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The map label for this gene is ytqB [H]

Identifier: 138896384

GI number: 138896384

Start: 2865376

End: 2865951

Strand: Direct

Name: ytqB [H]

Synonym: GTNG_2747

Alternate gene names: 138896384

Gene position: 2865376-2865951 (Clockwise)

Preceding gene: 138896383

Following gene: 138896386

Centisome position: 80.71

GC content: 53.3

Gene sequence:

>576_bases
ATGACATTGATGAACATTTTGCCGTTTGCCCGCTTTTTGCTTGAACGTGCCGTCACAGAAGGCGATCTTGCCATCGACGC
AACGGTCGGCAACGGCCATGACACCGTCTACCTTGCGGAACTCGTCGGTGATAGCGGACATGTGTTCGGATTTGACATTC
AACCGGAGGCCATCGCAGCGACAACAGCCCGCCTTTCTGAACAAGGGCTGCTCGACCGGGTCACGTTATTCCAACAAAGC
CATAGCGAGCTGCTCACAGCGCTTCCTAGCGATGTGTATGGACGGATTGGTGGAGCCGTTTTCAACCTCGGCTATTTGCC
GGGCGGTGATAAACAGATTGTCACCCAACCGGAATACGCACGATTCAGCCGGATCTCTAGATTCCTTTCCATCATGAAGC
CGGGCGGCGTCATCGTTCTTGTCGTTTACCACGGCCATCCGGAAGGAAAAATCGAACGTGACGCGTTGCTTGATTATGTG
CGTTCCCTCGACCAGCAACACACCCACGTACTCAAATACGAATTCTTGAATCGGCGCAACGATCCGCCGTTTATTATCGC
GCTCGAAAAGCGATAG

Upstream 100 bases:

>100_bases
GGAGCGCCAACAAATGGGAAGTGTTAAACGCCATTGACGCCGAACTCAAGCGGCGCAACAGCTATCAAGGAAAACGGTAC
AAACAAGAGGTGACGACCCG

Downstream 100 bases:

>100_bases
GCGGAGACGTCTCCCTTTCGCCGATCCATCATCAAGCAATAAACGGCTGTCTTTATGAAAAAGACAGCCGTTTTTGTTTC
TCCTGCCAAAAGCGATACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MTLMNILPFARFLLERAVTEGDLAIDATVGNGHDTVYLAELVGDSGHVFGFDIQPEAIAATTARLSEQGLLDRVTLFQQS
HSELLTALPSDVYGRIGGAVFNLGYLPGGDKQIVTQPEYARFSRISRFLSIMKPGGVIVLVVYHGHPEGKIERDALLDYV
RSLDQQHTHVLKYEFLNRRNDPPFIIALEKR

Sequences:

>Translated_191_residues
MTLMNILPFARFLLERAVTEGDLAIDATVGNGHDTVYLAELVGDSGHVFGFDIQPEAIAATTARLSEQGLLDRVTLFQQS
HSELLTALPSDVYGRIGGAVFNLGYLPGGDKQIVTQPEYARFSRISRFLSIMKPGGVIVLVVYHGHPEGKIERDALLDYV
RSLDQQHTHVLKYEFLNRRNDPPFIIALEKR
>Mature_190_residues
TLMNILPFARFLLERAVTEGDLAIDATVGNGHDTVYLAELVGDSGHVFGFDIQPEAIAATTARLSEQGLLDRVTLFQQSH
SELLTALPSDVYGRIGGAVFNLGYLPGGDKQIVTQPEYARFSRISRFLSIMKPGGVIVLVVYHGHPEGKIERDALLDYVR
SLDQQHTHVLKYEFLNRRNDPPFIIALEKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010719 [H]

Pfam domain/function: PF06962 rRNA_methylase [H]

EC number: NA

Molecular weight: Translated: 21249; Mature: 21117

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLMNILPFARFLLERAVTEGDLAIDATVGNGHDTVYLAELVGDSGHVFGFDIQPEAIAA
CCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEECCCHHHHH
TTARLSEQGLLDRVTLFQQSHSELLTALPSDVYGRIGGAVFNLGYLPGGDKQIVTQPEYA
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHEEECCCCCCCCEEEECCHHH
RFSRISRFLSIMKPGGVIVLVVYHGHPEGKIERDALLDYVRSLDQQHTHVLKYEFLNRRN
HHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DPPFIIALEKR
CCCEEEEEECC
>Mature Secondary Structure 
TLMNILPFARFLLERAVTEGDLAIDATVGNGHDTVYLAELVGDSGHVFGFDIQPEAIAA
CHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEECCCHHHHH
TTARLSEQGLLDRVTLFQQSHSELLTALPSDVYGRIGGAVFNLGYLPGGDKQIVTQPEYA
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHEEECCCCCCCCEEEECCHHH
RFSRISRFLSIMKPGGVIVLVVYHGHPEGKIERDALLDYVRSLDQQHTHVLKYEFLNRRN
HHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DPPFIIALEKR
CCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]