Click here to switch to the map view.

The map label for this gene is sbsB [H]

Identifier: 138896728

GI number: 138896728

Start: 3186726

End: 3189332

Strand: Reverse

Name: sbsB [H]

Synonym: GTNG_3091

Alternate gene names: 138896728

Gene position: 3189332-3186726 (Counterclockwise)

Preceding gene: 138896729

Following gene: 138896727

Centisome position: 89.83

GC content: 37.44

Gene sequence:

>2607_bases
ATGGCTTATCAACCTAAGTCCTATCGCAAATTTGCTGCAACGACAGCAACAGCAGCCATGGTTGCATCTGCGGTAGCCCC
TGTTGCTTCTTTAGCTGCAGGATTTACTGACGTTGCGCCGCAATACAAAGATGCGGTCGATTTCTTAGTATCGACAGGTG
CAACAAACGGTAAAACAGAAACGCAATTCGGCGTTTACGAACAAATCACTCGCTTGGATGCAGCGGTCATCTTGGCGAAA
GTATTGAAACTTGATGTAGAAAACGCAAAAGACGCTGGTTTCACGGATGTACCGAAAGACCGTGCAAAATACGTCAACGC
GTTGGTTGAAGCGGGCATCTTGAACGGAAAAGGCAATGGTAAATTTGGTGCATATGACAACCTGACTCGTGTCGAAATGG
CGAAAATCATTGCCAACGCTTATAAATTAGAAAAACAAAACGACAACGCGCTTCCGTTCACGGACGTCAACGCAACGTGG
GCTCCGTTCGTTAAAGCGCTCTATGACAATGGCGTAGCGAAAGGTAAAACGGAAACAAGCTTCAACGCTTACGCAGATAT
CACGCGCGGTGAATTTGCGCTGTTGGTATATCGTGCGGCGAACTTGAATGTGGCTCCGGAAGTTGTATCGGTAAGTGCGA
TTAACTCTACACAAGCGGTTGTAACTTTCAAAGGTGAAATTGGTGAAGCTACAGCTACTAACTTCACAGTTGATAACGGA
TTAACAGTGGTTAAGGCAGAAATTAACCCTGATAATAAAAAAGAAGTTAAATTAACTTTCAACCAAGAATTTACAGATAA
AGAAACTTACAAAATTACTGTGAATGGTGTAAAATCTGCTGCTGGTGTTGAATTAAAAGAAGCAACTACAGTAGAGTTTA
CTTATGAAATTGGTGAAGTTAGCAAAATTGAATTAACAAAAACTACATTTGTTCCAGGCGAAGACATTGCTGACTTTGTA
AAACTAGTAAATGCTAACGGTGTTGATGTAACTGATAAATATACTGTAGAAATTTCTTCTACTTCATCAAAAGTTAGTAC
AACTGCTGGAACAGTTGGTTCTGTTTCTACAAGTGAAACTGCCTATGTACAAGTCACAGTTAAATCTGGTACTACTGTAG
TTAAGCAAAGCGATGCAATTAAGGTTACTTTAGCACCAACTGCTATAACATCACTTGTTGGTTTTGGATTAGGTGATGAT
GTAGATAATGTATCTGCTTATAAACAAGCAGTAAAAGATGGGAAACTAACTTCTGAAATGAAAAAATCAGAAACTCCTAA
CTTGGAGCTTCTAGTAAAAGATAATAATGGTTCTGAGAAAGTATTATCTGCTAGCGATGTAACAAAAATTGAAAACTTAA
CTCCAACTGTTGCTACTGTGTCTGTTGTTGGTGACGAGTTAGTTGTTAATGCTTATTCTACTGGTACTGCGCAAGTTAAG
TTAACAATTGGTGGCTTTGTAACTACTGTTAGCTTTACAGTTAAAGCAGATTCTACAATTACAAATGCAAATTTAAGTAA
ATCCAATGTTTACTTCAATACTGCATTAAATTCTGGCGAGACTGATTCTGTAAATGTCAACATCGTTGACCAATATGGTG
AAAAAATCCAAGCAACAGTTACATCTAACGCTGTGTTTGTTGGAGGAACTAAAGTTGGTACATTAACTGCCAAATCTAGC
AATACAAATGTTGCTACAGTTACAGTAAATGATGTTGCTTCAGCATCTTCTTCTCTTCCAATAACAATCACTGAAGTTGG
AAAAGGAACTGCAACAATTACAGTAGAGTTTAAAGATACTAAAGGTAACGTAGTATTTACAAAAACTTTAACTGTAACAG
GTAAAGATGCTGGCGCATTCGCTGGTTATGTAATTGAAACAGATGCTACAGAAATTGATTTGGACAAAGATGTTGCTCCT
GAAACAAATGATGATGCAGTAAACTTTGCAGTTTACGAAGTTGATGCTCAAGGAAACAAAATTCAGGCTGTAACATCTGG
CGTTACTTTAGAGATTCAAGGTTATGACAAAAACCCTGAAGTGAAAAATTATATTAATGTCGTTGGTCAGTCAGTAGCTG
TTGTAAATGCAAATGCATACAAAGCTTTTGCTGGCTCTGGAACATTAAATGTAGATGTTAAAGTAAATAATACAAAGATT
GGTACTAAAACAATCGCTTATAAAAATACTGATCCTGTAGCTACAAAAGCGGTTATCAATACTGCAGATATCGTTATTGA
TAACGATAAAATTAATGGTTCTGCAGATCAACCATTAACACTTACAGAGCTATTCTATGGACACTATGATGCAGTTGCTG
GTAAATATACAATTGAGCCGAAGTTATCTATACTAGACCAAGCATCTAAAGCAATTGATTGGGATACAGCGGCTGCTCCT
GGAACTTTAGTGAATACAGACACAATATCAAATATTGCATTTATAACAACAAATGAATCTAACGTAACTATTTCAGCTGG
TACAGTGACTTTAAAACCAGGAAAAACATCTGGTTCGTTTACAGTAGTAGTTTCTGATGTAGATACTACAGCTGTATCAG
ATATCTTACCTGCTCCTGTAGCATTCAAAGTAACAATTGTTGACTAA

