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The map label for this gene is lytR [H]

Identifier: 138896897

GI number: 138896897

Start: 3377652

End: 3378623

Strand: Direct

Name: lytR [H]

Synonym: GTNG_3266

Alternate gene names: 138896897

Gene position: 3377652-3378623 (Clockwise)

Preceding gene: 138896885

Following gene: 138896908

Centisome position: 95.14

GC content: 46.4

Gene sequence:

>972_bases
ATGATGGATTTTACAATTGAAAGAAGGTTGAATATGAGAGCAAAACGACGTAAAAAACGAAAATGGCTGCGCTGGGTTGG
GATCATCGTCGCATTGCTTATCATCGGCTCCGGAGTGTTCGCGTATTCTGTCTACCATAACCTCAAACAAACGGCGAACG
AAATGCATGAAAAAGTGAACTGGAAGTCGGAAAAGCGCCAAGAAGAAGTATCGTTTGAGCGGAAAACGCCGATTTCGATT
TTGTTAATGGGCGTCGATGAGCGAAAAGGGGATAAAGGACGCGCCGATACGCTTATCGTCTTGACAGTCAATCCGAACAA
GCAATCGATTGAGATGGTGAGCGTGCCGCGCGATACGAGAACGGAGATCATCGGTAAAGGAATGCAAGATAAAATCAATC
ACTCGTACGCCTTTGGTGGGGTCGAGATGACGATGGCGACGGTCGAGCACTTCCTAGATATCCCGATCGATTATTACATT
AAAGTCAATATGGAAAGCTTTCGCGATATTGTCGATGCGGTCGGCGGGGTAACAGTGAACAACCCGTTTGCCTTTACGTA
TGAAGGAACACACTTCCCGAAAGGGGAAATTACGCTAAACGGGGAAGAGGCGTTGAAATATTCGCGCATGCGTTATGATG
ACCCGCGTGGCGATTTCGGACGTCAAGACCGCCAAAAACAAATCATTCAAGCCATTATTGAGAAAGGCGCAAGCTTCTCA
TCACTCACGAACTATAGTGATGTACTCGCCGCGATCGGGAAGAACATTAAGACGAACTTGACATTTGAGGACATGAAAGA
GATTCAGGCGAATTACAAAGACGCCCGCAAGCAAATTAAGCAGCTGCACATTACCGGCCAAGGGACGAAAATTAACGGCA
TCTATTATTTACTCGTACCAGACAGCGAGCGGACGGCGATTTCGAATGAGTTAAAAGAACATTTAGAGCTATCAGCGACA
GCATCACGATAA

Upstream 100 bases:

>100_bases
TGTTTGTACTTGTGGGTTAAAATGGACATCATTCGCTAAAAATTGACAAGTTCACACATTATGCTAGTTGTTTCACCAAG
GAAAACAAACTATAATCATA

Downstream 100 bases:

>100_bases
ACATAACGCGCACTCGATTGGGGTGCGCGTCTTTTATTGGGCAATGAAATATTCGGCCAGCGCCTCCGCCCATCGTTTAG
CACCTTCCGTAGTCGGGAGG

Product: membrane-bound transcriptional regulator LytR

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MMDFTIERRLNMRAKRRKKRKWLRWVGIIVALLIIGSGVFAYSVYHNLKQTANEMHEKVNWKSEKRQEEVSFERKTPISI
LLMGVDERKGDKGRADTLIVLTVNPNKQSIEMVSVPRDTRTEIIGKGMQDKINHSYAFGGVEMTMATVEHFLDIPIDYYI
KVNMESFRDIVDAVGGVTVNNPFAFTYEGTHFPKGEITLNGEEALKYSRMRYDDPRGDFGRQDRQKQIIQAIIEKGASFS
SLTNYSDVLAAIGKNIKTNLTFEDMKEIQANYKDARKQIKQLHITGQGTKINGIYYLLVPDSERTAISNELKEHLELSAT
ASR

Sequences:

>Translated_323_residues
MMDFTIERRLNMRAKRRKKRKWLRWVGIIVALLIIGSGVFAYSVYHNLKQTANEMHEKVNWKSEKRQEEVSFERKTPISI
LLMGVDERKGDKGRADTLIVLTVNPNKQSIEMVSVPRDTRTEIIGKGMQDKINHSYAFGGVEMTMATVEHFLDIPIDYYI
KVNMESFRDIVDAVGGVTVNNPFAFTYEGTHFPKGEITLNGEEALKYSRMRYDDPRGDFGRQDRQKQIIQAIIEKGASFS
SLTNYSDVLAAIGKNIKTNLTFEDMKEIQANYKDARKQIKQLHITGQGTKINGIYYLLVPDSERTAISNELKEHLELSAT
ASR
>Mature_323_residues
MMDFTIERRLNMRAKRRKKRKWLRWVGIIVALLIIGSGVFAYSVYHNLKQTANEMHEKVNWKSEKRQEEVSFERKTPISI
LLMGVDERKGDKGRADTLIVLTVNPNKQSIEMVSVPRDTRTEIIGKGMQDKINHSYAFGGVEMTMATVEHFLDIPIDYYI
KVNMESFRDIVDAVGGVTVNNPFAFTYEGTHFPKGEITLNGEEALKYSRMRYDDPRGDFGRQDRQKQIIQAIIEKGASFS
SLTNYSDVLAAIGKNIKTNLTFEDMKEIQANYKDARKQIKQLHITGQGTKINGIYYLLVPDSERTAISNELKEHLELSAT
ASR

Specific function: Plays an attenuator role for both its own and lytABC operon expression, and thus regulates the expression of the major autolytic amidase of B.subtilis [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 36993; Mature: 36993

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDFTIERRLNMRAKRRKKRKWLRWVGIIVALLIIGSGVFAYSVYHNLKQTANEMHEKVN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
WKSEKRQEEVSFERKTPISILLMGVDERKGDKGRADTLIVLTVNPNKQSIEMVSVPRDTR
CCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCHHH
TEIIGKGMQDKINHSYAFGGVEMTMATVEHFLDIPIDYYIKVNMESFRDIVDAVGGVTVN
HHHHCCCCHHHHCCCEEECCHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHCCEEEC
NPFAFTYEGTHFPKGEITLNGEEALKYSRMRYDDPRGDFGRQDRQKQIIQAIIEKGASFS
CCEEEEECCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH
SLTNYSDVLAAIGKNIKTNLTFEDMKEIQANYKDARKQIKQLHITGQGTKINGIYYLLVP
HHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEEEEEEC
DSERTAISNELKEHLELSATASR
CCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMDFTIERRLNMRAKRRKKRKWLRWVGIIVALLIIGSGVFAYSVYHNLKQTANEMHEKVN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
WKSEKRQEEVSFERKTPISILLMGVDERKGDKGRADTLIVLTVNPNKQSIEMVSVPRDTR
CCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCHHH
TEIIGKGMQDKINHSYAFGGVEMTMATVEHFLDIPIDYYIKVNMESFRDIVDAVGGVTVN
HHHHCCCCHHHHCCCEEECCHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHCCEEEC
NPFAFTYEGTHFPKGEITLNGEEALKYSRMRYDDPRGDFGRQDRQKQIIQAIIEKGASFS
CCEEEEECCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH
SLTNYSDVLAAIGKNIKTNLTFEDMKEIQANYKDARKQIKQLHITGQGTKINGIYYLLVP
HHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEEEEEEC
DSERTAISNELKEHLELSATASR
CCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1357079; 9384377; 8126437 [H]