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The map label for this gene is ssuC [H]

Identifier: 138896247

GI number: 138896247

Start: 2717689

End: 2718474

Strand: Reverse

Name: ssuC [H]

Synonym: GTNG_2610

Alternate gene names: 138896247

Gene position: 2718474-2717689 (Counterclockwise)

Preceding gene: 138896248

Following gene: 138896246

Centisome position: 76.57

GC content: 50.25

Gene sequence:

>786_bases
ATGAAAGAGTCCAAGAAGGTGAAATGGATTCATGAAAAGGTGGTACCATGGGGACTGCCGATCGTCTTGCTCGTTGCATG
GCAGGGGGCAGTGGAGGCGGGATGGCTATCTTCAAGAGTGCTGCCGGCTCCGACTGACGTGGTGGCGGCTGCTTGGGATC
TCTTAGAAAAAGGAGAGTTATGGCAACATTTATCGATCAGTTTTGGGCGTGCATTGATTGGATTTGCTATCGGCGGGTCA
CTCGGCTTTGTTCTTGGCTTGCTCAACGGGGTCTTTCGGCCGGCCGAACGATTGTTGGATACTTCAATCCAGATGATTCG
AAATATTCCGCATTTGGCGATGATTCCGCTCGTCATTTTATGGTTTGGCATTGGGGAAGAAGCGAAAGTGTTTCTCGTTG
CCATCGGGGTGCTTTTTCCAATTTATGTCAATACATTACATGGCATTCGCAATGTGGATGCGGGATTGTTGGAAATGGGT
CGTGTCTATGGGCTTCGCCCGTGGCAGTTGTTTTGGCGTATTTGGCTGCCGGGCGCGTTATCGTCGATTTTGGTCGGTCT
GCGCTATGCGCTGGGCATTATGTGGTTGACGTTAATCGTAGCGGAGACGATCGCTGCTGACCGCGGCATCGGGTATTTGG
CCATGAATGCACGTGAATTTATGCAAACGGATGTCGTTGTGTTCAGTATTTTGCTTTACGCGCTGTTTGGCAAGCTCGCA
GACAGCATTGCCCGCTTTTTGGAAAAACGCTGGCTTCGCTGGAATGTCAACTATCAAAATCGGTAA

Upstream 100 bases:

>100_bases
ACGAGAGCACTTTATTGGGGGAAATGGCTGTTTTTCACTAGCCTTTTAAGGTTTCGTAGGATGGGGGCTGGATGAGAAGA
GGAAAGGGAGTGATGGAAGA

Downstream 100 bases:

>100_bases
CTGACACAAACGGAGTGGGAAAGGAGAGCGAGAGATGGAAACAGGACGAGGAGCAGAGCTCGTATTTGTGCAAGTGGCCA
AACAGTTTGGCGATCAACAA

Product: putative aliphatic sulfonates ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKESKKVKWIHEKVVPWGLPIVLLVAWQGAVEAGWLSSRVLPAPTDVVAAAWDLLEKGELWQHLSISFGRALIGFAIGGS
LGFVLGLLNGVFRPAERLLDTSIQMIRNIPHLAMIPLVILWFGIGEEAKVFLVAIGVLFPIYVNTLHGIRNVDAGLLEMG
RVYGLRPWQLFWRIWLPGALSSILVGLRYALGIMWLTLIVAETIAADRGIGYLAMNAREFMQTDVVVFSILLYALFGKLA
DSIARFLEKRWLRWNVNYQNR

Sequences:

>Translated_261_residues
MKESKKVKWIHEKVVPWGLPIVLLVAWQGAVEAGWLSSRVLPAPTDVVAAAWDLLEKGELWQHLSISFGRALIGFAIGGS
LGFVLGLLNGVFRPAERLLDTSIQMIRNIPHLAMIPLVILWFGIGEEAKVFLVAIGVLFPIYVNTLHGIRNVDAGLLEMG
RVYGLRPWQLFWRIWLPGALSSILVGLRYALGIMWLTLIVAETIAADRGIGYLAMNAREFMQTDVVVFSILLYALFGKLA
DSIARFLEKRWLRWNVNYQNR
>Mature_261_residues
MKESKKVKWIHEKVVPWGLPIVLLVAWQGAVEAGWLSSRVLPAPTDVVAAAWDLLEKGELWQHLSISFGRALIGFAIGGS
LGFVLGLLNGVFRPAERLLDTSIQMIRNIPHLAMIPLVILWFGIGEEAKVFLVAIGVLFPIYVNTLHGIRNVDAGLLEMG
RVYGLRPWQLFWRIWLPGALSSILVGLRYALGIMWLTLIVAETIAADRGIGYLAMNAREFMQTDVVVFSILLYALFGKLA
DSIARFLEKRWLRWNVNYQNR

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=252, Percent_Identity=66.6666666666667, Blast_Score=304, Evalue=5e-84,
Organism=Escherichia coli, GI1786564, Length=266, Percent_Identity=32.3308270676692, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1789033, Length=165, Percent_Identity=27.8787878787879, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29346; Mature: 29346

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKESKKVKWIHEKVVPWGLPIVLLVAWQGAVEAGWLSSRVLPAPTDVVAAAWDLLEKGEL
CCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCHHCCCCCCCCHHHHHHHHHHHHHHHH
WQHLSISFGRALIGFAIGGSLGFVLGLLNGVFRPAERLLDTSIQMIRNIPHLAMIPLVIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
WFGIGEEAKVFLVAIGVLFPIYVNTLHGIRNVDAGLLEMGRVYGLRPWQLFWRIWLPGAL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
SSILVGLRYALGIMWLTLIVAETIAADRGIGYLAMNAREFMQTDVVVFSILLYALFGKLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
DSIARFLEKRWLRWNVNYQNR
HHHHHHHHHHHHEECCCCCCC
>Mature Secondary Structure
MKESKKVKWIHEKVVPWGLPIVLLVAWQGAVEAGWLSSRVLPAPTDVVAAAWDLLEKGEL
CCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCHHCCCCCCCCHHHHHHHHHHHHHHHH
WQHLSISFGRALIGFAIGGSLGFVLGLLNGVFRPAERLLDTSIQMIRNIPHLAMIPLVIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
WFGIGEEAKVFLVAIGVLFPIYVNTLHGIRNVDAGLLEMGRVYGLRPWQLFWRIWLPGAL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
SSILVGLRYALGIMWLTLIVAETIAADRGIGYLAMNAREFMQTDVVVFSILLYALFGKLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
DSIARFLEKRWLRWNVNYQNR
HHHHHHHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]