| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is yugG [H]
Identifier: 138896519
GI number: 138896519
Start: 2992043
End: 2992543
Strand: Reverse
Name: yugG [H]
Synonym: GTNG_2882
Alternate gene names: 138896519
Gene position: 2992543-2992043 (Counterclockwise)
Preceding gene: 138896521
Following gene: 138896518
Centisome position: 84.29
GC content: 49.3
Gene sequence:
>501_bases ATGAAACTGAGCGATAAAGAACTGGAAATTATCGAAATATTGGAAAAAGATGCGCGGACTCCGATCGATGTGCTGGCGAA AATGATTGATTTGCCGGTGGAAGAAACAGAGGCGCTCGTCCACAAATTAGAAGAGGCGAACGTGATTGTCCAGTATACGA CGCTTGTCGATTGGCGGAAGGTCGATGGCCACGAAGGGGTGACGGCGATGATCGATGTGAAAGTCACCCCGAAGCGCGGC GTCGGCTTTGATGAGGTGGCAGAGCGCATTTACCGTTTCCCGGAAGTCAAATCGGTGTATTTAATGTCCGGCGCCTATGA TTTGTCGGTCGTCATTGAAGGGCGGTCGATGGCGGAAGTCGCCCAGTTTGTTTCGGAAAAACTGTCAACGCTTGATTCCG TCATTTCGACGACCACCCATTTCATTTTGAAAAAATATAAACATGACGGCACGATATTCGACAAAGGAGATCAAGATCGT CGCATCGTGGTGGCACCATGA
Upstream 100 bases:
>100_bases CTGCTCGAGCTGAAACGAACGGCATCTTGTTCATTCCCGGCATGACGACGGTCAGCCGGGCTGTCGGTTTAGCGAAACGG TTTAAAGGGAGGGATGTTCC
Downstream 100 bases:
>100_bases ATCCGCAAACGAAAAAAATGTATGTGTCAGAAACGGTTGCCAGCTTAAAGCCATCCGGCATCCGCCGGTTTTTCGATCTC GCTTCGAGCCTTGACGGTGT
Product: AsnC/Lrp family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MKLSDKELEIIEILEKDARTPIDVLAKMIDLPVEETEALVHKLEEANVIVQYTTLVDWRKVDGHEGVTAMIDVKVTPKRG VGFDEVAERIYRFPEVKSVYLMSGAYDLSVVIEGRSMAEVAQFVSEKLSTLDSVISTTTHFILKKYKHDGTIFDKGDQDR RIVVAP
Sequences:
>Translated_166_residues MKLSDKELEIIEILEKDARTPIDVLAKMIDLPVEETEALVHKLEEANVIVQYTTLVDWRKVDGHEGVTAMIDVKVTPKRG VGFDEVAERIYRFPEVKSVYLMSGAYDLSVVIEGRSMAEVAQFVSEKLSTLDSVISTTTHFILKKYKHDGTIFDKGDQDR RIVVAP >Mature_166_residues MKLSDKELEIIEILEKDARTPIDVLAKMIDLPVEETEALVHKLEEANVIVQYTTLVDWRKVDGHEGVTAMIDVKVTPKRG VGFDEVAERIYRFPEVKSVYLMSGAYDLSVVIEGRSMAEVAQFVSEKLSTLDSVISTTTHFILKKYKHDGTIFDKGDQDR RIVVAP
Specific function: Mediates A Global Response To Leucine. Exogenous Leucine Affects The Expression Of A Number Of Different Operons; Lrp Mediates This Effect For At Least Some Of These Operons. For Example It Is Regulator Of The Branched-Chain Amino Acid Transport Genes. [
COG id: COG1522
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 - InterPro: IPR000485 - InterPro: IPR019888 - InterPro: IPR019887 - InterPro: IPR011991 [H]
Pfam domain/function: PF01037 AsnC_trans_reg [H]
EC number: NA
Molecular weight: Translated: 18753; Mature: 18753
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS50956 HTH_ASNC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSDKELEIIEILEKDARTPIDVLAKMIDLPVEETEALVHKLEEANVIVQYTTLVDWRK CCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEEHHHHHC VDGHEGVTAMIDVKVTPKRGVGFDEVAERIYRFPEVKSVYLMSGAYDLSVVIEGRSMAEV CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCEEEEEEECCCCHHHH AQFVSEKLSTLDSVISTTTHFILKKYKHDGTIFDKGDQDRRIVVAP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECC >Mature Secondary Structure MKLSDKELEIIEILEKDARTPIDVLAKMIDLPVEETEALVHKLEEANVIVQYTTLVDWRK CCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEEHHHHHC VDGHEGVTAMIDVKVTPKRGVGFDEVAERIYRFPEVKSVYLMSGAYDLSVVIEGRSMAEV CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCEEEEEEECCCCHHHH AQFVSEKLSTLDSVISTTTHFILKKYKHDGTIFDKGDQDRRIVVAP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]