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The map label for this gene is yulF [H]

Identifier: 138896778

GI number: 138896778

Start: 3243513

End: 3244499

Strand: Direct

Name: yulF [H]

Synonym: GTNG_3141

Alternate gene names: 138896778

Gene position: 3243513-3244499 (Clockwise)

Preceding gene: 138896777

Following gene: 138896779

Centisome position: 91.36

GC content: 51.87

Gene sequence:

>987_bases
ATGGTGCGATTCGCGACAATCGGCACAAACTGGATCACCGAAGCGTTTATCAATGCCGCGCGCCTCGTCGATTCCTTCGA
GCTCGCTGCTGTCTACTCGCGAACAGACGAAACCGCTAAGCGATTTGCCGAGAAAGTCGGGGCGCCGCGCACATTCACCG
ATTTACAAGAACTAGCGAAAAGCAATGGCATTGACGCCGTCTACATCGCGAGCCCTAACGCGGTTCACGCTGAACAAGCG
ATTTTGTTGATGAATCACGGCAAACATGTGTTGTGCGAAAAGCCGCTCGCCTCCAACGCGAAAGAAGTCGAAGCGATGAT
CGCAGCGGCCAAGCGAAATGGTGTCGTGCTGATGGAGGCGATGAAATCAACGCTCATGCCGAACTTTGCGGCCATCCGTC
AACACATACATAAACTCGGCCGCATCCGCCGCTACGCCGCGAACTATTGCCAATACTCGTCGCGTTATGATGCCTACAAA
CAAGGGACTGTGTTGAACGCCTTCAACCCCACTTTCTCGAACGGGGCGCTTATGGATCTTGGCGTCTACTGCCTGTACCC
GATGGTCACTTTGTTTGGTAAGCCCCGCAGCGTAAAAGCGCAAAGTGTGAAGCTCGAATCCGGCGTTGACGGCGAAGGAG
CGATCGTGTTGGATTATGGGGATATGGATGCGGTCGTCTTTTATTCCAAAATCACCAACTCACACTTGCCTTCAGAAATC
CAAGGCGAAGATGGAAACATGATCATTGACGCCATCCATACGCCAGCGAAAATCGAAATCCGCTACCGTGATGGGCGCGT
TGAGGACATCACCGTCCCACAAGATAAACCGCCGATGTATTATGAAGCCGAAGAATTTATCCGTTTAATTGAAAGCGGCA
AGCATGAATCAACAATCAACTCACATTGCCATTCGCTTTGGACGATGGAAATCATGGACGAAGCACGAAGACAAACCGGC
ATCGTCTTTCCTGCCGACCAGCGATAA

Upstream 100 bases:

>100_bases
GTATGAAAAATAGAGGAAAAAAAGCACATCGACGAAAACCAAATCTTCTCATTCGATTTATGGTACAATGATGGTCGATA
CCAACAAAGGGGGAAACAAC

Downstream 100 bases:

>100_bases
ACAAAAAAGTTCCAACCCGGTCCGTATAAGATTCGGTTGGAACTCTTTTTTATTTTAAAAACAGGCGTTCCTTCTGTTTC
ATTGGATTTCCGTAGTTGAC

Product: dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MVRFATIGTNWITEAFINAARLVDSFELAAVYSRTDETAKRFAEKVGAPRTFTDLQELAKSNGIDAVYIASPNAVHAEQA
ILLMNHGKHVLCEKPLASNAKEVEAMIAAAKRNGVVLMEAMKSTLMPNFAAIRQHIHKLGRIRRYAANYCQYSSRYDAYK
QGTVLNAFNPTFSNGALMDLGVYCLYPMVTLFGKPRSVKAQSVKLESGVDGEGAIVLDYGDMDAVVFYSKITNSHLPSEI
QGEDGNMIIDAIHTPAKIEIRYRDGRVEDITVPQDKPPMYYEAEEFIRLIESGKHESTINSHCHSLWTMEIMDEARRQTG
IVFPADQR

Sequences:

>Translated_328_residues
MVRFATIGTNWITEAFINAARLVDSFELAAVYSRTDETAKRFAEKVGAPRTFTDLQELAKSNGIDAVYIASPNAVHAEQA
ILLMNHGKHVLCEKPLASNAKEVEAMIAAAKRNGVVLMEAMKSTLMPNFAAIRQHIHKLGRIRRYAANYCQYSSRYDAYK
QGTVLNAFNPTFSNGALMDLGVYCLYPMVTLFGKPRSVKAQSVKLESGVDGEGAIVLDYGDMDAVVFYSKITNSHLPSEI
QGEDGNMIIDAIHTPAKIEIRYRDGRVEDITVPQDKPPMYYEAEEFIRLIESGKHESTINSHCHSLWTMEIMDEARRQTG
IVFPADQR
>Mature_328_residues
MVRFATIGTNWITEAFINAARLVDSFELAAVYSRTDETAKRFAEKVGAPRTFTDLQELAKSNGIDAVYIASPNAVHAEQA
ILLMNHGKHVLCEKPLASNAKEVEAMIAAAKRNGVVLMEAMKSTLMPNFAAIRQHIHKLGRIRRYAANYCQYSSRYDAYK
QGTVLNAFNPTFSNGALMDLGVYCLYPMVTLFGKPRSVKAQSVKLESGVDGEGAIVLDYGDMDAVVFYSKITNSHLPSEI
QGEDGNMIIDAIHTPAKIEIRYRDGRVEDITVPQDKPPMYYEAEEFIRLIESGKHESTINSHCHSLWTMEIMDEARRQTG
IVFPADQR

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=340, Percent_Identity=26.4705882352941, Blast_Score=120, Evalue=2e-27,
Organism=Escherichia coli, GI145693182, Length=326, Percent_Identity=47.5460122699387, Blast_Score=316, Evalue=1e-87,
Organism=Drosophila melanogaster, GI24581117, Length=343, Percent_Identity=30.0291545189504, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24584727, Length=294, Percent_Identity=28.5714285714286, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24581115, Length=336, Percent_Identity=25.8928571428571, Blast_Score=99, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36619; Mature: 36619

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRFATIGTNWITEAFINAARLVDSFELAAVYSRTDETAKRFAEKVGAPRTFTDLQELAK
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHH
SNGIDAVYIASPNAVHAEQAILLMNHGKHVLCEKPLASNAKEVEAMIAAAKRNGVVLMEA
CCCCCEEEEECCCCCCHHHEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEHHH
MKSTLMPNFAAIRQHIHKLGRIRRYAANYCQYSSRYDAYKQGTVLNAFNPTFSNGALMDL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEECCCCCCCCCCHHHH
GVYCLYPMVTLFGKPRSVKAQSVKLESGVDGEGAIVLDYGDMDAVVFYSKITNSHLPSEI
HHHHHHHHHHHHCCCCCCCHHEEEECCCCCCCCEEEEEECCCCEEEEEEHHHCCCCCCCC
QGEDGNMIIDAIHTPAKIEIRYRDGRVEDITVPQDKPPMYYEAEEFIRLIESGKHESTIN
CCCCCCEEEEEECCCEEEEEEEECCCEEEEECCCCCCCCEECHHHHHHHHHCCCCCHHHH
SHCHSLWTMEIMDEARRQTGIVFPADQR
HHHHHHHHHHHHHHHHHHCCCEECCCCC
>Mature Secondary Structure
MVRFATIGTNWITEAFINAARLVDSFELAAVYSRTDETAKRFAEKVGAPRTFTDLQELAK
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHH
SNGIDAVYIASPNAVHAEQAILLMNHGKHVLCEKPLASNAKEVEAMIAAAKRNGVVLMEA
CCCCCEEEEECCCCCCHHHEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEHHH
MKSTLMPNFAAIRQHIHKLGRIRRYAANYCQYSSRYDAYKQGTVLNAFNPTFSNGALMDL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEECCCCCCCCCCHHHH
GVYCLYPMVTLFGKPRSVKAQSVKLESGVDGEGAIVLDYGDMDAVVFYSKITNSHLPSEI
HHHHHHHHHHHHCCCCCCCHHEEEECCCCCCCCEEEEEECCCCEEEEEEHHHCCCCCCCC
QGEDGNMIIDAIHTPAKIEIRYRDGRVEDITVPQDKPPMYYEAEEFIRLIESGKHESTIN
CCCCCCEEEEEECCCEEEEEEEECCCEEEEECCCCCCCCEECHHHHHHHHHCCCCCHHHH
SHCHSLWTMEIMDEARRQTGIVFPADQR
HHHHHHHHHHHHHHHHHHCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]