| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is wcaK [C]
Identifier: 138896733
GI number: 138896733
Start: 3194463
End: 3195596
Strand: Direct
Name: wcaK [C]
Synonym: GTNG_3096
Alternate gene names: 138896733
Gene position: 3194463-3195596 (Clockwise)
Preceding gene: 138896726
Following gene: 138896734
Centisome position: 89.98
GC content: 48.94
Gene sequence:
>1134_bases ATGTCGTTGAAAATTGTCATCTCTGGCTTTTATGGACTTGGCAATACGGGAGATGAAGCCATTTTAGAAGCGATTATCGA CAATCTTCGAGCCGAATTGCCGAACCCGGATATTACTGTGTTTTCCCTGTCTCCCGAACAAACAGCGAAAGCGCATGGGG TGAAAAGCGTATACCGTGGATGGCGCCATGATAATAAAGGAAAAATTCGGGCGCTGCGCGAAGCCGATTTATTAATCAGC GGCGGTGGAGGGCTGCTTCAAGATACGTATCCAACACGCTTTTTGTTCGGTCCGCTTCCTTATTATTTATTAATTGTGTT TTTAGCGAAGTTGTGCGGGACGAAAGTCATGTTTTTCTCGCAAGGGATCGGACCGGTCAACACGACGTGGGGAAAGATTT TAATGAAAGTGTTTGCCAATATGGCTGATTTTATTACTGTCCGCGATGCGTATTCGAAACAGTTGCTTCACGAGCTAGGC GTGACAAGACCAGAGACGGTCGTCACCGCTGATATTGTCTTTGCTTTTCATCATAAGGAAGATAATGCTTGCCTTGAAAG CCTTCCGCTTCGTGGCGATGAACAGCTCGTCGCCGTATCGGTGCGTCCGTGGCTTGATCAACGCGACTATTATGGAAAAA TCGCCCGCGCGCTCGATCAGTTGATCGAACTCGAGGGCATTACGCCGGTCTTCGTGCCGATGGAAGGACATCATGATGTG CGTGCATCTGAGCGAGTCGTCGAACAAATGAATCATCGGTCCGCTTGTCATATTCTCGGCCCAGATTTTACACCGAACCA ATATTTACATTTTATTAGCCGTTGCCGTTTGACGATCGGCATGCGTTTGCATTCGCTCATTTTTTCGGCCTTGACAGGCG TCCCGCATATCGGTCTCAGTTATGACCCGAAAGTGGAGAGTTTGCTGAAGCGGTCCGGCATGTGGGACTATTCGTTCCGT CTGGAGGAGATCGACGTTGATCGGCTCGTGAACAACGCCCGGTATATGCTCGCTGAGCGTGAAGCCGTCAGTGCGGTTGT TCAAAACAACGCCAAGCAAATGCGTCAGGAGGCCATGGAAAACATTCGGCTGTTGAAAGAAAAATTTTTCCCGCAAGGAG AAGATCGCCGATGA
Upstream 100 bases:
>100_bases AACAAACCATCATCCATTTTGCATCATTGAATCTATAATAGGCAAATGCTACAATTAAGGTTGATTTTTGTGGAACGATG TTCGTTTAAGAGGAGGAGTT
Downstream 100 bases:
>100_bases ATATTTTGCTAGCAACTGTCTTTGACTATCCGCATGCCGGAGGGTTATCCACCCATGTAACCACATTGAAAGCTGGGCTT GAGGCACGGGGGCATCGTGT
Product: putative pyruvyl-transferase
Products: NA
Alternate protein names: Polysaccharide Pyruvyl Transferase CsaB; Pyruvyl-Transferase; Polysaccharide Pyruvyl Transferase Superfamily; CsaB Protein; Glycosyl Transferase WecB/TagA/CpsF Family; Polysaccharide Pyruvyl Transferase Family; Polysaccharide Pyruvyl-Transferase; Polysaccharide Pyruvyl Transferase Superfamily Protein; Polysaccharide Pyruvyl Transferase Family Protein; Polysaccharide Pyruvyl Transferase Csab; WecB/TagA/CpsF Family Glycosyl Transferase
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MSLKIVISGFYGLGNTGDEAILEAIIDNLRAELPNPDITVFSLSPEQTAKAHGVKSVYRGWRHDNKGKIRALREADLLIS GGGGLLQDTYPTRFLFGPLPYYLLIVFLAKLCGTKVMFFSQGIGPVNTTWGKILMKVFANMADFITVRDAYSKQLLHELG VTRPETVVTADIVFAFHHKEDNACLESLPLRGDEQLVAVSVRPWLDQRDYYGKIARALDQLIELEGITPVFVPMEGHHDV RASERVVEQMNHRSACHILGPDFTPNQYLHFISRCRLTIGMRLHSLIFSALTGVPHIGLSYDPKVESLLKRSGMWDYSFR LEEIDVDRLVNNARYMLAEREAVSAVVQNNAKQMRQEAMENIRLLKEKFFPQGEDRR