Upstream 100 bases:

>100_bases
TCTCGTTAGCTAATCGAACGGCACAGGCATGCTAATTATCCTGATGCCTTCGATTCACTATAAAAATAAAAATATATGCA
AAACGGGGAGGAAATCATTC

Downstream 100 bases:

>100_bases
TTAATATGCTTAAGGACGGTGCTTGTCACCGCCAGAAAATGCCGAAAAGCTCTGCGGAGAGAAATTTCTGCGGGGCTTTT
CTTTTTCCTTTCTTCAATTA

Product: SbsB

Products: NA

Alternate protein names: Surface array protein; Surface layer protein [H]

Number of amino acids: Translated: 868; Mature: 867

Protein sequence:

>868_residues
MAYQPKSYRKFAATTATAAMVASAVAPVASLAAGFTDVAPQYKDAVDFLVSTGATNGKTETQFGVYEQITRLDAAVILAK
VLKLDVENAKDAGFTDVPKDRAKYVNALVEAGILNGKGNGKFGAYDNLTRVEMAKIIANAYKLEKQNDNALPFTDVNATW
APFVKALYDNGVAKGKTETSFNAYADITRGEFALLVYRAANLNVAPEVVSVSAINSTQAVVTFKGEIGEATATNFTVDNG
LTVVKAEINPDNKKEVKLTFNQEFTDKETYKITVNGVKSAAGVELKEATTVEFTYEIGEVSKIELTKTTFVPGEDIADFV
KLVNANGVDVTDKYTVEISSTSSKVSTTAGTVGSVSTSETAYVQVTVKSGTTVVKQSDAIKVTLAPTAITSLVGFGLGDD
VDNVSAYKQAVKDGKLTSEMKKSETPNLELLVKDNNGSEKVLSASDVTKIENLTPTVATVSVVGDELVVNAYSTGTAQVK
LTIGGFVTTVSFTVKADSTITNANLSKSNVYFNTALNSGETDSVNVNIVDQYGEKIQATVTSNAVFVGGTKVGTLTAKSS
NTNVATVTVNDVASASSSLPITITEVGKGTATITVEFKDTKGNVVFTKTLTVTGKDAGAFAGYVIETDATEIDLDKDVAP
ETNDDAVNFAVYEVDAQGNKIQAVTSGVTLEIQGYDKNPEVKNYINVVGQSVAVVNANAYKAFAGSGTLNVDVKVNNTKI
GTKTIAYKNTDPVATKAVINTADIVIDNDKINGSADQPLTLTELFYGHYDAVAGKYTIEPKLSILDQASKAIDWDTAAAP
GTLVNTDTISNIAFITTNESNVTISAGTVTLKPGKTSGSFTVVVSDVDTTAVSDILPAPVAFKVTIVD

Sequences:

>Translated_868_residues
MAYQPKSYRKFAATTATAAMVASAVAPVASLAAGFTDVAPQYKDAVDFLVSTGATNGKTETQFGVYEQITRLDAAVILAK
VLKLDVENAKDAGFTDVPKDRAKYVNALVEAGILNGKGNGKFGAYDNLTRVEMAKIIANAYKLEKQNDNALPFTDVNATW
APFVKALYDNGVAKGKTETSFNAYADITRGEFALLVYRAANLNVAPEVVSVSAINSTQAVVTFKGEIGEATATNFTVDNG
LTVVKAEINPDNKKEVKLTFNQEFTDKETYKITVNGVKSAAGVELKEATTVEFTYEIGEVSKIELTKTTFVPGEDIADFV
KLVNANGVDVTDKYTVEISSTSSKVSTTAGTVGSVSTSETAYVQVTVKSGTTVVKQSDAIKVTLAPTAITSLVGFGLGDD
VDNVSAYKQAVKDGKLTSEMKKSETPNLELLVKDNNGSEKVLSASDVTKIENLTPTVATVSVVGDELVVNAYSTGTAQVK
LTIGGFVTTVSFTVKADSTITNANLSKSNVYFNTALNSGETDSVNVNIVDQYGEKIQATVTSNAVFVGGTKVGTLTAKSS
NTNVATVTVNDVASASSSLPITITEVGKGTATITVEFKDTKGNVVFTKTLTVTGKDAGAFAGYVIETDATEIDLDKDVAP
ETNDDAVNFAVYEVDAQGNKIQAVTSGVTLEIQGYDKNPEVKNYINVVGQSVAVVNANAYKAFAGSGTLNVDVKVNNTKI
GTKTIAYKNTDPVATKAVINTADIVIDNDKINGSADQPLTLTELFYGHYDAVAGKYTIEPKLSILDQASKAIDWDTAAAP
GTLVNTDTISNIAFITTNESNVTISAGTVTLKPGKTSGSFTVVVSDVDTTAVSDILPAPVAFKVTIVD
>Mature_867_residues
AYQPKSYRKFAATTATAAMVASAVAPVASLAAGFTDVAPQYKDAVDFLVSTGATNGKTETQFGVYEQITRLDAAVILAKV
LKLDVENAKDAGFTDVPKDRAKYVNALVEAGILNGKGNGKFGAYDNLTRVEMAKIIANAYKLEKQNDNALPFTDVNATWA
PFVKALYDNGVAKGKTETSFNAYADITRGEFALLVYRAANLNVAPEVVSVSAINSTQAVVTFKGEIGEATATNFTVDNGL
TVVKAEINPDNKKEVKLTFNQEFTDKETYKITVNGVKSAAGVELKEATTVEFTYEIGEVSKIELTKTTFVPGEDIADFVK
LVNANGVDVTDKYTVEISSTSSKVSTTAGTVGSVSTSETAYVQVTVKSGTTVVKQSDAIKVTLAPTAITSLVGFGLGDDV
DNVSAYKQAVKDGKLTSEMKKSETPNLELLVKDNNGSEKVLSASDVTKIENLTPTVATVSVVGDELVVNAYSTGTAQVKL
TIGGFVTTVSFTVKADSTITNANLSKSNVYFNTALNSGETDSVNVNIVDQYGEKIQATVTSNAVFVGGTKVGTLTAKSSN
TNVATVTVNDVASASSSLPITITEVGKGTATITVEFKDTKGNVVFTKTLTVTGKDAGAFAGYVIETDATEIDLDKDVAPE
TNDDAVNFAVYEVDAQGNKIQAVTSGVTLEIQGYDKNPEVKNYINVVGQSVAVVNANAYKAFAGSGTLNVDVKVNNTKIG
TKTIAYKNTDPVATKAVINTADIVIDNDKINGSADQPLTLTELFYGHYDAVAGKYTIEPKLSILDQASKAIDWDTAAAPG
TLVNTDTISNIAFITTNESNVTISAGTVTLKPGKTSGSFTVVVSDVDTTAVSDILPAPVAFKVTIVD

