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The map label for this gene is yadE [H]

Identifier: 138896723

GI number: 138896723

Start: 3182277

End: 3183485

Strand: Reverse

Name: yadE [H]

Synonym: GTNG_3086

Alternate gene names: 138896723

Gene position: 3183485-3182277 (Counterclockwise)

Preceding gene: 138896727

Following gene: 138896718

Centisome position: 89.67

GC content: 44.67

Gene sequence:

>1209_bases
ATGAAATGGAGGGGTGTATCATTGAAGTATCGGATCTTTTGGCTCGCTTTTTTCCTTCTTCTGTTTTTTGGATGGGAAAA
AAGTGGGCAAGCAGAGACTAAGGTCCCGTTATTTATTCAATCAAAAGGAGCATCGGCGCCAGTATACGCCTATGTGGCGA
ATGATATGCAAAAAGTCGGAACGATTTATAGCGGCAGGGTATTTGAAGTCGTTGATGAAAATAAACATTATTTTTTCATC
CGATACGGGTTTGTCAAAGGGATGGTCAAAAAGGACGAAGCGAAGCTTGGGCGCCCGTATGCTTTCACCCGCGAACCGGA
TCGGCTGCCCAAAAGTGTGATTACGAAGAAAGAGGTACAAGTGTATATTTTTCAAAAAGGAAATAAGCAGGCGATCGGTT
CCATTCAGTCTGGAGTCCGTTATCCGATCAAAGCCGAGACCGCCCTATTTTATTTGATTGAATTCGGCGGAAGAGACGGA
TACATTTACAAGCATGTAACTGAAAGTGATCACGGTGTGCCGGTGTTGTTGTACCATCATATATTAGATGATTTCGATGA
GCCACTGTTTCGTTCAACAACAACAGTTCCGTTCAGCCAGTTTTTCAAAGAAATGACATACTTAAAAGAGAACGGCTATA
CGGCGATTACCCCGGATATGTTGCTTGCCTATGTACGAAATGAGCAATTGCTGCCGCCGAAGTCGGTGCTCATTACGTTT
GATGACGGATTGAAGTCAACATACATATACGCGTACCCATTGCTCAAGCGGTACGGCTTTCGGGCAACCGTGTTTATGAT
TACAGGAAGAATGCGCCCGGCTCCACAGCCGTTCGACCCGACAGGCTTACAGTTTTTAAGCAAACAAGAAATCGCCCAAA
TGCGTGATATTATGACGTTTGAAAGCCATACGAACCATTTTCACTTGTCGGATCAGGAATATGGCCCGTATTTGCTGTTT
AAGCCATATGAAGACGTGATGGCTGATTTATTGGCGAGTAAAGAAAAAATTGGGGCGACGGCCATCGCTTATCCGTTTGG
TGCCTATAATCAACGGGTCATTGGTATGGTAAAACAAGCTGGGTTTACCATGGCGTTTACGACGAAAAAAGGGACCGTTT
ATCCTGGAGATCCAGCGTTTGAGTTAAAACGGCAATGGGTGTATCCACGGATTTCGCTTCGTCAGTTTGAACAGTTATTG
CGGCCGTAA

Upstream 100 bases:

>100_bases
CCATATGTCACGATTGGACATTTTTTGATAGATTGGTTTTTTAGAGAAAAGTTTAGTAGTAAAATAATAGGGTCATAGTC
ATATCTGGGTAGAAATAACA

Downstream 100 bases:

>100_bases
TCAAAAGCCGCTTCTTCCGTTTTCACGGAGAAGCGGCTTTTTTGCGGCTTGGACGCCATGCGATTGAGGAGAGAAACAGC
CCAATCAATAAAAACAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MKWRGVSLKYRIFWLAFFLLLFFGWEKSGQAETKVPLFIQSKGASAPVYAYVANDMQKVGTIYSGRVFEVVDENKHYFFI
RYGFVKGMVKKDEAKLGRPYAFTREPDRLPKSVITKKEVQVYIFQKGNKQAIGSIQSGVRYPIKAETALFYLIEFGGRDG
YIYKHVTESDHGVPVLLYHHILDDFDEPLFRSTTTVPFSQFFKEMTYLKENGYTAITPDMLLAYVRNEQLLPPKSVLITF
DDGLKSTYIYAYPLLKRYGFRATVFMITGRMRPAPQPFDPTGLQFLSKQEIAQMRDIMTFESHTNHFHLSDQEYGPYLLF
KPYEDVMADLLASKEKIGATAIAYPFGAYNQRVIGMVKQAGFTMAFTTKKGTVYPGDPAFELKRQWVYPRISLRQFEQLL
RP

Sequences:

>Translated_402_residues
MKWRGVSLKYRIFWLAFFLLLFFGWEKSGQAETKVPLFIQSKGASAPVYAYVANDMQKVGTIYSGRVFEVVDENKHYFFI
RYGFVKGMVKKDEAKLGRPYAFTREPDRLPKSVITKKEVQVYIFQKGNKQAIGSIQSGVRYPIKAETALFYLIEFGGRDG
YIYKHVTESDHGVPVLLYHHILDDFDEPLFRSTTTVPFSQFFKEMTYLKENGYTAITPDMLLAYVRNEQLLPPKSVLITF
DDGLKSTYIYAYPLLKRYGFRATVFMITGRMRPAPQPFDPTGLQFLSKQEIAQMRDIMTFESHTNHFHLSDQEYGPYLLF
KPYEDVMADLLASKEKIGATAIAYPFGAYNQRVIGMVKQAGFTMAFTTKKGTVYPGDPAFELKRQWVYPRISLRQFEQLL
RP
>Mature_402_residues
MKWRGVSLKYRIFWLAFFLLLFFGWEKSGQAETKVPLFIQSKGASAPVYAYVANDMQKVGTIYSGRVFEVVDENKHYFFI
RYGFVKGMVKKDEAKLGRPYAFTREPDRLPKSVITKKEVQVYIFQKGNKQAIGSIQSGVRYPIKAETALFYLIEFGGRDG
YIYKHVTESDHGVPVLLYHHILDDFDEPLFRSTTTVPFSQFFKEMTYLKENGYTAITPDMLLAYVRNEQLLPPKSVLITF
DDGLKSTYIYAYPLLKRYGFRATVFMITGRMRPAPQPFDPTGLQFLSKQEIAQMRDIMTFESHTNHFHLSDQEYGPYLLF
KPYEDVMADLLASKEKIGATAIAYPFGAYNQRVIGMVKQAGFTMAFTTKKGTVYPGDPAFELKRQWVYPRISLRQFEQLL
RP

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786322, Length=403, Percent_Identity=32.258064516129, Blast_Score=213, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 46504; Mature: 46504

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWRGVSLKYRIFWLAFFLLLFFGWEKSGQAETKVPLFIQSKGASAPVYAYVANDMQKVG
CCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEHHHHHHHH
TIYSGRVFEVVDENKHYFFIRYGFVKGMVKKDEAKLGRPYAFTREPDRLPKSVITKKEVQ
HHHCCEEEEEEECCCCEEEEEEHHHHCHHHCCHHHCCCCEEECCCHHHCCHHHHCCCEEE
VYIFQKGNKQAIGSIQSGVRYPIKAETALFYLIEFGGRDGYIYKHVTESDHGVPVLLYHH
EEEEECCCHHHHHHHHCCCCCCEECCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEHHH
ILDDFDEPLFRSTTTVPFSQFFKEMTYLKENGYTAITPDMLLAYVRNEQLLPPKSVLITF
HHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCCCEEECHHHHHHHHCCCCCCCCCEEEEEE
DDGLKSTYIYAYPLLKRYGFRATVFMITGRMRPAPQPFDPTGLQFLSKQEIAQMRDIMTF
CCCCCCCEEEEEHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ESHTNHFHLSDQEYGPYLLFKPYEDVMADLLASKEKIGATAIAYPFGAYNQRVIGMVKQA
HCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHC
GFTMAFTTKKGTVYPGDPAFELKRQWVYPRISLRQFEQLLRP
CEEEEEEECCCEECCCCCHHHHHHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKWRGVSLKYRIFWLAFFLLLFFGWEKSGQAETKVPLFIQSKGASAPVYAYVANDMQKVG
CCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEHHHHHHHH
TIYSGRVFEVVDENKHYFFIRYGFVKGMVKKDEAKLGRPYAFTREPDRLPKSVITKKEVQ
HHHCCEEEEEEECCCCEEEEEEHHHHCHHHCCHHHCCCCEEECCCHHHCCHHHHCCCEEE
VYIFQKGNKQAIGSIQSGVRYPIKAETALFYLIEFGGRDGYIYKHVTESDHGVPVLLYHH
EEEEECCCHHHHHHHHCCCCCCEECCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEHHH
ILDDFDEPLFRSTTTVPFSQFFKEMTYLKENGYTAITPDMLLAYVRNEQLLPPKSVLITF
HHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCCCEEECHHHHHHHHCCCCCCCCCEEEEEE
DDGLKSTYIYAYPLLKRYGFRATVFMITGRMRPAPQPFDPTGLQFLSKQEIAQMRDIMTF
CCCCCCCEEEEEHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ESHTNHFHLSDQEYGPYLLFKPYEDVMADLLASKEKIGATAIAYPFGAYNQRVIGMVKQA
HCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHC
GFTMAFTTKKGTVYPGDPAFELKRQWVYPRISLRQFEQLLRP
CEEEEEEECCCEECCCCCHHHHHHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]