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The map label for this gene is ytxM [H]

Identifier: 138896409

GI number: 138896409

Start: 2885467

End: 2886267

Strand: Reverse

Name: ytxM [H]

Synonym: GTNG_2772

Alternate gene names: 138896409

Gene position: 2886267-2885467 (Counterclockwise)

Preceding gene: 138896410

Following gene: 138896408

Centisome position: 81.3

GC content: 54.93

Gene sequence:

>801_bases
ATGGAATTGAATGGAATCCGTTACCATGTAGAACAATATGGGGAAGGGGAGCCGTTATTGCTGTTGCACGGGTTTACCGG
CAGTGCGGATACGTGGCGGCCACTCCTTCGTTCTTGGGGAGACTTCCGTCTCATTGCCGTCGATCTAATAGGGCACGGGC
GGACGGAGGCGCCAAAGAGCGTTGAGCGGTATCAAATGAAACAGGCAGCGGCCGACTTGGCGGCACTTCTTGATGCACTT
CGTATCGAAAAAGCAAACGTGCTTGGTTATTCGATGGGCGGGCGGCTTGCTTTAAGCTTTGCTATATGGTATCCGCACCG
CCTCCGCCGTTTAGTGCTCGAAAGCAGCTCGCCCGGGTTGAAGACGGAAGCGGAGCGGCGCGCGCGGCAAGAAGCCGATG
AGGCGCTCGCGCAAATGATTGAACGAAACGGCGTGCGTGCATTTGTCGATTATTGGGAACAGCTCCCGTTGTTTGCGACC
CAAAAGAAACTCCCGAAGCCCGTGCAGGATGCCATTCGTCGTGAGCGGCTTCGCCATACGGAGCGAGGACTCGCCAACAG
TTTGCGCGGAATGGGAACGGGCGTGCAGCCGTCATGGTGGGATCGGCTTGGGGAGGTCAAAGTGCCTGTGTTGCTTCTTT
GCGGGGAGTACGATGAGAAATTTTGCCGCATCGCTGCCGACATGCATGAACGACTCCCAAACAGCGAACTCGTCTGTGTC
CAAAAGGTCGGACATGCAATTCATGTGGAACAACCCGGCATTTTTGCTAAAATAGTAAGTGAATTGATTAAAAGGGGGTA
G

Upstream 100 bases:

>100_bases
GCACGTCGCGCACAGAAAATGTCCAAATGCATCGATTTTTGTGGGAACGTGTTTCCCAGGAAATCGCCAAATTTCTCGAA
CAAAAAGGAACGGAAGAACC

Downstream 100 bases:

>100_bases
TATGAATGCCGTTTGAATGGGTAAAAGAACACGATTATGAAGATATTATTTACGAAACGTACAACGGCATCGCTAAAATT
ACGATCAATCGTCCGGAAGT

Product: menaquinone biosynthesis related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MELNGIRYHVEQYGEGEPLLLLHGFTGSADTWRPLLRSWGDFRLIAVDLIGHGRTEAPKSVERYQMKQAAADLAALLDAL
RIEKANVLGYSMGGRLALSFAIWYPHRLRRLVLESSSPGLKTEAERRARQEADEALAQMIERNGVRAFVDYWEQLPLFAT
QKKLPKPVQDAIRRERLRHTERGLANSLRGMGTGVQPSWWDRLGEVKVPVLLLCGEYDEKFCRIAADMHERLPNSELVCV
QKVGHAIHVEQPGIFAKIVSELIKRG

Sequences:

>Translated_266_residues
MELNGIRYHVEQYGEGEPLLLLHGFTGSADTWRPLLRSWGDFRLIAVDLIGHGRTEAPKSVERYQMKQAAADLAALLDAL
RIEKANVLGYSMGGRLALSFAIWYPHRLRRLVLESSSPGLKTEAERRARQEADEALAQMIERNGVRAFVDYWEQLPLFAT
QKKLPKPVQDAIRRERLRHTERGLANSLRGMGTGVQPSWWDRLGEVKVPVLLLCGEYDEKFCRIAADMHERLPNSELVCV
QKVGHAIHVEQPGIFAKIVSELIKRG
>Mature_266_residues
MELNGIRYHVEQYGEGEPLLLLHGFTGSADTWRPLLRSWGDFRLIAVDLIGHGRTEAPKSVERYQMKQAAADLAALLDAL
RIEKANVLGYSMGGRLALSFAIWYPHRLRRLVLESSSPGLKTEAERRARQEADEALAQMIERNGVRAFVDYWEQLPLFAT
QKKLPKPVQDAIRRERLRHTERGLANSLRGMGTGVQPSWWDRLGEVKVPVLLLCGEYDEKFCRIAADMHERLPNSELVCV
QKVGHAIHVEQPGIFAKIVSELIKRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]

Homologues:

Organism=Homo sapiens, GI218777837, Length=124, Percent_Identity=37.0967741935484, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI27597073, Length=107, Percent_Identity=34.5794392523364, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI218777840, Length=118, Percent_Identity=34.7457627118644, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI13376164, Length=118, Percent_Identity=34.7457627118644, Blast_Score=69, Evalue=5e-12,
Organism=Escherichia coli, GI1788598, Length=260, Percent_Identity=30, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1786902, Length=195, Percent_Identity=26.6666666666667, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI87081721, Length=280, Percent_Identity=26.0714285714286, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787244, Length=249, Percent_Identity=26.1044176706827, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17554012, Length=115, Percent_Identity=30.4347826086957, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639
- InterPro:   IPR022485 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 30157; Mature: 30157

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELNGIRYHVEQYGEGEPLLLLHGFTGSADTWRPLLRSWGDFRLIAVDLIGHGRTEAPKS
CCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCHHH
VERYQMKQAAADLAALLDALRIEKANVLGYSMGGRLALSFAIWYPHRLRRLVLESSSPGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEHHHHHHHHHHHHHHHHCCCCCC
KTEAERRARQEADEALAQMIERNGVRAFVDYWEQLPLFATQKKLPKPVQDAIRRERLRHT
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHH
ERGLANSLRGMGTGVQPSWWDRLGEVKVPVLLLCGEYDEKFCRIAADMHERLPNSELVCV
HHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEHH
QKVGHAIHVEQPGIFAKIVSELIKRG
HHHCCEEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MELNGIRYHVEQYGEGEPLLLLHGFTGSADTWRPLLRSWGDFRLIAVDLIGHGRTEAPKS
CCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCHHH
VERYQMKQAAADLAALLDALRIEKANVLGYSMGGRLALSFAIWYPHRLRRLVLESSSPGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEHHHHHHHHHHHHHHHHCCCCCC
KTEAERRARQEADEALAQMIERNGVRAFVDYWEQLPLFATQKKLPKPVQDAIRRERLRHT
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHH
ERGLANSLRGMGTGVQPSWWDRLGEVKVPVLLLCGEYDEKFCRIAADMHERLPNSELVCV
HHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEHH
QKVGHAIHVEQPGIFAKIVSELIKRG
HHHCCEEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8566759; 9387221; 9384377 [H]