| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
Click here to switch to the map view.
The map label for this gene is sasP-1 [H]
Identifier: 138896334
GI number: 138896334
Start: 2806108
End: 2806314
Strand: Reverse
Name: sasP-1 [H]
Synonym: GTNG_2697
Alternate gene names: 138896334
Gene position: 2806314-2806108 (Counterclockwise)
Preceding gene: 138896335
Following gene: 138896333
Centisome position: 79.04
GC content: 51.69
Gene sequence:
>207_bases ATGGCACGCAACAACAACAGCAATCAATTGCTTGTTCCGGGCGCACAACAAGCGCTTGAGCAAATGAAATATGAAATCGC CCAAGAATTCGGCGTCAACTTAGGCGCTGACACGACATCGCGCGCTAACGGTTCGGTCGGCGGCGAGATTACGAAACGTC TTGTCGCTATGGCGCAACAACAATTGGGCGGTGCACGTCAATTCTAA
Upstream 100 bases:
>100_bases GTTCACTGCGCTGTTTTAAATCTCAAAATTTACCAAACATGTTGTTGCATATTGCTGTCTGTTTTCACACATTCTATACG TACAAAGGAGGTGAAAACAG
Downstream 100 bases:
>100_bases TTTTATAATGATGGCTTACGCGGCGGGGAGCTCCCCGCCGTTTGTTATGACAAAAGTATTCAAAATATAATAATTATTTT GTATAATAAAAGGTGTCGGA
Product: small acid-soluble spore protein
Products: NA
Alternate protein names: SASP [H]
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MARNNNSNQLLVPGAQQALEQMKYEIAQEFGVNLGADTTSRANGSVGGEITKRLVAMAQQQLGGARQF
Sequences:
>Translated_68_residues MARNNNSNQLLVPGAQQALEQMKYEIAQEFGVNLGADTTSRANGSVGGEITKRLVAMAQQQLGGARQF >Mature_67_residues ARNNNSNQLLVPGAQQALEQMKYEIAQEFGVNLGADTTSRANGSVGGEITKRLVAMAQQQLGGARQF
Specific function: SASP are bound to spore DNA. They are double-stranded DNA-binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to U
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha/beta-type SASP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001448 - InterPro: IPR018126 [H]
Pfam domain/function: PF00269 SASP [H]
EC number: NA
Molecular weight: Translated: 7279; Mature: 7148
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS00304 SASP_1 ; PS00684 SASP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARNNNSNQLLVPGAQQALEQMKYEIAQEFGVNLGADTTSRANGSVGGEITKRLVAMAQQ CCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH QLGGARQF HHCCCCCC >Mature Secondary Structure ARNNNSNQLLVPGAQQALEQMKYEIAQEFGVNLGADTTSRANGSVGGEITKRLVAMAQQ CCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH QLGGARQF HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3087949 [H]