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The map label for this gene is fliD [H]

Identifier: 138896691

GI number: 138896691

Start: 3151203

End: 3152690

Strand: Reverse

Name: fliD [H]

Synonym: GTNG_3054

Alternate gene names: 138896691

Gene position: 3152690-3151203 (Counterclockwise)

Preceding gene: 138896692

Following gene: 138896690

Centisome position: 88.8

GC content: 51.28

Gene sequence:

>1488_bases
TTGCGCATTAGCGGTTTGGCGAGCGGAATGGATATTGACCAAATCGTCAAAGATTTGATGAGAGCGGAGCGGATGCCGCT
GGATAAGCTGTATCAAAAAAAGCAGCTGCTTGAGTGGCAGCGTGATGATTACCGGGCGATGAACACGCTGTTGCAAGGGT
TGGATGACTACTTGTTCAGCAACATCACCCTCCAAAGCAGCATGCTCAAAAAAACCATCTCGAGCTCGAATGAAGCGGTC
GTGACAGCGACAGCAAGCGCCAGCGCGGCGAATGTGGCGACGACGATTCAAGTCGATCAGGTGGCAACGTCAGCCGTTTG
GTTATCCAATGTGAGTGTGCGCAAGGACGATTTTTCCGTTGATGCTGATACGACGTTGACGATCAAAGTGACGAACGGCG
ATGGCAGCACGAACACAGTGGAAATAACGGTGAAACAAGGAACAACGTTGGACGGATTGATCGCCCAATTGAACAGCAAT
GCCAATCTTGGCGTCAGCGCGTTTTACGATGAACAAACCGGACGGATTTCGATTATGAAGAAAGAGACAGGAGCGCAGGC
CAGTTTGGTGCTGGATGACGAAGAGACGGCCAACTTTTTCGCGCAAAAACTGGGGTTTACAGGAGCAGCGGCAGAGCAGG
AGCTCACTGGAAAAACCGAAGGACAGGATGCGCAAGTGACGATTAACGGCTTAAAGACTAGCCGTTCGTCAAACACGTTC
ACGATTAATGGTGTGACGTATACGGTCAAAGGGACGGGGACGGCGACGGTTTCGGTGGAGACCGATGTCGATGCGATGGT
GAACGTGATTAAAGGATTTGTCGATAAATACAATGAAGTGGTCGCCAAAATCAACGCCGAGCTGAAAGAGGAGCGCTACC
GGAGCTATCCGCCGCTCACTGACGAGCAAAAAGAAGCGATGACGGAAAAGCAAATTGAGCTGTGGGAAGAAAAAGCGCGA
AGCGGGATGCTTCGCGGCGATTCGATTTTATCAAGCGCCCTTAGCCAAATGCGGATGGATGTGTACACGAAAGTGGAAGG
AGCGAACATCCCGAGCGGGCTTTCGCAGCTGGCCCAGCTCGGCATTACAACGTCGTCGAACTATCTCGATGGCGGGAAAT
TGATCATTGACGAGACGAAGCTGCGGGAGAAGATTAAAGAAAACCCGGAAGCGGTGTATCAGCTGTTTAACCAAAACGGC
ACGACGGACGCGGAAAAAGGCATTGCCCGCCGTTTGCGTGATACGATTAAAGAAACGATCGGGAAGATTGAGCAAAAGGC
CGGGAAGGCGCTTTGGACGAACCAGCAGTTTGCGATCGGGCGTGAGTTGATTCAAATCAATAATCAAATGGACCGGTTTG
AAGACCGTCTGAAACTGATCGAAGACCGCTACTACCGACAGTTTATGGCGATGGAAGAGGCGATTCAGCGCGCCAATCAG
CAAAGCATGTATTTAATGAACGCCTTCTTCGGCGGCATGCAAGGGTGA

Upstream 100 bases:

>100_bases
ACCGAAAAAGCTGTTGGATATGTATGCGGCGATGATGGAGTTTGTCGGATTGCTGGTGGATCGAAAAATTTAATGGTGGT
GAAGAAACGTGGCAGGGAAT

Downstream 100 bases:

>100_bases
TAGTGCATTGGACGGCCGTTTGATTAGATCAGGCGCGCCCAGTTGAGTGGTGAATGATGAGCAGGGGCTGGCTTCAGCGT
TTTTTGATTTTTTCATAACG

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MRISGLASGMDIDQIVKDLMRAERMPLDKLYQKKQLLEWQRDDYRAMNTLLQGLDDYLFSNITLQSSMLKKTISSSNEAV
VTATASASAANVATTIQVDQVATSAVWLSNVSVRKDDFSVDADTTLTIKVTNGDGSTNTVEITVKQGTTLDGLIAQLNSN
ANLGVSAFYDEQTGRISIMKKETGAQASLVLDDEETANFFAQKLGFTGAAAEQELTGKTEGQDAQVTINGLKTSRSSNTF
TINGVTYTVKGTGTATVSVETDVDAMVNVIKGFVDKYNEVVAKINAELKEERYRSYPPLTDEQKEAMTEKQIELWEEKAR
SGMLRGDSILSSALSQMRMDVYTKVEGANIPSGLSQLAQLGITTSSNYLDGGKLIIDETKLREKIKENPEAVYQLFNQNG
TTDAEKGIARRLRDTIKETIGKIEQKAGKALWTNQQFAIGRELIQINNQMDRFEDRLKLIEDRYYRQFMAMEEAIQRANQ
QSMYLMNAFFGGMQG

