATGCTACAGGAGAAGCCATTGACCCGCTTTCACGTCTACGGAACG CTTGAAGAACCGATCCACGCTGTCAACCTAGAAGAAAAAGTGGAAGCCATTCAGCTCATTCATGGTGATCCATTTATGAT CGCGGTCGATGCTTGTCTCGGACGGCTGAAAAGTGTTGGCGCCATCACTGTAGCCAAAGGACCGGTTCGCCCTGGAGCTG GGGTGAATAAACAGCTTCTTCCCGTCGGCGACGCCCATATTACCGGAGTAGTGAATGTGAGCGGATTTATGGAATTTTTC GTCCTGCAAAATACACGCCTTCATCTCGTCATGAATATGGCCAAAACGATCGCCAACGGCATTTATGAGGCAGAACGGCA TCTCATCCGGAAGGAACGGCTTGCCGTCCAACCGTTTCCGAAAGATCGACATTCATTATGGTAG
Upstream 100 bases:
>100_bases TGCACCAGATGAAAAAGAAAAACAAACGTCAAGATGTATATCATTCTTTTATTTTCCGTATACTGTTAATACTTTTGAAT CGAAAGTAGGAGTGAAGTGA
Downstream 100 bases:
>100_bases GTGGCCAATCCCCCTCTTGACAAGCTATTTCAAGAAGGGGATTTCTTTTTTCCTTCCCTTAAAGGTGTCGACAGCAACTT TTGTTAAACGAACGAAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSIPSIFFSSKEDRNRIFYDEQGAVAAIAWRIASLLPDPLVQPIAIVCIGTDRSTGDSLGPLVGTMLQEKPLTRFHVYGT LEEPIHAVNLEEKVEAIQLIHGDPFMIAVDACLGRLKSVGAITVAKGPVRPGAGVNKQLLPVGDAHITGVVNVSGFMEFF VLQNTRLHLVMNMAKTIANGIYEAERHLIRKERLAVQPFPKDRHSLW
Sequences:
>Translated_207_residues MSIPSIFFSSKEDRNRIFYDEQGAVAAIAWRIASLLPDPLVQPIAIVCIGTDRSTGDSLGPLVGTMLQEKPLTRFHVYGT LEEPIHAVNLEEKVEAIQLIHGDPFMIAVDACLGRLKSVGAITVAKGPVRPGAGVNKQLLPVGDAHITGVVNVSGFMEFF VLQNTRLHLVMNMAKTIANGIYEAERHLIRKERLAVQPFPKDRHSLW >Mature_206_residues SIPSIFFSSKEDRNRIFYDEQGAVAAIAWRIASLLPDPLVQPIAIVCIGTDRSTGDSLGPLVGTMLQEKPLTRFHVYGTL EEPIHAVNLEEKVEAIQLIHGDPFMIAVDACLGRLKSVGAITVAKGPVRPGAGVNKQLLPVGDAHITGVVNVSGFMEFFV LQNTRLHLVMNMAKTIANGIYEAERHLIRKERLAVQPFPKDRHSLW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009665 - InterPro: IPR000671 [H]
Pfam domain/function: PF06866 DUF1256 [H]
EC number: NA
Molecular weight: Translated: 22773; Mature: 22642
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPSIFFSSKEDRNRIFYDEQGAVAAIAWRIASLLPDPLVQPIAIVCIGTDRSTGDSLG CCCCCCEECCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHH PLVGTMLQEKPLTRFHVYGTLEEPIHAVNLEEKVEAIQLIHGDPFMIAVDACLGRLKSVG HHHHHHHHCCCCCEEEEEECHHCCHHHCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCC AITVAKGPVRPGAGVNKQLLPVGDAHITGVVNVSGFMEFFVLQNTRLHLVMNMAKTIANG EEEEECCCCCCCCCCCCCEEECCCCEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHH IYEAERHLIRKERLAVQPFPKDRHSLW HHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SIPSIFFSSKEDRNRIFYDEQGAVAAIAWRIASLLPDPLVQPIAIVCIGTDRSTGDSLG CCCCCEECCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHH PLVGTMLQEKPLTRFHVYGTLEEPIHAVNLEEKVEAIQLIHGDPFMIAVDACLGRLKSVG HHHHHHHHCCCCCEEEEEECHHCCHHHCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCC AITVAKGPVRPGAGVNKQLLPVGDAHITGVVNVSGFMEFFVLQNTRLHLVMNMAKTIANG EEEEECCCCCCCCCCCCCEEECCCCEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHH IYEAERHLIRKERLAVQPFPKDRHSLW HHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1552862; 7584024; 9384377 [H]