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The map label for this gene is ygbK [C]

Identifier: 138896866

GI number: 138896866

Start: 3342308

End: 3343600

Strand: Direct

Name: ygbK [C]

Synonym: GTNG_3231

Alternate gene names: 138896866

Gene position: 3342308-3343600 (Clockwise)

Preceding gene: 138896865

Following gene: 138896867

Centisome position: 94.14

GC content: 47.25

Gene sequence:

>1293_bases
ATGAAAATCGCAATCATTGCAGATGACTTAACGGGTGCAAATGACAGCGGCGCACAATTTGCTTACCACGGATTAAATAC
ATCCGTTCTGTTTCAACCTGATCCGAACGCTTGGCATTTATCTAATGCGGTTGTCATTGATACTGATACCCGTTCCTTAC
CTAAAGAAAAAGCATACGAGAAGGTAAAAAGTGTGTCTGAAACAATTAAAAAGTATGCTACACTGGTTTACAAAAAAATT
GATTCCACCTTGCGAGGGAATATCGGCGCAGAAATCGATGCCATTTACGACACCTTGCAGCCGACATTTATGATGATCGC
ACCGGCTTATCCGCAAAATGGACGAACGGTTTATCAAGGATACCACTTTTTGCATGGCACCTTGCTTCATGAAACCGAGC
TATCAAGGGATCCGAAATGTCCGATCGACGAATCATCCATTCCCCGCTTGCTTGCCAAACAGACGAAGCGGCCGATCGGG
GTGATTGATTATCAAACCCTTCGTCTCGGCTTCGACAAGGTGAAGGAGCAATTGGATCACTACCGGGCTGACGGCATCCC
GTATATCGTCTTTGACTCTGTCAGCGAAGACGATTTACGTGATATCGCTCAATATGTGCGCCAGCTCAATGAACAAGTCG
TCTGGGTCGGTTCGGCTGGATTGGCGTATTATCTTCCCGAAGTATATGACCTGCAAACATCGCCCAAAACGATGATCATA
AAACCGAACAAACGACCGATCTTGCTCGTTGTTGGGAGTGTAAGTCAAGTATCGCGGACGCAGCTTGATCGTGTTCTTTC
TTTACCAAACGTCAAAGGCATCCAAGTCGATTCTGTACAACTGGTGTGCGACCACCAGTCCCGCATCACCGAAATGGAAA
AGGCGTTGCGCCAGGCCGAGAACGAGGTAAAACAAGGATTCCATATCGTCCTCTATTCTTCCGCTTCCTCTAGTGACATC
CAACGAGTACGAGCCATCGGGGAAGCAGGCGGACGAACCCCGATCGAAACGAGCAACCTCATTGCTGAGAGCTTGGGGGA
AGTCGCCGCCGAGTTGATCCGTAACGGATATTTTGGAGCCATGGTGTTAACAGGCGGAGATACTGCCAAATATGTATGTA
GTCAAATAGGAGCGACCGGTTTTGAATTGATTGATGAAATCGAACCAGGGGTACCCATAGCAAAACTGATCCATGAGTCG
GAAATGTACGTCGTTACCAAGGCTGGAGCCTTTGGTTCAGAAAACACTTTAATTCAAGCCGTTCATCAGTTACAAGGAGT
CGATGCCAAATGA

Upstream 100 bases:

>100_bases
CAAAAAATTAGAAAAGAAGAATAACAGCAAGAACACCGTCAAGTATCAAATGGGTTCATAAATTGGCACTTCCCTTACCT
TAAGGAAGGAGATACACACC

Downstream 100 bases:

>100_bases
AACCTACCATTGGAATCACGATGGGAGATGCCGCAGGAGTTGGTCCGGAGATTATCGTTAAAGCCCTGCAAAACTCGTCT
ATCTACGAACAGTGCCATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MKIAIIADDLTGANDSGAQFAYHGLNTSVLFQPDPNAWHLSNAVVIDTDTRSLPKEKAYEKVKSVSETIKKYATLVYKKI
DSTLRGNIGAEIDAIYDTLQPTFMMIAPAYPQNGRTVYQGYHFLHGTLLHETELSRDPKCPIDESSIPRLLAKQTKRPIG
VIDYQTLRLGFDKVKEQLDHYRADGIPYIVFDSVSEDDLRDIAQYVRQLNEQVVWVGSAGLAYYLPEVYDLQTSPKTMII
KPNKRPILLVVGSVSQVSRTQLDRVLSLPNVKGIQVDSVQLVCDHQSRITEMEKALRQAENEVKQGFHIVLYSSASSSDI
QRVRAIGEAGGRTPIETSNLIAESLGEVAAELIRNGYFGAMVLTGGDTAKYVCSQIGATGFELIDEIEPGVPIAKLIHES
EMYVVTKAGAFGSENTLIQAVHQLQGVDAK

Sequences:

>Translated_430_residues
MKIAIIADDLTGANDSGAQFAYHGLNTSVLFQPDPNAWHLSNAVVIDTDTRSLPKEKAYEKVKSVSETIKKYATLVYKKI
DSTLRGNIGAEIDAIYDTLQPTFMMIAPAYPQNGRTVYQGYHFLHGTLLHETELSRDPKCPIDESSIPRLLAKQTKRPIG
VIDYQTLRLGFDKVKEQLDHYRADGIPYIVFDSVSEDDLRDIAQYVRQLNEQVVWVGSAGLAYYLPEVYDLQTSPKTMII
KPNKRPILLVVGSVSQVSRTQLDRVLSLPNVKGIQVDSVQLVCDHQSRITEMEKALRQAENEVKQGFHIVLYSSASSSDI
QRVRAIGEAGGRTPIETSNLIAESLGEVAAELIRNGYFGAMVLTGGDTAKYVCSQIGATGFELIDEIEPGVPIAKLIHES
EMYVVTKAGAFGSENTLIQAVHQLQGVDAK
>Mature_430_residues
MKIAIIADDLTGANDSGAQFAYHGLNTSVLFQPDPNAWHLSNAVVIDTDTRSLPKEKAYEKVKSVSETIKKYATLVYKKI
DSTLRGNIGAEIDAIYDTLQPTFMMIAPAYPQNGRTVYQGYHFLHGTLLHETELSRDPKCPIDESSIPRLLAKQTKRPIG
VIDYQTLRLGFDKVKEQLDHYRADGIPYIVFDSVSEDDLRDIAQYVRQLNEQVVWVGSAGLAYYLPEVYDLQTSPKTMII
KPNKRPILLVVGSVSQVSRTQLDRVLSLPNVKGIQVDSVQLVCDHQSRITEMEKALRQAENEVKQGFHIVLYSSASSSDI
QRVRAIGEAGGRTPIETSNLIAESLGEVAAELIRNGYFGAMVLTGGDTAKYVCSQIGATGFELIDEIEPGVPIAKLIHES
EMYVVTKAGAFGSENTLIQAVHQLQGVDAK

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=402, Percent_Identity=26.3681592039801, Blast_Score=127, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 47459; Mature: 47459

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAIIADDLTGANDSGAQFAYHGLNTSVLFQPDPNAWHLSNAVVIDTDTRSLPKEKAYE
CEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCEEECCEEEEECCCCCCCHHHHHH
KVKSVSETIKKYATLVYKKIDSTLRGNIGAEIDAIYDTLQPTFMMIAPAYPQNGRTVYQG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCEEECC
YHFLHGTLLHETELSRDPKCPIDESSIPRLLAKQTKRPIGVIDYQTLRLGFDKVKEQLDH
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH
YRADGIPYIVFDSVSEDDLRDIAQYVRQLNEQVVWVGSAGLAYYLPEVYDLQTSPKTMII
HHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCHHEECCCCCCEEEE
KPNKRPILLVVGSVSQVSRTQLDRVLSLPNVKGIQVDSVQLVCDHQSRITEMEKALRQAE
CCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCEEEEECCHHHHHHHHHHHHHHH
NEVKQGFHIVLYSSASSSDIQRVRAIGEAGGRTPIETSNLIAESLGEVAAELIRNGYFGA
HHHHCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
MVLTGGDTAKYVCSQIGATGFELIDEIEPGVPIAKLIHESEMYVVTKAGAFGSENTLIQA
EEEECCCHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCCCCCCHHHHHH
VHQLQGVDAK
HHHHHCCCCC
>Mature Secondary Structure
MKIAIIADDLTGANDSGAQFAYHGLNTSVLFQPDPNAWHLSNAVVIDTDTRSLPKEKAYE
CEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCEEECCEEEEECCCCCCCHHHHHH
KVKSVSETIKKYATLVYKKIDSTLRGNIGAEIDAIYDTLQPTFMMIAPAYPQNGRTVYQG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCEEECC
YHFLHGTLLHETELSRDPKCPIDESSIPRLLAKQTKRPIGVIDYQTLRLGFDKVKEQLDH
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH
YRADGIPYIVFDSVSEDDLRDIAQYVRQLNEQVVWVGSAGLAYYLPEVYDLQTSPKTMII
HHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCHHEECCCCCCEEEE
KPNKRPILLVVGSVSQVSRTQLDRVLSLPNVKGIQVDSVQLVCDHQSRITEMEKALRQAE
CCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCEEEEECCHHHHHHHHHHHHHHH
NEVKQGFHIVLYSSASSSDIQRVRAIGEAGGRTPIETSNLIAESLGEVAAELIRNGYFGA
HHHHCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
MVLTGGDTAKYVCSQIGATGFELIDEIEPGVPIAKLIHESEMYVVTKAGAFGSENTLIQA
EEEECCCHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCCCCCCHHHHHH
VHQLQGVDAK
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]