Sequences:

>Translated_495_residues
MRISGLASGMDIDQIVKDLMRAERMPLDKLYQKKQLLEWQRDDYRAMNTLLQGLDDYLFSNITLQSSMLKKTISSSNEAV
VTATASASAANVATTIQVDQVATSAVWLSNVSVRKDDFSVDADTTLTIKVTNGDGSTNTVEITVKQGTTLDGLIAQLNSN
ANLGVSAFYDEQTGRISIMKKETGAQASLVLDDEETANFFAQKLGFTGAAAEQELTGKTEGQDAQVTINGLKTSRSSNTF
TINGVTYTVKGTGTATVSVETDVDAMVNVIKGFVDKYNEVVAKINAELKEERYRSYPPLTDEQKEAMTEKQIELWEEKAR
SGMLRGDSILSSALSQMRMDVYTKVEGANIPSGLSQLAQLGITTSSNYLDGGKLIIDETKLREKIKENPEAVYQLFNQNG
TTDAEKGIARRLRDTIKETIGKIEQKAGKALWTNQQFAIGRELIQINNQMDRFEDRLKLIEDRYYRQFMAMEEAIQRANQ
QSMYLMNAFFGGMQG
>Mature_495_residues
MRISGLASGMDIDQIVKDLMRAERMPLDKLYQKKQLLEWQRDDYRAMNTLLQGLDDYLFSNITLQSSMLKKTISSSNEAV
VTATASASAANVATTIQVDQVATSAVWLSNVSVRKDDFSVDADTTLTIKVTNGDGSTNTVEITVKQGTTLDGLIAQLNSN
ANLGVSAFYDEQTGRISIMKKETGAQASLVLDDEETANFFAQKLGFTGAAAEQELTGKTEGQDAQVTINGLKTSRSSNTF
TINGVTYTVKGTGTATVSVETDVDAMVNVIKGFVDKYNEVVAKINAELKEERYRSYPPLTDEQKEAMTEKQIELWEEKAR
SGMLRGDSILSSALSQMRMDVYTKVEGANIPSGLSQLAQLGITTSSNYLDGGKLIIDETKLREKIKENPEAVYQLFNQNG
TTDAEKGIARRLRDTIKETIGKIEQKAGKALWTNQQFAIGRELIQINNQMDRFEDRLKLIEDRYYRQFMAMEEAIQRANQ
QSMYLMNAFFGGMQG

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=386, Percent_Identity=24.6113989637306, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 54830; Mature: 54830

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISGLASGMDIDQIVKDLMRAERMPLDKLYQKKQLLEWQRDDYRAMNTLLQGLDDYLFS
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NITLQSSMLKKTISSSNEAVVTATASASAANVATTIQVDQVATSAVWLSNVSVRKDDFSV
CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEHHHHHHHHHHHCCCEEECCCCCC
DADTTLTIKVTNGDGSTNTVEITVKQGTTLDGLIAQLNSNANLGVSAFYDEQTGRISIMK
CCCCEEEEEEECCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEEEE
KETGAQASLVLDDEETANFFAQKLGFTGAAAEQELTGKTEGQDAQVTINGLKTSRSSNTF
ECCCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCEEEEEEEECCCCCCEE
TINGVTYTVKGTGTATVSVETDVDAMVNVIKGFVDKYNEVVAKINAELKEERYRSYPPLT
EEEEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DEQKEAMTEKQIELWEEKARSGMLRGDSILSSALSQMRMDVYTKVEGANIPSGLSQLAQL
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHH
GITTSSNYLDGGKLIIDETKLREKIKENPEAVYQLFNQNGTTDAEKGIARRLRDTIKETI
CCCCCCCCCCCCEEEEEHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GKIEQKAGKALWTNQQFAIGRELIQINNQMDRFEDRLKLIEDRYYRQFMAMEEAIQRANQ
HHHHHHHCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
QSMYLMNAFFGGMQG
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MRISGLASGMDIDQIVKDLMRAERMPLDKLYQKKQLLEWQRDDYRAMNTLLQGLDDYLFS
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NITLQSSMLKKTISSSNEAVVTATASASAANVATTIQVDQVATSAVWLSNVSVRKDDFSV
CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEHHHHHHHHHHHCCCEEECCCCCC
DADTTLTIKVTNGDGSTNTVEITVKQGTTLDGLIAQLNSNANLGVSAFYDEQTGRISIMK
CCCCEEEEEEECCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEEEE
KETGAQASLVLDDEETANFFAQKLGFTGAAAEQELTGKTEGQDAQVTINGLKTSRSSNTF
ECCCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCEEEEEEEECCCCCCEE
TINGVTYTVKGTGTATVSVETDVDAMVNVIKGFVDKYNEVVAKINAELKEERYRSYPPLT
EEEEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DEQKEAMTEKQIELWEEKARSGMLRGDSILSSALSQMRMDVYTKVEGANIPSGLSQLAQL
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHH
GITTSSNYLDGGKLIIDETKLREKIKENPEAVYQLFNQNGTTDAEKGIARRLRDTIKETI
CCCCCCCCCCCCEEEEEHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GKIEQKAGKALWTNQQFAIGRELIQINNQMDRFEDRLKLIEDRYYRQFMAMEEAIQRANQ
HHHHHHHCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
QSMYLMNAFFGGMQG
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8195064; 9384377 [H]