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The map label for this gene is sapB [H]

Identifier: 138896502

GI number: 138896502

Start: 2975204

End: 2975881

Strand: Direct

Name: sapB [H]

Synonym: GTNG_2865

Alternate gene names: 138896502

Gene position: 2975204-2975881 (Clockwise)

Preceding gene: 138896500

Following gene: 138896504

Centisome position: 83.8

GC content: 47.94

Gene sequence:

>678_bases
ATGGTGTTCGATCCGTTCCTCAAATTAGGGATTTCAGCCATCCTCGGGTTGATTATCGGGCTGGAACGGGAATTGAAACG
AAAACCAGTCGGTTTAAAAACGTGCCTTGTCATTTCCATTTCCAGCTGCTTGTTGACGATCGTTTCGATTGAATCAGCGT
ACATCTTCCCATCGAAAGATCATATTACGATGGATCCGCTCCGTCTGGCCGCCCAAATCGTATCCGGGGTCGGTTTTTTA
GGAGCTGGCGTGATTTTACGCCGCGGTAACGACAGCATCACCGGATTGACGACGGCTGCGATCATTTGGGGGGCCGCGGG
CATCGGGGTGGCCGTCGGCGCAGGCTTTTATTGGGAATCAGCGTTCGGTGTGGCGCTGCTCATTGTCAGTGTCGAACTCA
TTCCATTTTTAATTAATTTTTTCGGACCGAAGCAGCTGCGTGAAAAAGAAGTGATGCTGCAAATTACAGTCGCCGATGAA
AACAATATTACGAAAGTGATTGATCATTTAAAACAGCAGCACATCAATATTAAAACGATGCGCATTAAAGATGTGGAAGA
AAACCAGCATTTATTGAAACTAAGGGCTGTCGTCGACCAACGACGCTCGACCGCCGACATTTATTACACCATCCGCTCCA
TTGACGCGATCGTTCATGTCGATATTGAAAGCGGCTGA

Upstream 100 bases:

>100_bases
TCAATAAGGCGACATACGCCTTTGCCGAACTTGGCGGTTTCATCTCTCCATCTCCTTGCCAACTGTTTTCTTACATTATA
TCACGAACGAGGTGAGAAAA

Downstream 100 bases:

>100_bases
TAAAAAAAGATTGCCAACAGCCATTCATCTAGATATAATAGGAACTGGACAAATCATCCATATTCTTTTGGGGCATTAGC
TCAGTTGGGAGAGCGTCGTG

Product: SapB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MVFDPFLKLGISAILGLIIGLERELKRKPVGLKTCLVISISSCLLTIVSIESAYIFPSKDHITMDPLRLAAQIVSGVGFL
GAGVILRRGNDSITGLTTAAIIWGAAGIGVAVGAGFYWESAFGVALLIVSVELIPFLINFFGPKQLREKEVMLQITVADE
NNITKVIDHLKQQHINIKTMRIKDVEENQHLLKLRAVVDQRRSTADIYYTIRSIDAIVHVDIESG

Sequences:

>Translated_225_residues
MVFDPFLKLGISAILGLIIGLERELKRKPVGLKTCLVISISSCLLTIVSIESAYIFPSKDHITMDPLRLAAQIVSGVGFL
GAGVILRRGNDSITGLTTAAIIWGAAGIGVAVGAGFYWESAFGVALLIVSVELIPFLINFFGPKQLREKEVMLQITVADE
NNITKVIDHLKQQHINIKTMRIKDVEENQHLLKLRAVVDQRRSTADIYYTIRSIDAIVHVDIESG
>Mature_225_residues
MVFDPFLKLGISAILGLIIGLERELKRKPVGLKTCLVISISSCLLTIVSIESAYIFPSKDHITMDPLRLAAQIVSGVGFL
GAGVILRRGNDSITGLTTAAIIWGAAGIGVAVGAGFYWESAFGVALLIVSVELIPFLINFFGPKQLREKEVMLQITVADE
NNITKVIDHLKQQHINIKTMRIKDVEENQHLLKLRAVVDQRRSTADIYYTIRSIDAIVHVDIESG

Specific function: Unknown

COG id: COG1285

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MgtC/SapB family [H]

Homologues:

Organism=Escherichia coli, GI1789924, Length=189, Percent_Identity=36.5079365079365, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003416 [H]

Pfam domain/function: PF02308 MgtC [H]

EC number: NA

Molecular weight: Translated: 24664; Mature: 24664

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFDPFLKLGISAILGLIIGLERELKRKPVGLKTCLVISISSCLLTIVSIESAYIFPSKD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCC
HITMDPLRLAAQIVSGVGFLGAGVILRRGNDSITGLTTAAIIWGAAGIGVAVGAGFYWES
CCEEHHHHHHHHHHHCCCHHHCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHCCCHHHHH
AFGVALLIVSVELIPFLINFFGPKQLREKEVMLQITVADENNITKVIDHLKQQHINIKTM
HHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHCCCEEEE
RIKDVEENQHLLKLRAVVDQRRSTADIYYTIRSIDAIVHVDIESG
EEECCCCCHHHHHHHHHHHHCCCCHHEEEEEEEEEEEEEEEECCC
>Mature Secondary Structure
MVFDPFLKLGISAILGLIIGLERELKRKPVGLKTCLVISISSCLLTIVSIESAYIFPSKD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCC
HITMDPLRLAAQIVSGVGFLGAGVILRRGNDSITGLTTAAIIWGAAGIGVAVGAGFYWES
CCEEHHHHHHHHHHHCCCHHHCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHCCCHHHHH
AFGVALLIVSVELIPFLINFFGPKQLREKEVMLQITVADENNITKVIDHLKQQHINIKTM
HHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHCCCEEEE
RIKDVEENQHLLKLRAVVDQRRSTADIYYTIRSIDAIVHVDIESG
EEECCCCCHHHHHHHHHHHHCCCCHHEEEEEEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969499; 9384377; 9701819 [H]