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The map label for this gene is ysdA [H]

Identifier: 138896276

GI number: 138896276

Start: 2748154

End: 2748405

Strand: Reverse

Name: ysdA [H]

Synonym: GTNG_2639

Alternate gene names: 138896276

Gene position: 2748405-2748154 (Counterclockwise)

Preceding gene: 138896277

Following gene: 138896275

Centisome position: 77.41

GC content: 52.38

Gene sequence:

>252_bases
ATGATACAATATGCAATAGCCGTCAATCTTCTCGCTTTTTTTGCCATGGGGCTTGATAAATATAAGGCGAGACGCCATCG
TTTTCGCATCGCTGAGCGGACGCTTTGGCTGCTGGCGTGGTTGGGTGGAGCTTTCGGAGCTATGGCGGGCATGTATACGT
TTCGCCATAAAACGCGCCATCGCGTGTTTCGATACGGCTTGCCGCTGTTGGCAGCGGCGGAGTTCGTTGTTTATTGGCTG
TGGATGAGGTAG

Upstream 100 bases:

>100_bases
GACTTGGCAAAAGCGAACTTGAATAAGTAATACGAATGGCCATCCTGAACGGGGATGGCCGTTTTTATTTACATAGGAAA
TGGAGTGAGGGAGGGGCCTT

Downstream 100 bases:

>100_bases
AAAGGGGAGAAGAGAATGAACTGGCCTTTGCTTTACGACATGCAACGCGAGTTAGACACACGCATTGAAACGCAGCACGG
CCTAGAGGCTGAAGATTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MIQYAIAVNLLAFFAMGLDKYKARRHRFRIAERTLWLLAWLGGAFGAMAGMYTFRHKTRHRVFRYGLPLLAAAEFVVYWL
WMR

Sequences:

>Translated_83_residues
MIQYAIAVNLLAFFAMGLDKYKARRHRFRIAERTLWLLAWLGGAFGAMAGMYTFRHKTRHRVFRYGLPLLAAAEFVVYWL
WMR
>Mature_83_residues
MIQYAIAVNLLAFFAMGLDKYKARRHRFRIAERTLWLLAWLGGAFGAMAGMYTFRHKTRHRVFRYGLPLLAAAEFVVYWL
WMR

Specific function: Unknown

COG id: COG3326

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010718 [H]

Pfam domain/function: PF06961 DUF1294 [H]

EC number: NA

Molecular weight: Translated: 9886; Mature: 9886

Theoretical pI: Translated: 11.72; Mature: 11.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQYAIAVNLLAFFAMGLDKYKARRHRFRIAERTLWLLAWLGGAFGAMAGMYTFRHKTRH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVFRYGLPLLAAAEFVVYWLWMR
HHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIQYAIAVNLLAFFAMGLDKYKARRHRFRIAERTLWLLAWLGGAFGAMAGMYTFRHKTRH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVFRYGLPLLAAAEFVVYWLWMR
HHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]