Sequences:
>Translated_377_residues MSLKIVISGFYGLGNTGDEAILEAIIDNLRAELPNPDITVFSLSPEQTAKAHGVKSVYRGWRHDNKGKIRALREADLLIS GGGGLLQDTYPTRFLFGPLPYYLLIVFLAKLCGTKVMFFSQGIGPVNTTWGKILMKVFANMADFITVRDAYSKQLLHELG VTRPETVVTADIVFAFHHKEDNACLESLPLRGDEQLVAVSVRPWLDQRDYYGKIARALDQLIELEGITPVFVPMEGHHDV RASERVVEQMNHRSACHILGPDFTPNQYLHFISRCRLTIGMRLHSLIFSALTGVPHIGLSYDPKVESLLKRSGMWDYSFR LEEIDVDRLVNNARYMLAEREAVSAVVQNNAKQMRQEAMENIRLLKEKFFPQGEDRR >Mature_376_residues SLKIVISGFYGLGNTGDEAILEAIIDNLRAELPNPDITVFSLSPEQTAKAHGVKSVYRGWRHDNKGKIRALREADLLISG GGGLLQDTYPTRFLFGPLPYYLLIVFLAKLCGTKVMFFSQGIGPVNTTWGKILMKVFANMADFITVRDAYSKQLLHELGV TRPETVVTADIVFAFHHKEDNACLESLPLRGDEQLVAVSVRPWLDQRDYYGKIARALDQLIELEGITPVFVPMEGHHDVR ASERVVEQMNHRSACHILGPDFTPNQYLHFISRCRLTIGMRLHSLIFSALTGVPHIGLSYDPKVESLLKRSGMWDYSFRL EEIDVDRLVNNARYMLAEREAVSAVVQNNAKQMRQEAMENIRLLKEKFFPQGEDRR
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG2327
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.-.-.- [C]
Molecular weight: Translated: 42690; Mature: 42559
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKIVISGFYGLGNTGDEAILEAIIDNLRAELPNPDITVFSLSPEQTAKAHGVKSVYRG CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHH WRHDNKGKIRALREADLLISGGGGLLQDTYPTRFLFGPLPYYLLIVFLAKLCGTKVMFFS HCCCCCCCEEEEEECCEEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCEEEEHH QGIGPVNTTWGKILMKVFANMADFITVRDAYSKQLLHELGVTRPETVVTADIVFAFHHKE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCC DNACLESLPLRGDEQLVAVSVRPWLDQRDYYGKIARALDQLIELEGITPVFVPMEGHHDV CCHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC RASERVVEQMNHRSACHILGPDFTPNQYLHFISRCRLTIGMRLHSLIFSALTGVPHIGLS HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC YDPKVESLLKRSGMWDYSFRLEEIDVDRLVNNARYMLAEREAVSAVVQNNAKQMRQEAME CCHHHHHHHHHCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIRLLKEKFFPQGEDRR HHHHHHHHCCCCCCCCC >Mature Secondary Structure SLKIVISGFYGLGNTGDEAILEAIIDNLRAELPNPDITVFSLSPEQTAKAHGVKSVYRG CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHH WRHDNKGKIRALREADLLISGGGGLLQDTYPTRFLFGPLPYYLLIVFLAKLCGTKVMFFS HCCCCCCCEEEEEECCEEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCEEEEHH QGIGPVNTTWGKILMKVFANMADFITVRDAYSKQLLHELGVTRPETVVTADIVFAFHHKE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCC DNACLESLPLRGDEQLVAVSVRPWLDQRDYYGKIARALDQLIELEGITPVFVPMEGHHDV CCHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC RASERVVEQMNHRSACHILGPDFTPNQYLHFISRCRLTIGMRLHSLIFSALTGVPHIGLS HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC YDPKVESLLKRSGMWDYSFRLEEIDVDRLVNNARYMLAEREAVSAVVQNNAKQMRQEAME CCHHHHHHHHHCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIRLLKEKFFPQGEDRR HHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA