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The map label for this gene is ssb [H]

Identifier: 138896484

GI number: 138896484

Start: 2956736

End: 2957233

Strand: Reverse

Name: ssb [H]

Synonym: GTNG_2847

Alternate gene names: 138896484

Gene position: 2957233-2956736 (Counterclockwise)

Preceding gene: 138896485

Following gene: 138896483

Centisome position: 83.29

GC content: 50.8

Gene sequence:

>498_bases
ATGATTAACCGCGTCATTTTGACAGGACGGCTGACGGACGATCCGCAGTTTCGGTATACGCCAAGCGGAGTGGCTGTTGT
CACATTCACACTGGCCGTTACCCGTCCGTTTGCGAATCAAAACGGGGTGCGGGAAGCTGATTTTATTCGTTGCGTCGCAT
GGCGAAAACAGGCGGAGAACATCGCAAACTACTTGAAAAAAGGAAGCATGGTCGGGATCGACGGGCGATTGGAAACGGGT
AGCTATGAACGGAACGGACGGAGGGTTTATTATACACAGGTCGTGGTGGATACGGCAACATTTCTGGAGCCGCGCAACGC
TTCGAATTCGGGCAGGAAACAGAGAGGGGATAGGGACACATTCGAACAAGAGAAAAACGCCTCTAGGAAAGCGAGAGAAG
CGTTTATGAAGCCGTCAGAAGAGCAGAGATGGTTTGATGATCCTTTTGCTGATAACGGGGAGCCGATCGAAATAAACGAT
GACGATTTGCCGTTTTGA

Upstream 100 bases:

>100_bases
GTGGATGGTGAGTGTTTGATAGAGATCAAAACCATAGAGAGCCGACCAAAAAAATTTGCGTATGTTGTGTTTGCCGAGAA
ATAGAAAGCGAGGGATTGTC

Downstream 100 bases:

>100_bases
CGAAAGGGATGGTAGAGGGTGAAGGGAACGGATAGAAAATGGTTCGATGGTGAAACGTCAATAGAGCCAGGAGATTGGGT
GTATTGCGTCAGCGTAAATA

Product: single-strand DNA binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MINRVILTGRLTDDPQFRYTPSGVAVVTFTLAVTRPFANQNGVREADFIRCVAWRKQAENIANYLKKGSMVGIDGRLETG
SYERNGRRVYYTQVVVDTATFLEPRNASNSGRKQRGDRDTFEQEKNASRKAREAFMKPSEEQRWFDDPFADNGEPIEIND
DDLPF

Sequences:

>Translated_165_residues
MINRVILTGRLTDDPQFRYTPSGVAVVTFTLAVTRPFANQNGVREADFIRCVAWRKQAENIANYLKKGSMVGIDGRLETG
SYERNGRRVYYTQVVVDTATFLEPRNASNSGRKQRGDRDTFEQEKNASRKAREAFMKPSEEQRWFDDPFADNGEPIEIND
DDLPF
>Mature_165_residues
MINRVILTGRLTDDPQFRYTPSGVAVVTFTLAVTRPFANQNGVREADFIRCVAWRKQAENIANYLKKGSMVGIDGRLETG
SYERNGRRVYYTQVVVDTATFLEPRNASNSGRKQRGDRDTFEQEKNASRKAREAFMKPSEEQRWFDDPFADNGEPIEIND
DDLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=173, Percent_Identity=29.4797687861272, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18905; Mature: 18905

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINRVILTGRLTDDPQFRYTPSGVAVVTFTLAVTRPFANQNGVREADFIRCVAWRKQAEN
CCCEEEEEEECCCCCCEEECCCCEEEEEEEEEHCCCCCCCCCCCHHHHHHHHHHHHHHHH
IANYLKKGSMVGIDGRLETGSYERNGRRVYYTQVVVDTATFLEPRNASNSGRKQRGDRDT
HHHHHHCCCEEECCCEECCCCCCCCCCEEEEEEEEEHHHHHCCCCCCCCCCCCCCCCCHH
FEQEKNASRKAREAFMKPSEEQRWFDDPFADNGEPIEINDDDLPF
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MINRVILTGRLTDDPQFRYTPSGVAVVTFTLAVTRPFANQNGVREADFIRCVAWRKQAEN
CCCEEEEEEECCCCCCEEECCCCEEEEEEEEEHCCCCCCCCCCCHHHHHHHHHHHHHHHH
IANYLKKGSMVGIDGRLETGSYERNGRRVYYTQVVVDTATFLEPRNASNSGRKQRGDRDT
HHHHHHCCCEEECCCEECCCCCCCCCCEEEEEEEEEHHHHHCCCCCCCCCCCCCCCCCHH
FEQEKNASRKAREAFMKPSEEQRWFDDPFADNGEPIEINDDDLPF
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]