Click here to switch to the map view.

The map label for this gene is ywpF [H]

Identifier: 138896748

GI number: 138896748

Start: 3211392

End: 3211832

Strand: Direct

Name: ywpF [H]

Synonym: GTNG_3111

Alternate gene names: 138896748

Gene position: 3211392-3211832 (Clockwise)

Preceding gene: 138896745

Following gene: 138896753

Centisome position: 90.45

GC content: 48.53

Gene sequence:

>441_bases
ATGAAAACGTTCAAGCTTGTCGGGCTCTCGGTCATTGATGAGGAAATGCGCCGCCAAGACATTCCGTTTATTGACGGCTT
GATCATTAATAAAGAGGATGGCCAAAACCGCTGGCTTGTTGAAGCGTATTTGGATGATGACTATGAGCCGATGTTTGCCA
GCTTGAAAGAACAACCCGAATTTCAGTTGCAAGTAACAATTACCAATCCTGGCAATGACCCGGCGAACATGCTTGTCGCC
GTCCGATCGATCACAAAAATGAACGGCCATATTAGCGTCCTCATGGAAGGACTGATGATCCCGAGGCGGACTCACTTGGC
TGAAGTCGTGCTGGCCGGCCTTGTCGAGAAAGGGCTGCAAGGTGAAGCACTGCTCAAAGAATTTCGCCAGCAAATGGACG
AACGTCATAGCGCAAGAACACGTAATGACCAGAAAAGATAA

Upstream 100 bases:

>100_bases
GGGGATAGCTTTTGCCACTGCAGTCGCATGATCCAGTTTTTCTTCCCATCGCTACCTATGCTATAATCATGGGTAAGACA
ACGGTAATGAGGTGGACGAT

Downstream 100 bases:

>100_bases
AAGGGAGATGACTGAAAAGGCCGCCTGTCCTCCATTGAAATAAACGAAGAAGCCGTTTCATGTGTATATAGTAAATAAAA
GAGGTGTCTCATGACTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MKTFKLVGLSVIDEEMRRQDIPFIDGLIINKEDGQNRWLVEAYLDDDYEPMFASLKEQPEFQLQVTITNPGNDPANMLVA
VRSITKMNGHISVLMEGLMIPRRTHLAEVVLAGLVEKGLQGEALLKEFRQQMDERHSARTRNDQKR

Sequences:

>Translated_146_residues
MKTFKLVGLSVIDEEMRRQDIPFIDGLIINKEDGQNRWLVEAYLDDDYEPMFASLKEQPEFQLQVTITNPGNDPANMLVA
VRSITKMNGHISVLMEGLMIPRRTHLAEVVLAGLVEKGLQGEALLKEFRQQMDERHSARTRNDQKR
>Mature_146_residues
MKTFKLVGLSVIDEEMRRQDIPFIDGLIINKEDGQNRWLVEAYLDDDYEPMFASLKEQPEFQLQVTITNPGNDPANMLVA
VRSITKMNGHISVLMEGLMIPRRTHLAEVVLAGLVEKGLQGEALLKEFRQQMDERHSARTRNDQKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16780; Mature: 16780

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFKLVGLSVIDEEMRRQDIPFIDGLIINKEDGQNRWLVEAYLDDDYEPMFASLKEQPE
CCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEECCCCCHHHHHHHCCCC
FQLQVTITNPGNDPANMLVAVRSITKMNGHISVLMEGLMIPRRTHLAEVVLAGLVEKGLQ
EEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
GEALLKEFRQQMDERHSARTRNDQKR
CHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKTFKLVGLSVIDEEMRRQDIPFIDGLIINKEDGQNRWLVEAYLDDDYEPMFASLKEQPE
CCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEECCCCCHHHHHHHCCCC
FQLQVTITNPGNDPANMLVAVRSITKMNGHISVLMEGLMIPRRTHLAEVVLAGLVEKGLQ
EEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
GEALLKEFRQQMDERHSARTRNDQKR
CHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]