Specific function: The S-layer is a paracrystalline mono-layered assembly of proteins which coat the surface of bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 SLH (S-layer homology) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003343
- InterPro:   IPR008964
- InterPro:   IPR001119 [H]

Pfam domain/function: PF02368 Big_2; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 91186; Mature: 91054

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYQPKSYRKFAATTATAAMVASAVAPVASLAAGFTDVAPQYKDAVDFLVSTGATNGKTE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCCCCCCC
TQFGVYEQITRLDAAVILAKVLKLDVENAKDAGFTDVPKDRAKYVNALVEAGILNGKGNG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCEECCCCCC
KFGAYDNLTRVEMAKIIANAYKLEKQNDNALPFTDVNATWAPFVKALYDNGVAKGKTETS
CCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCC
FNAYADITRGEFALLVYRAANLNVAPEVVSVSAINSTQAVVTFKGEIGEATATNFTVDNG
CCEEEECCCCCEEEEEEEECCCCCCCCEEEEEEECCCEEEEEEECCCCCCEECEEEECCC
LTVVKAEINPDNKKEVKLTFNQEFTDKETYKITVNGVKSAAGVELKEATTVEFTYEIGEV
EEEEEEECCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEECCEEEEEEEECCCE
SKIELTKTTFVPGEDIADFVKLVNANGVDVTDKYTVEISSTSSKVSTTAGTVGSVSTSET
EEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCE
AYVQVTVKSGTTVVKQSDAIKVTLAPTAITSLVGFGLGDDVDNVSAYKQAVKDGKLTSEM
EEEEEEEECCCEEEECCCEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHH
KKSETPNLELLVKDNNGSEKVLSASDVTKIENLTPTVATVSVVGDELVVNAYSTGTAQVK
HHCCCCCEEEEEECCCCCCEEEECCCCHHHHCCCCCEEEEEEECCEEEEEEECCCEEEEE
LTIGGFVTTVSFTVKADSTITNANLSKSNVYFNTALNSGETDSVNVNIVDQYGEKIQATV
EEECEEEEEEEEEEEECCEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEE
TSNAVFVGGTKVGTLTAKSSNTNVATVTVNDVASASSSLPITITEVGKGTATITVEFKDT
ECCEEEECCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEEEECC
KGNVVFTKTLTVTGKDAGAFAGYVIETDATEIDLDKDVAPETNDDAVNFAVYEVDAQGNK
CCCEEEEEEEEEECCCCCCEEEEEEECCCCEEECCCCCCCCCCCCEEEEEEEEEECCCCE
IQAVTSGVTLEIQGYDKNPEVKNYINVVGQSVAVVNANAYKAFAGSGTLNVDVKVNNTKI
EEEEECCEEEEEECCCCCCCHHHHHHHHCCEEEEEECCCEEEEECCCEEEEEEEECCEEE
GTKTIAYKNTDPVATKAVINTADIVIDNDKINGSADQPLTLTELFYGHYDAVAGKYTIEP
CCEEEEECCCCCCEEEEEEEEEEEEEECCCCCCCCCCCEEHHHHHHCCHHHHCCEEEECC
