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The map label for this gene is yjcR [H]

Identifier: 138896472

GI number: 138896472

Start: 2949042

End: 2949347

Strand: Reverse

Name: yjcR [H]

Synonym: GTNG_2835

Alternate gene names: 138896472

Gene position: 2949347-2949042 (Counterclockwise)

Preceding gene: 138896473

Following gene: 138896471

Centisome position: 83.07

GC content: 38.24

Gene sequence:

>306_bases
ATGAGAAGGTTGCCATCCAAAAAAAGTAATGTAACTACGGAAAAGTTTCAAAGATATAGGCATGGAAGTAGAAAGGGTGA
AGGAAATCTTAATCTCAAAAACCTATTCATAGAACGGAACTCAACAGTATTGAAGCAAGGCTTTTTTAGTGGCTACATAC
CCAAGGAAACACTGGAAATCATGAGAACCTTGGAAAAGAGCAATCCAGTAGAAATTTGGGACCAAATCATGATCCAATAC
GCAGCCATCATTCGAGTGCAGCAAATCATGTTCGTTGAAAGCAAAGAAGAGACATCAAAGAAGTGA

Upstream 100 bases:

>100_bases
GGATATTACACTTAAAAGCACTGGCCGAAGAAAAATACGGGGTTAGGCACATTACAAAGCCGAAAAAGCCTTGAAAAATG
GTCAAGGAATGTAACCAAAA

Downstream 100 bases:

>100_bases
AGAGAGAAAATGCCTTTCCAGCAAAACAGGTGATGGGACAGAAATTGAATATGAGTTCCGATGTGCATGGGAACGACGAG
CGAAGGAATCAGAAACAACA

Product: YqaS-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MRRLPSKKSNVTTEKFQRYRHGSRKGEGNLNLKNLFIERNSTVLKQGFFSGYIPKETLEIMRTLEKSNPVEIWDQIMIQY
AAIIRVQQIMFVESKEETSKK

Sequences:

>Translated_101_residues
MRRLPSKKSNVTTEKFQRYRHGSRKGEGNLNLKNLFIERNSTVLKQGFFSGYIPKETLEIMRTLEKSNPVEIWDQIMIQY
AAIIRVQQIMFVESKEETSKK
>Mature_101_residues
MRRLPSKKSNVTTEKFQRYRHGSRKGEGNLNLKNLFIERNSTVLKQGFFSGYIPKETLEIMRTLEKSNPVEIWDQIMIQY
AAIIRVQQIMFVESKEETSKK

Specific function: Unknown

COG id: COG5484

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018925 [H]

Pfam domain/function: PF10668 Phage_terminase [H]

EC number: NA

Molecular weight: Translated: 11939; Mature: 11939

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLPSKKSNVTTEKFQRYRHGSRKGEGNLNLKNLFIERNSTVLKQGFFSGYIPKETLEI
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHEEEECCCHHHHHHHHCCCCCHHHHHH
MRTLEKSNPVEIWDQIMIQYAAIIRVQQIMFVESKEETSKK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
>Mature Secondary Structure
MRRLPSKKSNVTTEKFQRYRHGSRKGEGNLNLKNLFIERNSTVLKQGFFSGYIPKETLEI
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHEEEECCCHHHHHHHHCCCCCHHHHHH
MRTLEKSNPVEIWDQIMIQYAAIIRVQQIMFVESKEETSKK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]