KLSILDQASKAIDWDTAAAPGTLVNTDTISNIAFITTNESNVTISAGTVTLKPGKTSGSF
CHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEECCCCEEEEECEEEECCCCCCCEE
TVVVSDVDTTAVSDILPAPVAFKVTIVD
EEEEECCCCHHHHHHCCCCEEEEEEEEC
>Mature Secondary Structure 
AYQPKSYRKFAATTATAAMVASAVAPVASLAAGFTDVAPQYKDAVDFLVSTGATNGKTE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCCCCCCC
TQFGVYEQITRLDAAVILAKVLKLDVENAKDAGFTDVPKDRAKYVNALVEAGILNGKGNG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCEECCCCCC
KFGAYDNLTRVEMAKIIANAYKLEKQNDNALPFTDVNATWAPFVKALYDNGVAKGKTETS
CCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCC
FNAYADITRGEFALLVYRAANLNVAPEVVSVSAINSTQAVVTFKGEIGEATATNFTVDNG
CCEEEECCCCCEEEEEEEECCCCCCCCEEEEEEECCCEEEEEEECCCCCCEECEEEECCC
LTVVKAEINPDNKKEVKLTFNQEFTDKETYKITVNGVKSAAGVELKEATTVEFTYEIGEV
EEEEEEECCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEECCEEEEEEEECCCE
SKIELTKTTFVPGEDIADFVKLVNANGVDVTDKYTVEISSTSSKVSTTAGTVGSVSTSET
EEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCE
AYVQVTVKSGTTVVKQSDAIKVTLAPTAITSLVGFGLGDDVDNVSAYKQAVKDGKLTSEM
EEEEEEEECCCEEEECCCEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHH
KKSETPNLELLVKDNNGSEKVLSASDVTKIENLTPTVATVSVVGDELVVNAYSTGTAQVK
HHCCCCCEEEEEECCCCCCEEEECCCCHHHHCCCCCEEEEEEECCEEEEEEECCCEEEEE
LTIGGFVTTVSFTVKADSTITNANLSKSNVYFNTALNSGETDSVNVNIVDQYGEKIQATV
EEECEEEEEEEEEEEECCEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEE
TSNAVFVGGTKVGTLTAKSSNTNVATVTVNDVASASSSLPITITEVGKGTATITVEFKDT
ECCEEEECCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEEEECC
KGNVVFTKTLTVTGKDAGAFAGYVIETDATEIDLDKDVAPETNDDAVNFAVYEVDAQGNK
CCCEEEEEEEEEECCCCCCEEEEEEECCCCEEECCCCCCCCCCCCEEEEEEEEEECCCCE
IQAVTSGVTLEIQGYDKNPEVKNYINVVGQSVAVVNANAYKAFAGSGTLNVDVKVNNTKI
EEEEECCEEEEEECCCCCCCHHHHHHHHCCEEEEEECCCEEEEECCCEEEEEEEECCEEE
GTKTIAYKNTDPVATKAVINTADIVIDNDKINGSADQPLTLTELFYGHYDAVAGKYTIEP
CCEEEEECCCCCCEEEEEEEEEEEEEECCCCCCCCCCCEEHHHHHHCCHHHHCCEEEECC
KLSILDQASKAIDWDTAAAPGTLVNTDTISNIAFITTNESNVTISAGTVTLKPGKTSGSF
CHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEECCCCEEEEECEEEECCCCCCCEE
TVVVSDVDTTAVSDILPAPVAFKVTIVD
EEEEECCCCHHHHHHCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7836294; 12721629 [H]